FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8702, 371 aa
  1>>>pF1KB8702 371 - 371 aa - 371 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.5177+/-0.000834; mu= 1.0903+/- 0.051
 mean_var=284.8508+/-57.633, 0's: 0 Z-trim(117.0): 3  B-trim: 0 in 0/55
 Lambda= 0.075992
 statistics sampled from 17711 (17714) to 17711 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.544), width:  16
 Scan time:  3.080

The best scores are:                                      opt bits E(32554)
CCDS35462.1 F8A2 gene_id:474383|Hs108|chrX         ( 371) 2463 282.5   4e-76
CCDS35459.1 F8A1 gene_id:8263|Hs108|chrX           ( 371) 2463 282.5   4e-76
CCDS35463.1 F8A3 gene_id:474384|Hs108|chrX         ( 371) 2463 282.5   4e-76


>>CCDS35462.1 F8A2 gene_id:474383|Hs108|chrX              (371 aa)
 initn: 2463 init1: 2463 opt: 2463  Z-score: 1480.1  bits: 282.5 E(32554): 4e-76
Smith-Waterman score: 2463; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)

               10        20        30        40        50        60
pF1KB8 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
              310       320       330       340       350       360

              370 
pF1KB8 QETISPSGQGV
       :::::::::::
CCDS35 QETISPSGQGV
              370 

>>CCDS35459.1 F8A1 gene_id:8263|Hs108|chrX                (371 aa)
 initn: 2463 init1: 2463 opt: 2463  Z-score: 1480.1  bits: 282.5 E(32554): 4e-76
Smith-Waterman score: 2463; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)

               10        20        30        40        50        60
pF1KB8 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
              310       320       330       340       350       360

              370 
pF1KB8 QETISPSGQGV
       :::::::::::
CCDS35 QETISPSGQGV
              370 

>>CCDS35463.1 F8A3 gene_id:474384|Hs108|chrX              (371 aa)
 initn: 2463 init1: 2463 opt: 2463  Z-score: 1480.1  bits: 282.5 E(32554): 4e-76
Smith-Waterman score: 2463; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)

               10        20        30        40        50        60
pF1KB8 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
              310       320       330       340       350       360

              370 
pF1KB8 QETISPSGQGV
       :::::::::::
CCDS35 QETISPSGQGV
              370 




371 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 14:44:22 2016 done: Fri Nov  4 14:44:22 2016
 Total Scan time:  3.080 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]