Result of FASTA (omim) for
pF1KB8686
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8686, 404 aa
1>>>pF1KB8686 404 - 404 aa - 404 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2590+/-0.000334; mu= 18.1690+/- 0.021
mean_var=72.5631+/-14.777, 0's: 0 Z-trim(115.0): 27 B-trim: 96 in 1/54
Lambda= 0.150562
statistics sampled from 25236 (25259) to 25236 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.667), E-opt: 0.2 (0.296), width: 16
Scan time: 8.140
The best scores are: opt bits E(85289)
NP_079094 (OMIM: 610552,617132,617133) ubiquitin-l ( 404) 2643 583.2 3.8e-166
NP_001307139 (OMIM: 610552,617132,617133) ubiquiti ( 348) 2288 506.0 5.5e-143
NP_938143 (OMIM: 610552,617132,617133) ubiquitin-l ( 348) 2288 506.0 5.5e-143
NP_001308167 (OMIM: 610552,617132,617133) ubiquiti ( 314) 2024 448.7 9.3e-126
NP_001308168 (OMIM: 610552,617132,617133) ubiquiti ( 292) 1937 429.8 4.3e-120
NP_055299 (OMIM: 609277) adenylyltransferase and s ( 460) 180 48.2 4.8e-05
NP_003325 (OMIM: 301830,314370) ubiquitin-like mod (1058) 180 48.5 9.2e-05
XP_016885270 (OMIM: 301830,314370) PREDICTED: ubiq (1058) 180 48.5 9.2e-05
NP_695012 (OMIM: 301830,314370) ubiquitin-like mod (1058) 180 48.5 9.2e-05
XP_016885269 (OMIM: 301830,314370) PREDICTED: ubiq (1058) 180 48.5 9.2e-05
XP_005272706 (OMIM: 301830,314370) PREDICTED: ubiq (1064) 180 48.5 9.3e-05
XP_016885268 (OMIM: 301830,314370) PREDICTED: ubiq (1064) 180 48.5 9.3e-05
XP_011542256 (OMIM: 301830,314370) PREDICTED: ubiq (1072) 180 48.5 9.3e-05
XP_016885267 (OMIM: 301830,314370) PREDICTED: ubiq (1086) 180 48.5 9.4e-05
XP_016885266 (OMIM: 301830,314370) PREDICTED: ubiq (1109) 180 48.5 9.6e-05
NP_003959 (OMIM: 603172) NEDD8-activating enzyme E ( 463) 173 46.7 0.00014
NP_937838 (OMIM: 603172) NEDD8-activating enzyme E ( 449) 162 44.3 0.0007
NP_005490 (OMIM: 613295) SUMO-activating enzyme su ( 640) 158 43.6 0.0017
>>NP_079094 (OMIM: 610552,617132,617133) ubiquitin-like (404 aa)
initn: 2643 init1: 2643 opt: 2643 Z-score: 3103.8 bits: 583.2 E(85289): 3.8e-166
Smith-Waterman score: 2643; 100.0% identity (100.0% similar) in 404 aa overlap (1-404:1-404)
10 20 30 40 50 60
pF1KB8 MAESVERLQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MAESVERLQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 RMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 HQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 HQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 CVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANID
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 EKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 EKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PQCDDRNCRKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 PQCDDRNCRKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGP
310 320 330 340 350 360
370 380 390 400
pF1KB8 VPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM
::::::::::::::::::::::::::::::::::::::::::::
NP_079 VPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM
370 380 390 400
>>NP_001307139 (OMIM: 610552,617132,617133) ubiquitin-li (348 aa)
initn: 2288 init1: 2288 opt: 2288 Z-score: 2688.0 bits: 506.0 E(85289): 5.5e-143
Smith-Waterman score: 2288; 100.0% identity (100.0% similar) in 348 aa overlap (57-404:1-348)
30 40 50 60 70 80
pF1KB8 VPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGS
::::::::::::::::::::::::::::::
NP_001 MALKRMGIVSDYEKIRTFAVAIVGVGGVGS
10 20 30
90 100 110 120 130 140
pF1KB8 VTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESG
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 VSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 QNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQE
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB8 VIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELT
280 290 300 310 320 330
390 400
pF1KB8 VEDSGESLEDLMAKMKNM
::::::::::::::::::
NP_001 VEDSGESLEDLMAKMKNM
340
>>NP_938143 (OMIM: 610552,617132,617133) ubiquitin-like (348 aa)
initn: 2288 init1: 2288 opt: 2288 Z-score: 2688.0 bits: 506.0 E(85289): 5.5e-143
Smith-Waterman score: 2288; 100.0% identity (100.0% similar) in 348 aa overlap (57-404:1-348)
30 40 50 60 70 80
pF1KB8 VPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGS
::::::::::::::::::::::::::::::
NP_938 MALKRMGIVSDYEKIRTFAVAIVGVGGVGS
10 20 30
90 100 110 120 130 140
pF1KB8 VTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_938 VTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_938 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESG
