Result of FASTA (omim) for
pF1KB8714
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8714, 443 aa
1>>>pF1KB8714 443 - 443 aa - 443 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.6359+/-0.000515; mu= -22.7105+/- 0.032
mean_var=756.2225+/-155.085, 0's: 0 Z-trim(124.7): 411 B-trim: 771 in 1/60
Lambda= 0.046639
statistics sampled from 46494 (46955) to 46494 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.551), width: 16
Scan time: 11.060
The best scores are: opt bits E(85289)
NP_597712 (OMIM: 608926) EMI domain-containing pro ( 443) 3265 234.5 4.3e-61
NP_001254824 (OMIM: 608926) EMI domain-containing ( 441) 3241 232.9 1.3e-60
XP_005261385 (OMIM: 608926) PREDICTED: EMI domain- ( 445) 3120 224.7 3.7e-58
XP_005261386 (OMIM: 608926) PREDICTED: EMI domain- ( 417) 2153 159.6 1.4e-38
XP_011528171 (OMIM: 608926) PREDICTED: EMI domain- ( 460) 1883 141.5 4.3e-33
XP_011528177 (OMIM: 608926) PREDICTED: EMI domain- ( 307) 1738 131.6 2.9e-30
XP_011528176 (OMIM: 608926) PREDICTED: EMI domain- ( 397) 1738 131.7 3.4e-30
XP_016884078 (OMIM: 608926) PREDICTED: EMI domain- ( 397) 1738 131.7 3.4e-30
XP_011528173 (OMIM: 608926) PREDICTED: EMI domain- ( 434) 1738 131.7 3.6e-30
XP_011528170 (OMIM: 608926) PREDICTED: EMI domain- ( 462) 1738 131.8 3.8e-30
XP_011528178 (OMIM: 608926) PREDICTED: EMI domain- ( 283) 1720 130.3 6.2e-30
XP_011528175 (OMIM: 608926) PREDICTED: EMI domain- ( 420) 1597 122.2 2.5e-27
XP_011528174 (OMIM: 608926) PREDICTED: EMI domain- ( 423) 1469 113.6 1e-24
XP_011528172 (OMIM: 608926) PREDICTED: EMI domain- ( 438) 1436 111.4 4.8e-24
XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715) 670 60.5 4e-08
NP_000084 (OMIM: 120215,130000) collagen alpha-1(V (1838) 670 60.5 4.2e-08
NP_001265003 (OMIM: 120215,130000) collagen alpha- (1838) 670 60.5 4.2e-08
NP_000081 (OMIM: 120180,130020,130050) collagen al (1466) 637 58.2 1.7e-07
XP_016855830 (OMIM: 120326) PREDICTED: collagen al (1028) 613 56.4 4e-07
XP_016855829 (OMIM: 120326) PREDICTED: collagen al (1077) 613 56.5 4.1e-07
XP_011539030 (OMIM: 120326) PREDICTED: collagen al (1089) 613 56.5 4.1e-07
XP_011539029 (OMIM: 120326) PREDICTED: collagen al (1302) 613 56.5 4.7e-07
XP_011539028 (OMIM: 120326) PREDICTED: collagen al (1402) 613 56.6 4.9e-07
XP_011539026 (OMIM: 120326) PREDICTED: collagen al (1563) 613 56.6 5.3e-07
XP_011539025 (OMIM: 120326) PREDICTED: collagen al (1573) 613 56.6 5.3e-07
XP_005270538 (OMIM: 120326) PREDICTED: collagen al (1588) 613 56.6 5.4e-07
XP_011539024 (OMIM: 120326) PREDICTED: collagen al (1589) 613 56.6 5.4e-07
XP_016855828 (OMIM: 120326) PREDICTED: collagen al (1592) 613 56.6 5.4e-07
XP_016855827 (OMIM: 120326) PREDICTED: collagen al (1593) 613 56.6 5.4e-07
NP_001847 (OMIM: 120326) collagen alpha-1(XVI) cha (1604) 613 56.6 5.4e-07
XP_016884751 (OMIM: 301050,303630) PREDICTED: coll (1289) 604 55.9 7.1e-07
XP_016870728 (OMIM: 608461,615155) PREDICTED: coll (1214) 603 55.8 7.1e-07
XP_016884750 (OMIM: 301050,303630) PREDICTED: coll (1330) 604 55.9 7.2e-07
XP_011517446 (OMIM: 608461,615155) PREDICTED: coll (1352) 603 55.9 7.7e-07
XP_011517445 (OMIM: 608461,615155) PREDICTED: coll (1353) 603 55.9 7.7e-07
XP_011517444 (OMIM: 608461,615155) PREDICTED: coll (1401) 603 55.9 7.9e-07
