Result of FASTA (ccds) for
pF1KB8695
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8695, 720 aa
1>>>pF1KB8695 720 - 720 aa - 720 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9440+/-0.00113; mu= 12.3082+/- 0.068
mean_var=98.1418+/-19.587, 0's: 0 Z-trim(104.9): 13 B-trim: 143 in 1/49
Lambda= 0.129463
statistics sampled from 8147 (8152) to 8147 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.25), width: 16
Scan time: 3.640
The best scores are: opt bits E(32554)
CCDS59508.1 PNPLA8 gene_id:50640|Hs108|chr7 ( 720) 4714 891.4 0
CCDS34733.1 PNPLA8 gene_id:50640|Hs108|chr7 ( 782) 3677 697.8 1.6e-200
CCDS59075.1 PNPLA8 gene_id:50640|Hs108|chr7 ( 682) 2987 568.9 9e-162
>>CCDS59508.1 PNPLA8 gene_id:50640|Hs108|chr7 (720 aa)
initn: 4714 init1: 4714 opt: 4714 Z-score: 4760.7 bits: 891.4 E(32554): 0
Smith-Waterman score: 4714; 100.0% identity (100.0% similar) in 720 aa overlap (1-720:1-720)
10 20 30 40 50 60
pF1KB8 MSINLTVDIYIYLLSNARSVCGKQRSKQLYFLFSPKHYWRISHISLQRGFHTNIIRCKWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MSINLTVDIYIYLLSNARSVCGKQRSKQLYFLFSPKHYWRISHISLQRGFHTNIIRCKWT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KSEAHSCSKHCYSPSNHGLHIGILKLSTSAPKGLTKVNICMSRIKSTLNSVSKAVFGNQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 KSEAHSCSKHCYSPSNHGLHIGILKLSTSAPKGLTKVNICMSRIKSTLNSVSKAVFGNQN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EMISRLAQFKPSSQILRKVSDSGWLKQKNIKQAIKSLKKYSDKSAEKSPFPEEKSHIIDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EMISRLAQFKPSSQILRKVSDSGWLKQKNIKQAIKSLKKYSDKSAEKSPFPEEKSHIIDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 EEDIGKRSLFHYTSSITTKFGDSFYFLSNHINSYFKRKEKMSQQKENEHFRDKSELEDKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EEDIGKRSLFHYTSSITTKFGDSFYFLSNHINSYFKRKEKMSQQKENEHFRDKSELEDKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 VEEGKLRSPDPGILAYKPGSESVHTVDKPTSPSAIPDVLQVSTKQSIANFLSRPTEGVQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VEEGKLRSPDPGILAYKPGSESVHTVDKPTSPSAIPDVLQVSTKQSIANFLSRPTEGVQA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LVGGYIGGLVPKLKYDSKSQSEEQEEPAKTDQAVSKDRNAEEKKRLSLQREKIIARVSID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LVGGYIGGLVPKLKYDSKSQSEEQEEPAKTDQAVSKDRNAEEKKRLSLQREKIIARVSID
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 NRTRALVQALRRTTDPKLCITRVEELTFHLLEFPEGKGVAVKERIIPYLLRLRQIKDETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NRTRALVQALRRTTDPKLCITRVEELTFHLLEFPEGKGVAVKERIIPYLLRLRQIKDETL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 QAAVREILALIGYVDPVKGRGIRILSIDGGGTRGVVALQTLRKLVELTQKPVHQLFDYIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QAAVREILALIGYVDPVKGRGIRILSIDGGGTRGVVALQTLRKLVELTQKPVHQLFDYIC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 GVSTGAILAFMLGLFHMPLDECEELYRKLGSDVFSQNVIVGTVKMSWSHAFYDSQTWENI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GVSTGAILAFMLGLFHMPLDECEELYRKLGSDVFSQNVIVGTVKMSWSHAFYDSQTWENI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 LKDRMGSALMIETARNPTCPKVAADGGLLLNNPSALAMHECKCLWPDVPLECIVSLGTGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LKDRMGSALMIETARNPTCPKVAADGGLLLNNPSALAMHECKCLWPDVPLECIVSLGTGR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 YESDVRNTVTYTSLKTKLSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLDES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 YESDVRNTVTYTSLKTKLSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLDES
