Result of FASTA (omim) for
pF1KB8706
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8706, 490 aa
1>>>pF1KB8706 490 - 490 aa - 490 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8256+/-0.000452; mu= 15.1314+/- 0.028
mean_var=67.6115+/-13.844, 0's: 0 Z-trim(109.2): 71 B-trim: 0 in 0/49
Lambda= 0.155978
statistics sampled from 17317 (17387) to 17317 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.538), E-opt: 0.2 (0.204), width: 16
Scan time: 9.350
The best scores are: opt bits E(85289)
NP_071903 (OMIM: 135750,174500,186200,188740,20050 ( 490) 3114 710.2 3.3e-204
XP_005249612 (OMIM: 135750,174500,186200,188740,20 ( 436) 2598 594.1 2.6e-169
XP_016868000 (OMIM: 135750,174500,186200,188740,20 ( 397) 2431 556.5 5e-158
XP_016868003 (OMIM: 135750,174500,186200,188740,20 ( 367) 2323 532.2 9.6e-151
XP_016868007 (OMIM: 135750,174500,186200,188740,20 ( 338) 2138 490.5 3e-138
XP_016868006 (OMIM: 135750,174500,186200,188740,20 ( 338) 2138 490.5 3e-138
XP_016868005 (OMIM: 135750,174500,186200,188740,20 ( 343) 1915 440.4 3.9e-123
NP_060583 (OMIM: 610007) protein LMBR1L isoform 1 ( 489) 1902 437.5 4.1e-122
XP_011536866 (OMIM: 610007) PREDICTED: protein LMB ( 450) 1786 411.4 2.8e-114
XP_016875115 (OMIM: 610007) PREDICTED: protein LMB ( 484) 1786 411.4 2.9e-114
XP_011536865 (OMIM: 610007) PREDICTED: protein LMB ( 484) 1786 411.4 2.9e-114
NP_001287679 (OMIM: 610007) protein LMBR1L isoform ( 484) 1786 411.4 2.9e-114
XP_005249615 (OMIM: 135750,174500,186200,188740,20 ( 304) 1779 409.7 5.8e-114
XP_016875117 (OMIM: 610007) PREDICTED: protein LMB ( 435) 1623 374.7 2.9e-103
XP_016868004 (OMIM: 135750,174500,186200,188740,20 ( 345) 1617 373.3 6.1e-103
XP_016867998 (OMIM: 135750,174500,186200,188740,20 ( 477) 1617 373.3 8.2e-103
XP_016867996 (OMIM: 135750,174500,186200,188740,20 ( 531) 1617 373.4 9e-103
XP_016868002 (OMIM: 135750,174500,186200,188740,20 ( 379) 1489 344.5 3.1e-94
XP_016868001 (OMIM: 135750,174500,186200,188740,20 ( 379) 1489 344.5 3.1e-94
XP_016867999 (OMIM: 135750,174500,186200,188740,20 ( 438) 1489 344.5 3.5e-94
XP_016867997 (OMIM: 135750,174500,186200,188740,20 ( 517) 1489 344.6 4.1e-94
XP_011536867 (OMIM: 610007) PREDICTED: protein LMB ( 362) 1415 327.9 3.1e-89
NP_001287680 (OMIM: 610007) protein LMBR1L isoform ( 469) 1300 302.0 2.4e-81
XP_016875118 (OMIM: 610007) PREDICTED: protein LMB ( 430) 1184 275.9 1.6e-73
XP_016875116 (OMIM: 610007) PREDICTED: protein LMB ( 464) 1184 275.9 1.7e-73
XP_011536868 (OMIM: 610007) PREDICTED: protein LMB ( 281) 892 210.1 6.5e-54
XP_016875119 (OMIM: 610007) PREDICTED: protein LMB ( 281) 892 210.1 6.5e-54
XP_016875120 (OMIM: 610007) PREDICTED: protein LMB ( 261) 558 135.0 2.6e-31
>>NP_071903 (OMIM: 135750,174500,186200,188740,200500,60 (490 aa)
initn: 3114 init1: 3114 opt: 3114 Z-score: 3787.2 bits: 710.2 E(85289): 3.3e-204
Smith-Waterman score: 3114; 99.6% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KB8 MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 FVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASME
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 SLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYII
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 TLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LLIETSISALLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMV
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 SSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 SSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 RFNWLGNFYIVLSYNLLFAIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAK
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_071 RFNWLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLPNTSRDSETAK
430 440 450 460 470 480
490
pF1KB8 PSVNGHQKAL
::::::::::
NP_071 PSVNGHQKAL
490
>>XP_005249612 (OMIM: 135750,174500,186200,188740,200500 (436 aa)
initn: 2621 init1: 2598 opt: 2598 Z-score: 3160.5 bits: 594.1 E(85289): 2.6e-169
Smith-Waterman score: 2650; 88.8% identity (89.0% similar) in 490 aa overlap (1-490:1-436)
10 20 30 40 50 60
pF1KB8 MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASME
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYII
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LLIETSISALLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMV
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 SSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFG
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLG-----------
370 380 390 400
430 440 450 460 470 480
pF1KB8 RFNWLGNFYIVLSYNLLFAIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAK
:::::::::::::::::
XP_005 -------------------------------------------LHKLHLPNTSRDSETAK
410 420
490
pF1KB8 PSVNGHQKAL
::::::::::
XP_005 PSVNGHQKAL
430
>>XP_016868000 (OMIM: 135750,174500,186200,188740,200500 (397 aa)