XP_016874320 (OMIM: 108300,120140,132450,150600,15 (1305) 600 55.7 8.6e-07
XP_011539019 (OMIM: 120260,600204,603932,614284) P ( 508) 586 54.3 8.7e-07
NP_149162 (OMIM: 108300,120140,132450,150600,15121 (1418) 600 55.7 9.1e-07
XP_016871181 (OMIM: 120350,616720) PREDICTED: coll ( 651) 588 54.5 9.4e-07
XP_016874317 (OMIM: 108300,120140,132450,150600,15 (1535) 600 55.7 9.6e-07
XP_016855822 (OMIM: 120260,600204,603932,614284) P ( 595) 586 54.4 9.7e-07
XP_011539018 (OMIM: 120260,600204,603932,614284) P ( 599) 586 54.4 9.7e-07
XP_011539017 (OMIM: 120260,600204,603932,614284) P ( 599) 586 54.4 9.7e-07
XP_016855821 (OMIM: 120260,600204,603932,614284) P ( 693) 586 54.4 1.1e-06
NP_542992 (OMIM: 120350,616720) collagen alpha-1(X ( 668) 585 54.4 1.1e-06
XP_016858786 (OMIM: 120131,203780) PREDICTED: coll (1651) 598 55.6 1.1e-06
XP_016871173 (OMIM: 120350,616720) PREDICTED: coll ( 680) 585 54.4 1.1e-06
XP_011508859 (OMIM: 120131,203780) PREDICTED: coll (1663) 598 55.6 1.1e-06
XP_016871182 (OMIM: 120350,616720) PREDICTED: coll ( 649) 584 54.3 1.1e-06
>>NP_597712 (OMIM: 608926) EMI domain-containing protein (443 aa)
initn: 3265 init1: 3265 opt: 3265 Z-score: 1217.8 bits: 234.5 E(85289): 4.3e-61
Smith-Waterman score: 3265; 100.0% identity (100.0% similar) in 443 aa overlap (1-443:1-443)
10 20 30 40 50 60
pF1KB8 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 PGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTPSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 PGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTPSLL
370 380 390 400 410 420
430 440
pF1KB8 RGKRGGHATNYRIVAPRSRDERG
:::::::::::::::::::::::
NP_597 RGKRGGHATNYRIVAPRSRDERG
430 440
>>NP_001254824 (OMIM: 608926) EMI domain-containing prot (441 aa)
initn: 2466 init1: 2466 opt: 3241 Z-score: 1209.1 bits: 232.9 E(85289): 1.3e-60
Smith-Waterman score: 3241; 99.5% identity (99.5% similar) in 443 aa overlap (1-443:1-441)
10 20 30 40 50 60
pF1KB8 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
:::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEE--ASSASLEPMWSG
70 80 90 100 110
130 140 150 160 170 180
pF1KB8 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB8 PGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTPSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTPSLL
360 370 380 390 400 410
430 440
pF1KB8 RGKRGGHATNYRIVAPRSRDERG
:::::::::::::::::::::::
NP_001 RGKRGGHATNYRIVAPRSRDERG
420 430 440
>>XP_005261385 (OMIM: 608926) PREDICTED: EMI domain-cont (445 aa)
initn: 2827 init1: 2827 opt: 3120 Z-score: 1165.0 bits: 224.7 E(85289): 3.7e-58
Smith-Waterman score: 3120; 95.3% identity (97.5% similar) in 446 aa overlap (1-443:1-445)
10 20 30 40 50 60
pF1KB8 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
310 320 330 340 350 360
370 380 390 400 410
pF1KB8 PGPKGDPGEKSHWGEGLH---QLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTP
:::::::::::::. .:. : . :..::.:: .::..: ::::::::::::::::
XP_005 PGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAII-WPEPELGSGAGPAGTGTP
370 380 390 400 410
420 430 440
pF1KB8 SLLRGKRGGHATNYRIVAPRSRDERG
::::::::::::::::::::::::::
XP_005 SLLRGKRGGHATNYRIVAPRSRDERG
420 430 440
>>XP_005261386 (OMIM: 608926) PREDICTED: EMI domain-cont (417 aa)
