Result of FASTA (omim) for
pF1KB8639
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8639, 328 aa
1>>>pF1KB8639 328 - 328 aa - 328 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1512+/-0.000487; mu= 5.9099+/- 0.030
mean_var=130.7891+/-27.073, 0's: 0 Z-trim(111.4): 225 B-trim: 38 in 2/54
Lambda= 0.112147
statistics sampled from 19704 (19980) to 19704 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.234), width: 16
Scan time: 7.020
The best scores are: opt bits E(85289)
NP_003847 (OMIM: 601203) interleukin-1 receptor-li ( 328) 2216 370.5 2.7e-102
XP_011510453 (OMIM: 601203) PREDICTED: interleukin ( 328) 2216 370.5 2.7e-102
XP_006712902 (OMIM: 601203) PREDICTED: interleukin ( 556) 2178 364.5 2.9e-100
NP_057316 (OMIM: 601203) interleukin-1 receptor-li ( 556) 2178 364.5 2.9e-100
NP_001269337 (OMIM: 601203) interleukin-1 receptor ( 211) 1428 242.9 4.5e-64
XP_011510106 (OMIM: 147811) PREDICTED: interleukin ( 398) 354 69.3 1.5e-11
XP_006712797 (OMIM: 147811) PREDICTED: interleukin ( 398) 354 69.3 1.5e-11
NP_004624 (OMIM: 147811) interleukin-1 receptor ty ( 398) 354 69.3 1.5e-11
XP_006712799 (OMIM: 147811) PREDICTED: interleukin ( 423) 354 69.3 1.6e-11
XP_011510103 (OMIM: 147811) PREDICTED: interleukin ( 441) 354 69.3 1.6e-11
NP_001275635 (OMIM: 147810) interleukin-1 receptor ( 538) 346 68.1 4.7e-11
NP_001307907 (OMIM: 147810) interleukin-1 receptor ( 569) 346 68.1 5e-11
XP_011509417 (OMIM: 147810) PREDICTED: interleukin ( 569) 346 68.1 5e-11
NP_001307910 (OMIM: 147810) interleukin-1 receptor ( 569) 346 68.1 5e-11
NP_001307909 (OMIM: 147810) interleukin-1 receptor ( 569) 346 68.1 5e-11
XP_011509420 (OMIM: 147810) PREDICTED: interleukin ( 569) 346 68.1 5e-11
NP_001307911 (OMIM: 147810) interleukin-1 receptor ( 569) 346 68.1 5e-11
XP_005263987 (OMIM: 147810) PREDICTED: interleukin ( 569) 346 68.1 5e-11
XP_016859478 (OMIM: 147810) PREDICTED: interleukin ( 569) 346 68.1 5e-11
XP_005263991 (OMIM: 147810) PREDICTED: interleukin ( 569) 346 68.1 5e-11
XP_011509419 (OMIM: 147810) PREDICTED: interleukin ( 569) 346 68.1 5e-11
NP_000868 (OMIM: 147810) interleukin-1 receptor ty ( 569) 346 68.1 5e-11
XP_011509418 (OMIM: 147810) PREDICTED: interleukin ( 569) 346 68.1 5e-11
XP_011510107 (OMIM: 147811) PREDICTED: interleukin ( 378) 318 63.5 8.3e-10
XP_011510105 (OMIM: 147811) PREDICTED: interleukin ( 404) 318 63.5 8.7e-10
XP_011510398 (OMIM: 604512) PREDICTED: interleukin ( 569) 319 63.8 1e-09
NP_003845 (OMIM: 604512) interleukin-1 receptor-li ( 575) 319 63.8 1e-09
XP_005264093 (OMIM: 604512) PREDICTED: interleukin ( 575) 319 63.8 1e-09
XP_011510396 (OMIM: 604512) PREDICTED: interleukin ( 595) 319 63.8 1.1e-09
XP_005264092 (OMIM: 604512) PREDICTED: interleukin ( 603) 319 63.8 1.1e-09
XP_016860663 (OMIM: 604512) PREDICTED: interleukin ( 606) 319 63.8 1.1e-09
XP_011510394 (OMIM: 604512) PREDICTED: interleukin ( 617) 319 63.8 1.1e-09
XP_011510393 (OMIM: 604512) PREDICTED: interleukin ( 622) 313 62.8 2.2e-09
NP_001248348 (OMIM: 147811) interleukin-1 receptor ( 296) 306 61.5 2.6e-09
NP_001161401 (OMIM: 602626) interleukin-1 receptor ( 570) 300 60.7 8.6e-09
NP_001161400 (OMIM: 602626) interleukin-1 receptor ( 570) 300 60.7 8.6e-09
NP_002173 (OMIM: 602626) interleukin-1 receptor ac ( 570) 300 60.7 8.6e-09
XP_016861836 (OMIM: 602626) PREDICTED: interleukin ( 385) 297 60.1 8.8e-09
NP_001161403 (OMIM: 602626) interleukin-1 receptor ( 687) 300 60.7 1e-08
NP_001161402 (OMIM: 602626) interleukin-1 receptor ( 356) 292 59.3 1.5e-08
NP_608273 (OMIM: 602626) interleukin-1 receptor ac ( 356) 292 59.3 1.5e-08
NP_059112 (OMIM: 300277) X-linked interleukin-1 re ( 686) 290 59.1 3.1e-08
XP_016884892 (OMIM: 300277) PREDICTED: X-linked in ( 686) 290 59.1 3.1e-08
XP_016860378 (OMIM: 147811) PREDICTED: interleukin ( 313) 273 56.1 1.1e-07