initn: 2431 init1: 2431 opt: 2431 Z-score: 2958.1 bits: 556.5 E(85289): 5e-158
Smith-Waterman score: 2431; 99.5% identity (100.0% similar) in 383 aa overlap (108-490:15-397)
80 90 100 110 120 130
pF1KB8 LPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFA
::::::::::::::::::::::::::::::
XP_016 MNKKMKMPSSTGFRLWNLASLFSNLCLFVLMPFAFFFLESEGFA
10 20 30 40
140 150 160 170 180 190
pF1KB8 GLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCI
50 60 70 80 90 100
200 210 220 230 240 250
pF1KB8 SLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSS
110 120 130 140 150 160
260 270 280 290 300 310
pF1KB8 VEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLIETSISALLVACNIL
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
XP_016 VEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLIETSISVLLVACNIL
170 180 190 200 210 220
320 330 340 350 360 370
pF1KB8 CLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTP
230 240 250 260 270 280
380 390 400 410 420 430
pF1KB8 KKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLL
290 300 310 320 330 340
440 450 460 470 480 490
pF1KB8 FAIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL
:::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 FAIVTTLCLVRKFTSAVREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL
350 360 370 380 390
>>XP_016868003 (OMIM: 135750,174500,186200,188740,200500 (367 aa)
initn: 2323 init1: 2323 opt: 2323 Z-score: 2827.3 bits: 532.2 E(85289): 9.6e-151
Smith-Waterman score: 2323; 99.5% identity (100.0% similar) in 367 aa overlap (124-490:1-367)
100 110 120 130 140 150
pF1KB8 NYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGLKKGIRARILETLVM
::::::::::::::::::::::::::::::
XP_016 MPFAFFFLESEGFAGLKKGIRARILETLVM
10 20 30
160 170 180 190 200 210
pF1KB8 LLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGL
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB8 SRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVK
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB8 TLKTKLERRKKASAWERNLVYPAVMVLLLIETSISALLVACNILCLLVDETAMPKGTRGP
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_016 TLKTKLERRKKASAWERNLVYPAVMVLLLIETSISVLLVACNILCLLVDETAMPKGTRGP
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB8 GIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVS
220 230 240 250 260 270
400 410 420 430 440 450
pF1KB8 ILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLLFAIVTTLCLVRKFASA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
XP_016 ILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLLFAIVTTLCLVRKFTSA
280 290 300 310 320 330
460 470 480 490
pF1KB8 VREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL
:::::::::::::::::::::::::::::::::::::
XP_016 VREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL
340 350 360
>>XP_016868007 (OMIM: 135750,174500,186200,188740,200500 (338 aa)
initn: 2138 init1: 2138 opt: 2138 Z-score: 2602.9 bits: 490.5 E(85289): 3e-138
Smith-Waterman score: 2138; 99.4% identity (100.0% similar) in 338 aa overlap (153-490:1-338)
130 140 150 160 170 180
pF1KB8 LMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESL
::::::::::::::::::::::::::::::
XP_016 MLLLLALLILGIVWVASALIDNDAASMESL
10 20 30
190 200 210 220 230 240
pF1KB8 YDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITL
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB8 EEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLL
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB8 IETSISALLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSS
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSS
160 170 180 190 200 210
370 380 390 400 410 420
pF1KB8 VVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRF
220 230 240 250 260 270
430 440 450 460 470 480
pF1KB8 NWLGNFYIVLSYNLLFAIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAKPS
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 NWLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLPNTSRDSETAKPS
280 290 300 310 320 330
490
pF1KB8 VNGHQKAL
::::::::
XP_016 VNGHQKAL
>>XP_016868006 (OMIM: 135750,174500,186200,188740,200500 (338 aa)
initn: 2138 init1: 2138 opt: 2138 Z-score: 2602.9 bits: 490.5 E(85289): 3e-138
Smith-Waterman score: 2138; 99.4% identity (100.0% similar) in 338 aa overlap (153-490:1-338)
130 140 150 160 170 180
pF1KB8 LMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESL
::::::::::::::::::::::::::::::
XP_016 MLLLLALLILGIVWVASALIDNDAASMESL
10 20 30
190 200 210 220 230 240
pF1KB8 YDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITL
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB8 EEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLL
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB8 IETSISALLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSS
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSS
160 170 180 190 200 210
370 380 390 400 410 420
pF1KB8 VVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRF
220 230 240 250 260 270
430 440 450 460 470 480
pF1KB8 NWLGNFYIVLSYNLLFAIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAKPS
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 NWLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLPNTSRDSETAKPS
280 290 300 310 320 330
490
pF1KB8 VNGHQKAL
::::::::
XP_016 VNGHQKAL
>>XP_016868005 (OMIM: 135750,174500,186200,188740,200500 (343 aa)
initn: 1938 init1: 1915 opt: 1915 Z-score: 2331.6 bits: 440.4 E(85289): 3.9e-123
Smith-Waterman score: 1967; 85.6% identity (85.9% similar) in 383 aa overlap (108-490:15-343)
80 90 100 110 120 130
pF1KB8 LPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFA
::::::::::::::::::::::::::::::
XP_016 MNKKMKMPSSTGFRLWNLASLFSNLCLFVLMPFAFFFLESEGFA
10 20 30 40
140 150 160 170 180 190
pF1KB8 GLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCI
50 60 70 80 90 100
200 210 220 230 240 250
pF1KB8 SLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSS
110 120 130 140 150 160
260 270 280 290 300 310
pF1KB8 VEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLIETSISALLVACNIL
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
XP_016 VEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLIETSISVLLVACNIL
170 180 190 200 210 220
320 330 340 350 360 370
pF1KB8 CLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTP
230 240 250 260 270 280
380 390 400 410 420 430
pF1KB8 KKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLL
::::::::::::::::::::::::::::::::
XP_016 KKDDTTMTKIIGNCVSILVLSSALPVMSRTLG----------------------------
290 300 310
440 450 460 470 480 490
pF1KB8 FAIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL
:::::::::::::::::::::::::::
XP_016 --------------------------LHKLHLPNTSRDSETAKPSVNGHQKAL
320 330 340
>>NP_060583 (OMIM: 610007) protein LMBR1L isoform 1 [Hom (489 aa)
initn: 1783 init1: 978 opt: 1902 Z-score: 2313.3 bits: 437.5 E(85289): 4.1e-122
Smith-Waterman score: 1902; 61.3% identity (84.2% similar) in 475 aa overlap (1-470:1-475)
10 20 30 40 50
pF1KB8 MEGQD-EV-SAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQ--EDEDAIV
::. : :: :.::: :: ..:: : :::: ::.. ....::.:. .. .:::: :
NP_060 MEAPDYEVLSVREQLFHERIRECIISTLLFATLYILCHIFLTRFKKPAEFTTVDDEDATV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 NRISLFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFS
:.:.: : :::::.. ::::::::::::::.:::.:.::::::::::::::::::. :::
NP_060 NKIALELCTFTLAIALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 NLCLFVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDA
:: :. :::::.:: ::::::: .::. .:. ::.:::.::.::.::.::::::..:..
NP_060 NLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 ASMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQ
:. :::::.::.::::::::::..: ::::.:::.::.:::.: :.::::: .::::.::
NP_060 ANRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 IYIITLEEEALQRRL-NGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYP
.: ..:: :: ::. : : . .. :.... ..: .. ::.:.:::::.::: ::
NP_060 LYCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 AVMVLLLIETSISALLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILI
.:. ::. :..:.:.:: .:: ::.::.:::.: .: ..:..:.: .: ::.....::
NP_060 LAMLCLLVLTGLSVLIVAIHILELLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLI
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 FYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDL
::::::::::::: .: .. :. ::.::.:::::: .:::::::::.:::::.:::::
NP_060 FYLMVSSVVGFYSSPLFRSLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDL
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 LGDFGRFNWLGNFYIVLSYNLLFAIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRD
::::::::::::::::. :: :: .::::::. :..::: ::..:.:: .: ::
NP_060 LGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFP
430 440 450 460 470 480
480 490
pF1KB8 SETAKPSVNGHQKAL
NP_060 QASRKTQHQ
>>XP_011536866 (OMIM: 610007) PREDICTED: protein LMBR1L (450 aa)
initn: 1783 init1: 978 opt: 1786 Z-score: 2172.8 bits: 411.4 E(85289): 2.8e-114
Smith-Waterman score: 1786; 63.5% identity (86.0% similar) in 422 aa overlap (50-470:15-436)
20 30 40 50 60 70
pF1KB8 ESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRISLFLSTFTLAVSAGAVLLLP
.:::: ::.:.: : :::::.. :::::::
XP_011 MSSCLFPVPLSLTVDDEDATVNKIALELCTFTLAIALGAVLLLP
10 20 30 40
80 90 100 110 120 130
pF1KB8 FSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGL
:::::::.:::.:.::::::::::::::::::. ::::: :. :::::.:: :::::::
XP_011 FSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGS
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB8 KKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCISL
.::. .:. ::.:::.::.::.::.::::::..:.. :. :::::.::.::::::::::.
