Result of FASTA (ccds) for
pF1KB8588
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8588, 1196 aa
1>>>pF1KB8588 1196 - 1196 aa - 1196 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3599+/-0.00144; mu= -1.5422+/- 0.085
mean_var=347.4302+/-77.209, 0's: 0 Z-trim(107.5): 63 B-trim: 0 in 0/53
Lambda= 0.068808
statistics sampled from 9567 (9596) to 9567 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.295), width: 16
Scan time: 5.390
The best scores are: opt bits E(32554)
CCDS47483.1 AHI1 gene_id:54806|Hs108|chr6 (1196) 8012 811.3 0
CCDS47484.1 AHI1 gene_id:54806|Hs108|chr6 (1053) 6936 704.4 3.7e-202
>>CCDS47483.1 AHI1 gene_id:54806|Hs108|chr6 (1196 aa)
initn: 8012 init1: 8012 opt: 8012 Z-score: 4319.4 bits: 811.3 E(32554): 0
Smith-Waterman score: 8012; 99.9% identity (100.0% similar) in 1196 aa overlap (1-1196:1-1196)
10 20 30 40 50 60
pF1KB8 MPTAESEAKVKTKVRFEKLLKTHSDLMREKKKLKKKLVRSEENISPDTIRSNLHYMKETT
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
CCDS47 MPTAESEAKVKTKVRFEELLKTHSDLMREKKKLKKKLVRSEENISPDTIRSNLHYMKETT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SDDPDTIRSNLPHIKETTSDDVSAANTNNLKKSTRVTKNKLRNTQLATENPNGDASVEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SDDPDTIRSNLPHIKETTSDDVSAANTNNLKKSTRVTKNKLRNTQLATENPNGDASVEED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KQGKPNKKVIKTVPQLTTQDLKPETPENKVDSTHQKTHTKPQPGVDHQKSEKANEGREET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KQGKPNKKVIKTVPQLTTQDLKPETPENKVDSTHQKTHTKPQPGVDHQKSEKANEGREET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 DLEEDEELMQAYQCHVTEEMAKEIKRKIRKKLKEQLTYFPSDTLFHDDKLSSEKRKKKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DLEEDEELMQAYQCHVTEEMAKEIKRKIRKKLKEQLTYFPSDTLFHDDKLSSEKRKKKKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 VPVFSKAETSTLTISGDTVEGEQKKESSVRSVSSDSHQDDEISSMEQSTEDSMQDDTKPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VPVFSKAETSTLTISGDTVEGEQKKESSVRSVSSDSHQDDEISSMEQSTEDSMQDDTKPK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PKKTKKKTKAVADNNEDVDGDGVHEITSRDSPVYPKCLLDDDLVLGVYIHRTDRLKSDFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PKKTKKKTKAVADNNEDVDGDGVHEITSRDSPVYPKCLLDDDLVLGVYIHRTDRLKSDFM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 ISHPMVKIHVVDEHTGQYVKKDDSGRPVSSYYEKENVDYILPIMTQPYDFKQLKSRLPEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISHPMVKIHVVDEHTGQYVKKDDSGRPVSSYYEKENVDYILPIMTQPYDFKQLKSRLPEW
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 EEQIVFNENFPYLLRGSDESPKVILFFEILDFLSVDEIKNNSEVQNQECGFRKIAWAFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EEQIVFNENFPYLLRGSDESPKVILFFEILDFLSVDEIKNNSEVQNQECGFRKIAWAFLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 LLGANGNANINSKLRLQLYYPPTKPRSPLSVVEAFEWWSKCPRNHYPSTLYVTVRGLKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLGANGNANINSKLRLQLYYPPTKPRSPLSVVEAFEWWSKCPRNHYPSTLYVTVRGLKVP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 DCIKPSYRSMMALQEEKGKPVHCERHHESSSVDTEPGLEESKEVIKWKRLPGQACRIPNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DCIKPSYRSMMALQEEKGKPVHCERHHESSSVDTEPGLEESKEVIKWKRLPGQACRIPNK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 HLFSLNAGERGCFCLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HLFSLNAGERGCFCLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 SWSKDDHYILTSSSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVRELVVTGCYDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SWSKDDHYILTSSSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVRELVVTGCYDS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 MIRIWKVEMREDSAILVRQFDVHKSFINSLCFDTEGHHMYSGDCTGVIVVWNTYVKINDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MIRIWKVEMREDSAILVRQFDVHKSFINSLCFDTEGHHMYSGDCTGVIVVWNTYVKINDL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB8 EHSVHHWTINKEIKETEFKGIPISYLEIHPNGKRLLIHTKDSTLRIMDLRILVARKFVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EHSVHHWTINKEIKETEFKGIPISYLEIHPNGKRLLIHTKDSTLRIMDLRILVARKFVGA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB8 ANYREKIHSTLTPCGTFLFAGSEDGIVYVWNPETGEQVAMYSDLPFKSPIRDISYHPFEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ANYREKIHSTLTPCGTFLFAGSEDGIVYVWNPETGEQVAMYSDLPFKSPIRDISYHPFEN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB8 MVAFCAFGQNEPILLYIYDFHVAQQEAEMFKRYNGTFPLPGIHQSQDALCTCPKLPHQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MVAFCAFGQNEPILLYIYDFHVAQQEAEMFKRYNGTFPLPGIHQSQDALCTCPKLPHQGS
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB8 FQIDEFVHTESSSTKMQLVKQRLETVTEVIRSCAAKVNKNLSFTSPPAVSSQQSKLKQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FQIDEFVHTESSSTKMQLVKQRLETVTEVIRSCAAKVNKNLSFTSPPAVSSQQSKLKQSN
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB8 MLTAQEILHQFGFTQTGIISIERKPCNHQVDTAPTVVALYDYTANRSDELTIHRGDIIRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MLTAQEILHQFGFTQTGIISIERKPCNHQVDTAPTVVALYDYTANRSDELTIHRGDIIRV
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB8 FFKDNEDWWYGSIGKGQEGYFPANHVASETLYQELPPEIKERSPPLSPEEKTKIEKSPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FFKDNEDWWYGSIGKGQEGYFPANHVASETLYQELPPEIKERSPPLSPEEKTKIEKSPAP
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190
pF1KB8 QKQSINKNKSQDFRLGSESMTHSEMRKEQSHEDQGHIMDTRMRKNKQAGRKVTLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QKQSINKNKSQDFRLGSESMTHSEMRKEQSHEDQGHIMDTRMRKNKQAGRKVTLIE
1150 1160 1170 1180 1190
>>CCDS47484.1 AHI1 gene_id:54806|Hs108|chr6 (1053 aa)
initn: 6933 init1: 6933 opt: 6936 Z-score: 3742.8 bits: 704.4 E(32554): 3.7e-202
Smith-Waterman score: 6936; 99.1% identity (99.3% similar) in 1046 aa overlap (1-1046:1-1046)
10 20 30 40 50 60
pF1KB8 MPTAESEAKVKTKVRFEKLLKTHSDLMREKKKLKKKLVRSEENISPDTIRSNLHYMKETT
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
CCDS47 MPTAESEAKVKTKVRFEELLKTHSDLMREKKKLKKKLVRSEENISPDTIRSNLHYMKETT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SDDPDTIRSNLPHIKETTSDDVSAANTNNLKKSTRVTKNKLRNTQLATENPNGDASVEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SDDPDTIRSNLPHIKETTSDDVSAANTNNLKKSTRVTKNKLRNTQLATENPNGDASVEED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KQGKPNKKVIKTVPQLTTQDLKPETPENKVDSTHQKTHTKPQPGVDHQKSEKANEGREET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KQGKPNKKVIKTVPQLTTQDLKPETPENKVDSTHQKTHTKPQPGVDHQKSEKANEGREET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 DLEEDEELMQAYQCHVTEEMAKEIKRKIRKKLKEQLTYFPSDTLFHDDKLSSEKRKKKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DLEEDEELMQAYQCHVTEEMAKEIKRKIRKKLKEQLTYFPSDTLFHDDKLSSEKRKKKKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 