XP_016884729 (OMIM: 300143,300206) PREDICTED: inte ( 696) 276 56.9 1.5e-07
NP_055086 (OMIM: 300143,300206) interleukin-1 rece ( 696) 276 56.9 1.5e-07
XP_011510109 (OMIM: 147811) PREDICTED: interleukin ( 274) 241 50.9 3.6e-06
XP_011510395 (OMIM: 604512) PREDICTED: interleukin ( 598) 241 51.1 6.7e-06
NP_003844 (OMIM: 604509) interleukin-18 receptor a ( 599) 236 50.3 1.2e-05
XP_011510401 (OMIM: 604494) PREDICTED: interleukin ( 487) 233 49.8 1.4e-05
>>NP_003847 (OMIM: 601203) interleukin-1 receptor-like 1 (328 aa)
initn: 2216 init1: 2216 opt: 2216 Z-score: 1957.6 bits: 370.5 E(85289): 2.7e-102
Smith-Waterman score: 2216; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
250 260 270 280 290 300
310 320
pF1KB8 YDCLALNLHGLRRHTVRLSRKNPSKECF
::::::::::::::::::::::::::::
NP_003 YDCLALNLHGLRRHTVRLSRKNPSKECF
310 320
>>XP_011510453 (OMIM: 601203) PREDICTED: interleukin-1 r (328 aa)
initn: 2216 init1: 2216 opt: 2216 Z-score: 1957.6 bits: 370.5 E(85289): 2.7e-102
Smith-Waterman score: 2216; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
250 260 270 280 290 300
310 320
pF1KB8 YDCLALNLHGLRRHTVRLSRKNPSKECF
::::::::::::::::::::::::::::
XP_011 YDCLALNLHGLRRHTVRLSRKNPSKECF
310 320
>>XP_006712902 (OMIM: 601203) PREDICTED: interleukin-1 r (556 aa)
initn: 2178 init1: 2178 opt: 2178 Z-score: 1921.1 bits: 364.5 E(85289): 2.9e-100
Smith-Waterman score: 2178; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
250 260 270 280 290 300
310 320
pF1KB8 YDCLALNLHGLRRHTVRLSRKNPSKECF
:::::::::::::::::::::::
XP_006 YDCLALNLHGLRRHTVRLSRKNPIDHHSIYCIIAVCSVFLMLINVLVIILKMFWIEATLL
310 320 330 340 350 360
>>NP_057316 (OMIM: 601203) interleukin-1 receptor-like 1 (556 aa)
initn: 2178 init1: 2178 opt: 2178 Z-score: 1921.1 bits: 364.5 E(85289): 2.9e-100
Smith-Waterman score: 2178; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPRQGKPSYTVDWYYSQTNKSIPTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 ERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TVSGSEKNSKIYCPTIDLYNWTAPLEWFKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 CKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQ
250 260 270 280 290 300
310 320
pF1KB8 YDCLALNLHGLRRHTVRLSRKNPSKECF
:::::::::::::::::::::::
NP_057 YDCLALNLHGLRRHTVRLSRKNPIDHHSIYCIIAVCSVFLMLINVLVIILKMFWIEATLL
310 320 330 340 350 360
>>NP_001269337 (OMIM: 601203) interleukin-1 receptor-lik (211 aa)
initn: 1428 init1: 1428 opt: 1428 Z-score: 1271.3 bits: 242.9 E(85289): 4.5e-64
Smith-Waterman score: 1428; 100.0% identity (100.0% similar) in 211 aa overlap (118-328:1-211)
90 100 110 120 130 140
pF1KB8 IVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLYNWTAPLEW
::::::::::::::::::::::::::::::
NP_001 MYSTVSGSEKNSKIYCPTIDLYNWTAPLEW
10 20 30
150 160 170 180 190 200
pF1KB8 FKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFTVKDEQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKNCQALQGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFTVKDEQG
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB8 FSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITDFGEPRIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITDFGEPRIQ
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB8 QEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPSKEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPSKEC
160 170 180 190 200 210
pF1KB8 F
:
NP_001 F
>>XP_011510106 (OMIM: 147811) PREDICTED: interleukin-1 r (398 aa)
initn: 131 init1: 67 opt: 354 Z-score: 328.3 bits: 69.3 E(85289): 1.5e-11
Smith-Waterman score: 354; 24.1% identity (57.5% similar) in 320 aa overlap (22-324:36-345)
10 20 30 40
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPR-------QGKPSY
:. . ::.: . .:::. . .:
XP_011 VLVMGVSAFTLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 TVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTI
.. :. ... ...: .:..:..:. : .::: ::: :.: .:. .. .. .