initn: 2634 init1: 1859 opt: 2153 Z-score: 813.7 bits: 159.6 E(85289): 1.4e-38
Smith-Waterman score: 2875; 89.0% identity (91.3% similar) in 446 aa overlap (1-443:1-417)
10 20 30 40 50 60
pF1KB8 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEE--------------
70 80 90 100
130 140 150 160 170 180
pF1KB8 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 --------------GCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
110 120 130 140 150
190 200 210 220 230 240
pF1KB8 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGE
280 290 300 310 320 330
370 380 390 400 410
pF1KB8 PGPKGDPGEKSHWGEGLH---QLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTP
:::::::::::::. .:. : . :..::.:: .::..: ::::::::::::::::
XP_005 PGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAII-WPEPELGSGAGPAGTGTP
340 350 360 370 380 390
420 430 440
pF1KB8 SLLRGKRGGHATNYRIVAPRSRDERG
::::::::::::::::::::::::::
XP_005 SLLRGKRGGHATNYRIVAPRSRDERG
400 410
>>XP_011528171 (OMIM: 608926) PREDICTED: EMI domain-cont (460 aa)
initn: 1897 init1: 1865 opt: 1883 Z-score: 715.0 bits: 141.5 E(85289): 4.3e-33
Smith-Waterman score: 3221; 96.3% identity (96.3% similar) in 460 aa overlap (1-443:1-460)
10 20 30 40 50 60
pF1KB8 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
130 140 150 160 170 180
190 200 210 220
pF1KB8 GPPPAQGSPGDGGLQ-----------------DQVGAWGLPGPTGPKGDAGSRGPMGMRG
::::::::::::::: ::::::::::::::::::::::::::::
XP_011 GPPPAQGSPGDGGLQGLPGAIESVRVPLLPRNDQVGAWGLPGPTGPKGDAGSRGPMGMRG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 PPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTF
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB8 TETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGER
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB8 GLRGEPGPQGSAGQRGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLRGEPGPQGSAGQRGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEP
370 380 390 400 410 420
410 420 430 440
pF1KB8 ELGSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
::::::::::::::::::::::::::::::::::::::::
XP_011 ELGSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
430 440 450 460
>>XP_011528177 (OMIM: 608926) PREDICTED: EMI domain-cont (307 aa)
initn: 1960 init1: 1427 opt: 1738 Z-score: 664.4 bits: 131.6 E(85289): 2.9e-30
Smith-Waterman score: 1974; 87.7% identity (90.9% similar) in 308 aa overlap (156-443:1-307)
130 140 150 160 170 180
pF1KB8 MALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLWGPPPA
::::::::::::::::::::::::::::::
XP_011 MTMLTVIEQPVPPTPATPEDPAPLWGPPPA
10 20 30
190 200 210 220
pF1KB8 QGSPGDGGLQ-----------------DQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQ
:::::::::: :::::::::::::::::::::::::::::::::
XP_011 QGSPGDGGLQGLPGAIESVRVPLLPRNDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQ
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB8 GPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNN
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB8 HWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGE
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB8 PGPQGSAGQRGEPGPKGDPGEKSHWGEGLH---QLREALKILAERVLILETMIGLYEPEL
:::::::::::::::::::::::::. .:. : . :..::.:: .::..: ::::
XP_011 PGPQGSAGQRGEPGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAII-WPEPEL
220 230 240 250 260
410 420 430 440
pF1KB8 GSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
::::::::::::::::::::::::::::::::::::::
XP_011 GSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
270 280 290 300
>>XP_011528176 (OMIM: 608926) PREDICTED: EMI domain-cont (397 aa)
initn: 2575 init1: 1427 opt: 1738 Z-score: 663.1 bits: 131.7 E(85289): 3.4e-30
Smith-Waterman score: 2589; 90.5% identity (93.0% similar) in 398 aa overlap (66-443:1-397)
40 50 60 70 80 90
pF1KB8 WCSYVVTRTISCHVQNGTYLQRVLQNCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRC
::::::::::::::::::::::::::::::
XP_011 MSCPGSSYRTVVRPTYKVMYKIVTAREWRC
10 20 30
100 110 120 130 140 150
pF1KB8 CPGHSGVSCEEVAASSASLEPMWSGSTMRRMALRPTAFSGCLNCSKVSELTERLKVLEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPGHSGVSCEEVAASSASLEPMWSGSTMRRMALRPTAFSGCLNCSKVSELTERLKVLEAK
40 50 60 70 80 90
160 170 180 190
pF1KB8 MTMLTVIEQPVPPTPATPEDPAPLWGPPPAQGSPGDGGLQ-----------------DQV
:::::::::::::::::::::::::::::::::::::::: :::
XP_011 MTMLTVIEQPVPPTPATPEDPAPLWGPPPAQGSPGDGGLQGLPGAIESVRVPLLPRNDQV
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB8 GAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPP
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB8 GPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGS
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB8 PGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGEPGPKGDPGEKSHWGEGLH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::. .:.
XP_011 PGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGEPGPKGDPGEKSHWAPSLQ
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB8 ---QLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVA
: . :..::.:: .::..: ::::::::::::::::::::::::::::::::::
XP_011 SFLQQQAQLELLARRVTLLEAII-WPEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVA
340 350 360 370 380
440
pF1KB8 PRSRDERG
::::::::
XP_011 PRSRDERG
390
>>XP_016884078 (OMIM: 608926) PREDICTED: EMI domain-cont (397 aa)
initn: 2575 init1: 1427 opt: 1738 Z-score: 663.1 bits: 131.7 E(85289): 3.4e-30
Smith-Waterman score: 2589; 90.5% identity (93.0% similar) in 398 aa overlap (66-443:1-397)
40 50 60 70 80 90
pF1KB8 WCSYVVTRTISCHVQNGTYLQRVLQNCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRC
::::::::::::::::::::::::::::::
XP_016 MSCPGSSYRTVVRPTYKVMYKIVTAREWRC
10 20 30
100 110 120 130 140 150
pF1KB8 CPGHSGVSCEEVAASSASLEPMWSGSTMRRMALRPTAFSGCLNCSKVSELTERLKVLEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CPGHSGVSCEEVAASSASLEPMWSGSTMRRMALRPTAFSGCLNCSKVSELTERLKVLEAK
40 50 60 70 80 90
160 170 180 190
pF1KB8 MTMLTVIEQPVPPTPATPEDPAPLWGPPPAQGSPGDGGLQ-----------------DQV
:::::::::::::::::::::::::::::::::::::::: :::
XP_016 MTMLTVIEQPVPPTPATPEDPAPLWGPPPAQGSPGDGGLQGLPGAIESVRVPLLPRNDQV
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB8 GAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPP
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB8 GPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGS
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB8 PGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGEPGPKGDPGEKSHWGEGLH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::. .:.