VPVFSKAETSTLTISGDTVEGEQKKESSVRSVSSDSHQDDEISSMEQSTEDSMQDDTKPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VPVFSKAETSTLTISGDTVEGEQKKESSVRSVSSDSHQDDEISSMEQSTEDSMQDDTKPK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PKKTKKKTKAVADNNEDVDGDGVHEITSRDSPVYPKCLLDDDLVLGVYIHRTDRLKSDFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PKKTKKKTKAVADNNEDVDGDGVHEITSRDSPVYPKCLLDDDLVLGVYIHRTDRLKSDFM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 ISHPMVKIHVVDEHTGQYVKKDDSGRPVSSYYEKENVDYILPIMTQPYDFKQLKSRLPEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISHPMVKIHVVDEHTGQYVKKDDSGRPVSSYYEKENVDYILPIMTQPYDFKQLKSRLPEW
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 EEQIVFNENFPYLLRGSDESPKVILFFEILDFLSVDEIKNNSEVQNQECGFRKIAWAFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EEQIVFNENFPYLLRGSDESPKVILFFEILDFLSVDEIKNNSEVQNQECGFRKIAWAFLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 LLGANGNANINSKLRLQLYYPPTKPRSPLSVVEAFEWWSKCPRNHYPSTLYVTVRGLKVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLGANGNANINSKLRLQLYYPPTKPRSPLSVVEAFEWWSKCPRNHYPSTLYVTVRGLKVP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 DCIKPSYRSMMALQEEKGKPVHCERHHESSSVDTEPGLEESKEVIKWKRLPGQACRIPNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DCIKPSYRSMMALQEEKGKPVHCERHHESSSVDTEPGLEESKEVIKWKRLPGQACRIPNK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 HLFSLNAGERGCFCLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HLFSLNAGERGCFCLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 SWSKDDHYILTSSSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVRELVVTGCYDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SWSKDDHYILTSSSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVRELVVTGCYDS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 MIRIWKVEMREDSAILVRQFDVHKSFINSLCFDTEGHHMYSGDCTGVIVVWNTYVKINDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MIRIWKVEMREDSAILVRQFDVHKSFINSLCFDTEGHHMYSGDCTGVIVVWNTYVKINDL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB8 EHSVHHWTINKEIKETEFKGIPISYLEIHPNGKRLLIHTKDSTLRIMDLRILVARKFVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EHSVHHWTINKEIKETEFKGIPISYLEIHPNGKRLLIHTKDSTLRIMDLRILVARKFVGA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB8 ANYREKIHSTLTPCGTFLFAGSEDGIVYVWNPETGEQVAMYSDLPFKSPIRDISYHPFEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ANYREKIHSTLTPCGTFLFAGSEDGIVYVWNPETGEQVAMYSDLPFKSPIRDISYHPFEN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB8 MVAFCAFGQNEPILLYIYDFHVAQQEAEMFKRYNGTFPLPGIHQSQDALCTCPKLPHQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MVAFCAFGQNEPILLYIYDFHVAQQEAEMFKRYNGTFPLPGIHQSQDALCTCPKLPHQGS
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB8 FQIDEFVHTESSSTKMQLVKQRLETVTEVIRSCAAKVNKNLSFTSPPAVSSQQSKLKQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FQIDEFVHTESSSTKMQLVKQRLETVTEVIRSCAAKVNKNLSFTSPPAVSSQQSKLKQSN
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB8 MLTAQEILHQFGFTQTGIISIERKPCNHQVDTAPTVVALYDYTANRSDELTIHRGDIIRV
:::::::::::::::: : . :
CCDS47 MLTAQEILHQFGFTQTDSHFAEFNTCILWWKKH
1030 1040 1050
1196 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:35:12 2016 done: Fri Nov 4 13:35:13 2016
Total Scan time: 5.390 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]