XP_011 NLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRV
70 80 90 100 110 120
110 120 130 140 150
pF1KB8 YKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLYNWT-----APLEWFKNCQALQ--GS
... .: .: .. : . .. . :: :: ..: . ..:.:. :. .
XP_011 FEN-TDAFLP-FISYPQILTLSTSGVLVCP--DLSEFTRDKTDVKIQWYKDSLLLDKDNE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 RYRAHK--SFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIG
.. . . . :.. .: :::: : : . ..: .:..: . . .: .. .. :::
XP_011 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETI-PVII
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB8 APAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQS
.: .. . .:. .. :.. .: :: . . . : : :.: . . : . :: :
XP_011 SPLKT--ISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI-ESAYPGGRVTEGPRQE
250 260 270 280 290
280 290 300 310 320
pF1KB8 FS-NGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPSKECF
.: :. ... : . : .::: ... :.. : : .:.: . :. :
XP_011 YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNT--LSFQTLRTTVKEASSTFSWGIVLA
300 310 320 330 340 350
XP_011 PLSLAFLVLGGIWMHRRCKHRTGKADGLTVLWPHHQDFQSYPK
360 370 380 390
>>XP_006712797 (OMIM: 147811) PREDICTED: interleukin-1 r (398 aa)
initn: 131 init1: 67 opt: 354 Z-score: 328.3 bits: 69.3 E(85289): 1.5e-11
Smith-Waterman score: 354; 24.1% identity (57.5% similar) in 320 aa overlap (22-324:36-345)
10 20 30 40
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPR-------QGKPSY
:. . ::.: . .:::. . .:
XP_006 VLVMGVSAFTLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 TVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTI
.. :. ... ...: .:..:..:. : .::: ::: :.: .:. .. .. .
XP_006 NLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRV
70 80 90 100 110 120
110 120 130 140 150
pF1KB8 YKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLYNWT-----APLEWFKNCQALQ--GS
... .: .: .. : . .. . :: :: ..: . ..:.:. :. .
XP_006 FEN-TDAFLP-FISYPQILTLSTSGVLVCP--DLSEFTRDKTDVKIQWYKDSLLLDKDNE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 RYRAHK--SFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIG
.. . . . :.. .: :::: : : . ..: .:..: . . .: .. .. :::
XP_006 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETI-PVII
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB8 APAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQS
.: .. . .:. .. :.. .: :: . . . : : :.: . . : . :: :
XP_006 SPLKT--ISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI-ESAYPGGRVTEGPRQE
250 260 270 280 290
280 290 300 310 320
pF1KB8 FS-NGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPSKECF
.: :. ... : . : .::: ... :.. : : .:.: . :. :
XP_006 YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNT--LSFQTLRTTVKEASSTFSWGIVLA
300 310 320 330 340 350
XP_006 PLSLAFLVLGGIWMHRRCKHRTGKADGLTVLWPHHQDFQSYPK
360 370 380 390
>>NP_004624 (OMIM: 147811) interleukin-1 receptor type 2 (398 aa)
initn: 131 init1: 67 opt: 354 Z-score: 328.3 bits: 69.3 E(85289): 1.5e-11
Smith-Waterman score: 354; 24.1% identity (57.5% similar) in 320 aa overlap (22-324:36-345)
10 20 30 40
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPR-------QGKPSY
:. . ::.: . .:::. . .:
NP_004 VLVMGVSAFTLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 TVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTI
.. :. ... ...: .:..:..:. : .::: ::: :.: .:. .. .. .
NP_004 NLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRV
70 80 90 100 110 120
110 120 130 140 150
pF1KB8 YKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLYNWT-----APLEWFKNCQALQ--GS
... .: .: .. : . .. . :: :: ..: . ..:.:. :. .