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 VSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_938 VSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 QNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_938 QNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQE
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB8 VIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_938 VIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELT
280 290 300 310 320 330
390 400
pF1KB8 VEDSGESLEDLMAKMKNM
::::::::::::::::::
NP_938 VEDSGESLEDLMAKMKNM
340
>>NP_001308167 (OMIM: 610552,617132,617133) ubiquitin-li (314 aa)
initn: 2024 init1: 2024 opt: 2024 Z-score: 2378.7 bits: 448.7 E(85289): 9.3e-126
Smith-Waterman score: 2024; 100.0% identity (100.0% similar) in 306 aa overlap (99-404:9-314)
70 80 90 100 110 120
pF1KB8 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKV
::::::::::::::::::::::::::::::
NP_001 MRSNIKPAKLLLFDYDKVELANMNRLFFQPHQAGLSKV
10 20 30
130 140 150 160 170 180
pF1KB8 QAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEAR
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB8 MTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREG
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB8 VCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNC
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB8 RKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGI
220 230 240 250 260 270
370 380 390 400
pF1KB8 TVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM
::::::::::::::::::::::::::::::::::::
NP_001 TVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM
280 290 300 310
>>NP_001308168 (OMIM: 610552,617132,617133) ubiquitin-li (292 aa)
initn: 1937 init1: 1937 opt: 1937 Z-score: 2277.0 bits: 429.8 E(85289): 4.3e-120
Smith-Waterman score: 1937; 100.0% identity (100.0% similar) in 292 aa overlap (113-404:1-292)
90 100 110 120 130 140
pF1KB8 GVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDV
::::::::::::::::::::::::::::::
NP_001 MNRLFFQPHQAGLSKVQAAEHTLRNINPDV
10 20 30
150 160 170 180 190 200
pF1KB8 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTW
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB8 MESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVA
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB8 GILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAAL
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB8 PKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTIPKKQEDSV
220 230 240 250 260 270
390 400
pF1KB8 TELTVEDSGESLEDLMAKMKNM
::::::::::::::::::::::
NP_001 TELTVEDSGESLEDLMAKMKNM
280 290
>>NP_055299 (OMIM: 609277) adenylyltransferase and sulfu (460 aa)
initn: 204 init1: 126 opt: 180 Z-score: 211.6 bits: 48.2 E(85289): 4.8e-05
Smith-Waterman score: 240; 27.6% identity (51.6% similar) in 254 aa overlap (53-298:63-291)
30 40 50 60 70 80
pF1KB8 RSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVG
::: ..: ..: : .. : : ::: :
NP_055 LAEQEPQPERLVPVSPLPPKAALSRDEILRYSRQLVLPELG-VHGQLRLGTACVLIVGCG
40 50 60 70 80 90
90 100 110 120 130 140
pF1KB8 GVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQ-AGLSKVQAAEHTLRNINPD
:.: :..:. :.:.: : ::: ::..:. : .. . :: .:. .: .:: .:
NP_055 GLGCPLAQYLAAAGVGRLGLVDYDVVEMSNLARQVLHGEALAGQAKAFSAAASLRRLN--
100 110 120 130 140
150 160 170 180 190 200
pF1KB8 VLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT
..:: . . .:. . :.: .: :: .:. .: :: :.
NP_055 ----------SAVECVPYTQALTPATALDLVRRYDVVADCSDNVPTRYLVNDACVLAGRP
150 160 170 180 190
210 220 230 240 250 260
pF1KB8 WMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVV
. . : :.: . . :. : : : : : . ..:::
NP_055 LVSA--SALRFEGQITVYHYDGGPCYRCIFPQPPPA---------ETVTNCADGGVLGVV
200 210 220 230 240
270 280 290 300 310
pF1KB8 AGIL--VQ--NVLKFLLNFGTVSF---YLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEE
.:.: .: .:::. ..: :. : ..:.. : .. ..
NP_055 TGVLGCLQALEVLKIAAGLGP-SYSGSLLLFDALRGHFRSIRLRSRRLDCAACGERPTVT
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB8 YKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYTI
NP_055 DLLDYEAFCGSSATDKCRSLQLLSPEERVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRL
310 320 330 340 350 360
>>NP_003325 (OMIM: 301830,314370) ubiquitin-like modifie (1058 aa)
initn: 70 init1: 70 opt: 180 Z-score: 206.5 bits: 48.5 E(85289): 9.2e-05
Smith-Waterman score: 180; 25.6% identity (55.2% similar) in 172 aa overlap (69-232:464-625)
40 50 60 70 80 90
pF1KB8 RIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIG
::. .::.:..: . .. :.:
NP_003 EDKEVLTEDKCLQRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLG
440 450 460 470 480 490
100 110 120 130 140 150
pF1KB8 -----KLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT
.... :.: .: .:.:: : :.: .. : ..: ..:..:: . :. .