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 RNEKLDQLQLEGLKYIERNEQKMKKVAKILSQEKTTLQKINDWIKLKTDMYEGLPFFSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RNEKLDQLQLEGLKYIERNEQKMKKVAKILSQEKTTLQKINDWIKLKTDMYEGLPFFSKL
670 680 690 700 710 720
>>CCDS34733.1 PNPLA8 gene_id:50640|Hs108|chr7 (782 aa)
initn: 4700 init1: 3677 opt: 3677 Z-score: 3713.3 bits: 697.8 E(32554): 1.6e-200
Smith-Waterman score: 4382; 91.8% identity (91.8% similar) in 752 aa overlap (1-690:1-752)
10 20 30 40 50 60
pF1KB8 MSINLTVDIYIYLLSNARSVCGKQRSKQLYFLFSPKHYWRISHISLQRGFHTNIIRCKWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MSINLTVDIYIYLLSNARSVCGKQRSKQLYFLFSPKHYWRISHISLQRGFHTNIIRCKWT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KSEAHSCSKHCYSPSNHGLHIGILKLSTSAPKGLTKVNICMSRIKSTLNSVSKAVFGNQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KSEAHSCSKHCYSPSNHGLHIGILKLSTSAPKGLTKVNICMSRIKSTLNSVSKAVFGNQN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EMISRLAQFKPSSQILRKVSDSGWLKQKNIKQAIKSLKKYSDKSAEKSPFPEEKSHIIDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EMISRLAQFKPSSQILRKVSDSGWLKQKNIKQAIKSLKKYSDKSAEKSPFPEEKSHIIDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 EEDIGKRSLFHYTSSITTKFGDSFYFLSNHINSYFKRKEKMSQQKENEHFRDKSELEDKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EEDIGKRSLFHYTSSITTKFGDSFYFLSNHINSYFKRKEKMSQQKENEHFRDKSELEDKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 VEEGKLRSPDPGILAYKPGSESVHTVDKPTSPSAIPDVLQVSTKQSIANFLSRPTEGVQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VEEGKLRSPDPGILAYKPGSESVHTVDKPTSPSAIPDVLQVSTKQSIANFLSRPTEGVQA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LVGGYIGGLVPKLKYDSKSQSEEQEEPAKTDQAVSKDRNAEEKKRLSLQREKIIARVSID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LVGGYIGGLVPKLKYDSKSQSEEQEEPAKTDQAVSKDRNAEEKKRLSLQREKIIARVSID
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 NRTRALVQALRRTTDPKLCITRVEELTFHLLEFPEGKGVAVKERIIPYLLRLRQIKDETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 NRTRALVQALRRTTDPKLCITRVEELTFHLLEFPEGKGVAVKERIIPYLLRLRQIKDETL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 QAAVREILALIGYVDPVKGRGIRILSIDGGGTRGVVALQTLRKLVELTQKPVHQLFDYIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QAAVREILALIGYVDPVKGRGIRILSIDGGGTRGVVALQTLRKLVELTQKPVHQLFDYIC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 GVSTGAILAFMLGLFHMPLDECEELYRKLGSDVFSQNVIVGTVKMSWSHAFYDSQTWENI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GVSTGAILAFMLGLFHMPLDECEELYRKLGSDVFSQNVIVGTVKMSWSHAFYDSQTWENI
490 500 510 520 530 540
550 560
pF1KB8 LKDRMGSALMIETARNPTCPKVAA------------------------------------
::::::::::::::::::::::::
CCDS34 LKDRMGSALMIETARNPTCPKVAAVSTIVNRGITPKAFVFRNYGHFPGINSHYLGGCQYK
550 560 570 580 590 600
570 580 590
pF1KB8 --------------------------DGGLLLNNPSALAMHECKCLWPDVPLECIVSLGT
::::::::::::::::::::::::::::::::::
CCDS34 MWQAIRASSAAPGYFAEYALGNDLHQDGGLLLNNPSALAMHECKCLWPDVPLECIVSLGT
610 620 630 640 650 660
600 610 620 630 640 650
pF1KB8 GRYESDVRNTVTYTSLKTKLSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GRYESDVRNTVTYTSLKTKLSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLD
670 680 690 700 710 720