NP_004 FEN-TDAFLP-FISYPQILTLSTSGVLVCP--DLSEFTRDKTDVKIQWYKDSLLLDKDNE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 RYRAHK--SFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIG
.. . . . :.. .: :::: : : . ..: .:..: . . .: .. .. :::
NP_004 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETI-PVII
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB8 APAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQS
.: .. . .:. .. :.. .: :: . . . : : :.: . . : . :: :
NP_004 SPLKT--ISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI-ESAYPGGRVTEGPRQE
250 260 270 280 290
280 290 300 310 320
pF1KB8 FS-NGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPSKECF
.: :. ... : . : .::: ... :.. : : .:.: . :. :
NP_004 YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNT--LSFQTLRTTVKEASSTFSWGIVLA
300 310 320 330 340 350
NP_004 PLSLAFLVLGGIWMHRRCKHRTGKADGLTVLWPHHQDFQSYPK
360 370 380 390
>>XP_006712799 (OMIM: 147811) PREDICTED: interleukin-1 r (423 aa)
initn: 131 init1: 67 opt: 354 Z-score: 327.9 bits: 69.3 E(85289): 1.6e-11
Smith-Waterman score: 354; 24.1% identity (57.5% similar) in 320 aa overlap (22-324:61-370)
10 20 30 40
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPR-------QGKPSY
:. . ::.: . .:::. . .:
XP_006 VLVMGVSAFTLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRI
40 50 60 70 80 90
50 60 70 80 90 100
pF1KB8 TVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTI
.. :. ... ...: .:..:..:. : .::: ::: :.: .:. .. .. .
XP_006 NLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRV
100 110 120 130 140 150
110 120 130 140 150
pF1KB8 YKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLYNWT-----APLEWFKNCQALQ--GS
... .: .: .. : . .. . :: :: ..: . ..:.:. :. .
XP_006 FEN-TDAFLP-FISYPQILTLSTSGVLVCP--DLSEFTRDKTDVKIQWYKDSLLLDKDNE
160 170 180 190 200
160 170 180 190 200 210
pF1KB8 RYRAHK--SFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIG
.. . . . :.. .: :::: : : . ..: .:..: . . .: .. .. :::
XP_006 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETI-PVII
210 220 230 240 250 260
220 230 240 250 260 270
pF1KB8 APAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQS
.: .. . .:. .. :.. .: :: . . . : : :.: . . : . :: :
XP_006 SPLKT--ISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI-ESAYPGGRVTEGPRQE
270 280 290 300 310 320
280 290 300 310 320
pF1KB8 FS-NGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPSKECF
.: :. ... : . : .::: ... :.. : : .:.: . :. :
XP_006 YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNT--LSFQTLRTTVKEASSTFSWGIVLA
330 340 350 360 370 380
XP_006 PLSLAFLVLGGIWMHRRCKHRTGKADGLTVLWPHHQDFQSYPK
390 400 410 420
>>XP_011510103 (OMIM: 147811) PREDICTED: interleukin-1 r (441 aa)
initn: 131 init1: 67 opt: 354 Z-score: 327.6 bits: 69.3 E(85289): 1.6e-11
Smith-Waterman score: 354; 24.1% identity (57.5% similar) in 320 aa overlap (22-324:79-388)
10 20 30 40
pF1KB8 MGFWILAILTILMYSTAAKFSKQSWGLENEALIVRCPR-------QGKPSY
:. . ::.: . .:::. . .:
XP_011 VLVMGVSAFTLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRI
50 60 70 80 90 100
50 60 70 80 90 100
pF1KB8 TVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAAVADSGIYTCIVRSPTFNRTGYANVTI
.. :. ... ...: .:..:..:. : .::: ::: :.: .:. .. .. .
XP_011 NLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRV
110 120 130 140 150 160
110 120 130 140 150
pF1KB8 YKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLYNWT-----APLEWFKNCQALQ--GS
... .: .: .. : . .. . :: :: ..: . ..:.:. :. .
XP_011 FEN-TDAFLP-FISYPQILTLSTSGVLVCP--DLSEFTRDKTDVKIQWYKDSLLLDKDNE
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 RYRAHK--SFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFTVKDEQGFSLFPVIG
.. . . . :.. .: :::: : : . ..: .:..: . . .: .. .. :::
XP_011 KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETI-PVII
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB8 APAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITDFGEPRIQQEEGQNQS
.: .. . .:. .. :.. .: :: . . . : : :.: . . : . :: :
XP_011 SPLKT--ISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI-ESAYPGGRVTEGPRQE
290 300 310 320 330 340
280 290 300 310 320
pF1KB8 FS-NGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPSKECF
.: :. ... : . : .::: ... :.. : : .:.: . :. :
XP_011 YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNT--LSFQTLRTTVKEASSTFSWGIVLA
350 360 370 380 390
XP_011 PLSLAFLVLGGIWMHRRCKHRTGKADGLTVLWPHHQDFQSYPK
400 410 420 430 440
328 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:50:24 2016 done: Sat Nov 5 21:50:25 2016
Total Scan time: 7.020 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]