NP_003 CGEGGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVG
500 510 520 530 540 550
160 170 180 190 200 210
pF1KB8 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAV
.:: . . .. .: : . .:: .::: .. : . .:::. ..
NP_003 PD------TERIYDDDFFQN--LDGVANALDNVDARMYMDRRCVYYRKPLLESGTL--GT
560 570 580 590 600
220 230 240 250 260 270
pF1KB8 SGHIQLIIP--GESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVL
.:..:..:: :: . ::
NP_003 KGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENV
610 620 630 640 650 660
>>XP_016885270 (OMIM: 301830,314370) PREDICTED: ubiquiti (1058 aa)
initn: 70 init1: 70 opt: 180 Z-score: 206.5 bits: 48.5 E(85289): 9.2e-05
Smith-Waterman score: 180; 25.6% identity (55.2% similar) in 172 aa overlap (69-232:464-625)
40 50 60 70 80 90
pF1KB8 RIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIG
::. .::.:..: . .. :.:
XP_016 EDKEVLTEDKCLQRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLG
440 450 460 470 480 490
100 110 120 130 140 150
pF1KB8 -----KLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT
.... :.: .: .:.:: : :.: .. : ..: ..:..:: . :. .
XP_016 CGEGGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVG
500 510 520 530 540 550
160 170 180 190 200 210
pF1KB8 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAV
.:: . . .. .: : . .:: .::: .. : . .:::. ..
XP_016 PD------TERIYDDDFFQN--LDGVANALDNVDARMYMDRRCVYYRKPLLESGTL--GT
560 570 580 590 600
220 230 240 250 260 270
pF1KB8 SGHIQLIIP--GESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVL
.:..:..:: :: . ::
XP_016 KGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENV
610 620 630 640 650 660
>>NP_695012 (OMIM: 301830,314370) ubiquitin-like modifie (1058 aa)
initn: 70 init1: 70 opt: 180 Z-score: 206.5 bits: 48.5 E(85289): 9.2e-05
Smith-Waterman score: 180; 25.6% identity (55.2% similar) in 172 aa overlap (69-232:464-625)
40 50 60 70 80 90
pF1KB8 RIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIG
::. .::.:..: . .. :.:
NP_695 EDKEVLTEDKCLQRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLG
440 450 460 470 480 490
100 110 120 130 140 150
pF1KB8 -----KLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT
.... :.: .: .:.:: : :.: .. : ..: ..:..:: . :. .
NP_695 CGEGGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVG
500 510 520 530 540 550
160 170 180 190 200 210
pF1KB8 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAV
.:: . . .. .: : . .:: .::: .. : . .:::. ..
NP_695 PD------TERIYDDDFFQN--LDGVANALDNVDARMYMDRRCVYYRKPLLESGTL--GT
560 570 580 590 600
220 230 240 250 260 270
pF1KB8 SGHIQLIIP--GESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVL
.:..:..:: :: . ::
NP_695 KGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENV
610 620 630 640 650 660
>>XP_016885269 (OMIM: 301830,314370) PREDICTED: ubiquiti (1058 aa)
initn: 70 init1: 70 opt: 180 Z-score: 206.5 bits: 48.5 E(85289): 9.2e-05
Smith-Waterman score: 180; 25.6% identity (55.2% similar) in 172 aa overlap (69-232:464-625)
40 50 60 70 80 90
pF1KB8 RIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIG
::. .::.:..: . .. :.:
XP_016 EDKEVLTEDKCLQRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLG
440 450 460 470 480 490
100 110 120 130 140 150
pF1KB8 -----KLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT
.... :.: .: .:.:: : :.: .. : ..: ..:..:: . :. .
XP_016 CGEGGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVG
500 510 520 530 540 550
160 170 180 190 200 210
pF1KB8 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAV
.:: . . .. .: : . .:: .::: .. : . .:::. ..
XP_016 PD------TERIYDDDFFQN--LDGVANALDNVDARMYMDRRCVYYRKPLLESGTL--GT
560 570 580 590 600
220 230 240 250 260 270
pF1KB8 SGHIQLIIP--GESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVL
.:..:..:: :: . ::
XP_016 KGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENV
610 620 630 640 650 660
404 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:34:21 2016 done: Fri Nov 4 14:34:23 2016
Total Scan time: 8.140 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]