660 670 680 690 700 710
pF1KB8 ESRNEKLDQLQLEGLKYIERNEQKMKKVAKILSQEKTTLQKINDWIKLKTDMYEGLPFFS
::::::::::::::::::::::::::::::::
CCDS34 ESRNEKLDQLQLEGLKYIERNEQKMKKVAKILSQEKTTLQKINDWIKLKTDMYEGLPFFS
730 740 750 760 770 780
720
pF1KB8 KL
CCDS34 KL
>>CCDS59075.1 PNPLA8 gene_id:50640|Hs108|chr7 (682 aa)
initn: 4010 init1: 2987 opt: 2987 Z-score: 3017.8 bits: 568.9 E(32554): 9e-162
Smith-Waterman score: 3692; 90.5% identity (90.5% similar) in 652 aa overlap (101-690:1-652)
80 90 100 110 120 130
pF1KB8 CYSPSNHGLHIGILKLSTSAPKGLTKVNICMSRIKSTLNSVSKAVFGNQNEMISRLAQFK
::::::::::::::::::::::::::::::
CCDS59 MSRIKSTLNSVSKAVFGNQNEMISRLAQFK
10 20 30
140 150 160 170 180 190
pF1KB8 PSSQILRKVSDSGWLKQKNIKQAIKSLKKYSDKSAEKSPFPEEKSHIIDKEEDIGKRSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PSSQILRKVSDSGWLKQKNIKQAIKSLKKYSDKSAEKSPFPEEKSHIIDKEEDIGKRSLF
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB8 HYTSSITTKFGDSFYFLSNHINSYFKRKEKMSQQKENEHFRDKSELEDKKVEEGKLRSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 HYTSSITTKFGDSFYFLSNHINSYFKRKEKMSQQKENEHFRDKSELEDKKVEEGKLRSPD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB8 PGILAYKPGSESVHTVDKPTSPSAIPDVLQVSTKQSIANFLSRPTEGVQALVGGYIGGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PGILAYKPGSESVHTVDKPTSPSAIPDVLQVSTKQSIANFLSRPTEGVQALVGGYIGGLV
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB8 PKLKYDSKSQSEEQEEPAKTDQAVSKDRNAEEKKRLSLQREKIIARVSIDNRTRALVQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PKLKYDSKSQSEEQEEPAKTDQAVSKDRNAEEKKRLSLQREKIIARVSIDNRTRALVQAL
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB8 RRTTDPKLCITRVEELTFHLLEFPEGKGVAVKERIIPYLLRLRQIKDETLQAAVREILAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RRTTDPKLCITRVEELTFHLLEFPEGKGVAVKERIIPYLLRLRQIKDETLQAAVREILAL
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB8 IGYVDPVKGRGIRILSIDGGGTRGVVALQTLRKLVELTQKPVHQLFDYICGVSTGAILAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 IGYVDPVKGRGIRILSIDGGGTRGVVALQTLRKLVELTQKPVHQLFDYICGVSTGAILAF
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB8 MLGLFHMPLDECEELYRKLGSDVFSQNVIVGTVKMSWSHAFYDSQTWENILKDRMGSALM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MLGLFHMPLDECEELYRKLGSDVFSQNVIVGTVKMSWSHAFYDSQTWENILKDRMGSALM
400 410 420 430 440 450
560
pF1KB8 IETARNPTCPKVAA----------------------------------------------
::::::::::::::
CCDS59 IETARNPTCPKVAAVSTIVNRGITPKAFVFRNYGHFPGINSHYLGGCQYKMWQAIRASSA
460 470 480 490 500 510
570 580 590 600
pF1KB8 ----------------DGGLLLNNPSALAMHECKCLWPDVPLECIVSLGTGRYESDVRNT
::::::::::::::::::::::::::::::::::::::::::::
CCDS59 APGYFAEYALGNDLHQDGGLLLNNPSALAMHECKCLWPDVPLECIVSLGTGRYESDVRNT
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB8 VTYTSLKTKLSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLDESRNEKLDQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VTYTSLKTKLSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLDESRNEKLDQL
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB8 QLEGLKYIERNEQKMKKVAKILSQEKTTLQKINDWIKLKTDMYEGLPFFSKL
::::::::::::::::::::::
CCDS59 QLEGLKYIERNEQKMKKVAKILSQEKTTLQKINDWIKLKTDMYEGLPFFSKL
640 650 660 670 680
720 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:41:08 2016 done: Fri Nov 4 14:41:09 2016
Total Scan time: 3.640 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]