XP_011 RKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNKANRESLYDFWEYYLPYLYSCISF
110 120 130 140 150 160
200 210 220 230 240 250
pF1KB8 MGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRL-NGLSSSV
.: ::::.:::.::.:::.: :.::::: .::::.::.: ..:: :: ::. : : .
XP_011 LGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLYCSAFEEAALTRRICNPTSCWL
170 180 190 200 210 220
260 270 280 290 300 310
pF1KB8 EYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLIETSISALLVACNILC
.. :.... ..: .. ::.:.:::::.::: :: .:. ::. :..:.:.:: .::
XP_011 PLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLVLTGLSVLIVAIHILE
230 240 250 260 270 280
320 330 340 350 360 370
pF1KB8 LLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPK
::.::.:::.: .: ..:..:.: .: ::.....::::::::::::::: .: .. :.
XP_011 LLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSPLFRSLRPR
290 300 310 320 330 340
380 390 400 410 420 430
pF1KB8 KDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLLF
::.::.:::::: .:::::::::.:::::.:::::::::::::::::::::. :: :
XP_011 WHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAF
350 360 370 380 390 400
440 450 460 470 480 490
pF1KB8 AIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL
: .::::::. :..::: ::..:.:: .: ::
XP_011 AGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFPQASRKTQHQ
410 420 430 440 450
>>XP_016875115 (OMIM: 610007) PREDICTED: protein LMBR1L (484 aa)
initn: 1783 init1: 978 opt: 1786 Z-score: 2172.3 bits: 411.4 E(85289): 2.9e-114
Smith-Waterman score: 1786; 63.5% identity (86.0% similar) in 422 aa overlap (50-470:49-470)
20 30 40 50 60 70
pF1KB8 ESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRISLFLSTFTLAVSAGAVLLLP
.:::: ::.:.: : :::::.. :::::::
XP_016 VITGTGSVSSPLLVLPQPGPETSLMTGEPVDDEDATVNKIALELCTFTLAIALGAVLLLP
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB8 FSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGL
:::::::.:::.:.::::::::::::::::::. ::::: :. :::::.:: :::::::
XP_016 FSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGS
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB8 KKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCISL
.::. .:. ::.:::.::.::.::.::::::..:.. :. :::::.::.::::::::::.
XP_016 RKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNKANRESLYDFWEYYLPYLYSCISF
140 150 160 170 180 190
200 210 220 230 240 250
pF1KB8 MGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRL-NGLSSSV
.: ::::.:::.::.:::.: :.::::: .::::.::.: ..:: :: ::. : : .
XP_016 LGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLYCSAFEEAALTRRICNPTSCWL
200 210 220 230 240 250
260 270 280 290 300 310
pF1KB8 EYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLIETSISALLVACNILC
.. :.... ..: .. ::.:.:::::.::: :: .:. ::. :..:.:.:: .::
XP_016 PLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLVLTGLSVLIVAIHILE
260 270 280 290 300 310
320 330 340 350 360 370
pF1KB8 LLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPK
::.::.:::.: .: ..:..:.: .: ::.....::::::::::::::: .: .. :.
XP_016 LLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSPLFRSLRPR
320 330 340 350 360 370
380 390 400 410 420 430
pF1KB8 KDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLLF
::.::.:::::: .:::::::::.:::::.:::::::::::::::::::::. :: :
XP_016 WHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAF
380 390 400 410 420 430
440 450 460 470 480 490
pF1KB8 AIVTTLCLVRKFASAVREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL
: .::::::. :..::: ::..:.:: .: ::
XP_016 AGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFPQASRKTQHQ
440 450 460 470 480
490 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:46:58 2016 done: Fri Nov 4 14:47:00 2016
Total Scan time: 9.350 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]