XP_016 PGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQRGEPGPKGDPGEKSHWAPSLQ
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB8 ---QLREALKILAERVLILETMIGLYEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVA
: . :..::.:: .::..: ::::::::::::::::::::::::::::::::::
XP_016 SFLQQQAQLELLARRVTLLEAII-WPEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVA
340 350 360 370 380
440
pF1KB8 PRSRDERG
::::::::
XP_016 PRSRDERG
390
>>XP_011528173 (OMIM: 608926) PREDICTED: EMI domain-cont (434 aa)
initn: 2869 init1: 1427 opt: 1738 Z-score: 662.6 bits: 131.7 E(85289): 3.6e-30
Smith-Waterman score: 2831; 85.7% identity (87.9% similar) in 463 aa overlap (1-443:1-434)
10 20 30 40 50 60
pF1KB8 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEE--------------
70 80 90 100
130 140 150 160 170 180
pF1KB8 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
::::::::::::::::::::::::::::::::::::::::::::::
XP_011 --------------GCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
110 120 130 140 150
190 200 210 220
pF1KB8 GPPPAQGSPGDGGLQ-----------------DQVGAWGLPGPTGPKGDAGSRGPMGMRG
::::::::::::::: ::::::::::::::::::::::::::::
XP_011 GPPPAQGSPGDGGLQGLPGAIESVRVPLLPRNDQVGAWGLPGPTGPKGDAGSRGPMGMRG
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB8 PPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTF
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB8 TETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGER
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB8 GLRGEPGPQGSAGQRGEPGPKGDPGEKSHWGEGLH---QLREALKILAERVLILETMIGL
::::::::::::::::::::::::::::::. .:. : . :..::.:: .::..:
XP_011 GLRGEPGPQGSAGQRGEPGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAII-W
340 350 360 370 380 390
410 420 430 440
pF1KB8 YEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
::::::::::::::::::::::::::::::::::::::::::
XP_011 PEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
400 410 420 430
>>XP_011528170 (OMIM: 608926) PREDICTED: EMI domain-cont (462 aa)
initn: 3062 init1: 1427 opt: 1738 Z-score: 662.3 bits: 131.8 E(85289): 3.8e-30
Smith-Waterman score: 3076; 91.8% identity (94.0% similar) in 463 aa overlap (1-443:1-462)
10 20 30 40 50 60
pF1KB8 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGGPRAWALLCLGLLLPGGGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGTYLQRVLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCPWPMSCPGSSYRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEEVAASSASLEPMWSG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STMRRMALRPTAFSGCLNCSKVSELTERLKVLEAKMTMLTVIEQPVPPTPATPEDPAPLW
130 140 150 160 170 180
190 200 210 220
pF1KB8 GPPPAQGSPGDGGLQ-----------------DQVGAWGLPGPTGPKGDAGSRGPMGMRG
::::::::::::::: ::::::::::::::::::::::::::::
XP_011 GPPPAQGSPGDGGLQGLPGAIESVRVPLLPRNDQVGAWGLPGPTGPKGDAGSRGPMGMRG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 PPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTF
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB8 TETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGER
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB8 GLRGEPGPQGSAGQRGEPGPKGDPGEKSHWGEGLH---QLREALKILAERVLILETMIGL
::::::::::::::::::::::::::::::. .:. : . :..::.:: .::..:
XP_011 GLRGEPGPQGSAGQRGEPGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAII-W
370 380 390 400 410
410 420 430 440
pF1KB8 YEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
::::::::::::::::::::::::::::::::::::::::::
XP_011 PEPELGSGAGPAGTGTPSLLRGKRGGHATNYRIVAPRSRDERG
420 430 440 450 460
443 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:50:03 2016 done: Fri Nov 4 14:50:05 2016
Total Scan time: 11.060 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]