Result of FASTA (ccds) for
pF1KB8491
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8491, 903 aa
1>>>pF1KB8491 903 - 903 aa - 903 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.5652+/-0.00108; mu= -10.8117+/- 0.065
mean_var=442.2023+/-93.942, 0's: 0 Z-trim(115.7): 99 B-trim: 119 in 1/51
Lambda= 0.060991
statistics sampled from 16220 (16308) to 16220 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.501), width: 16
Scan time: 5.810
The best scores are: opt bits E(32554)
CCDS11126.1 CNTROB gene_id:116840|Hs108|chr17 ( 903) 5934 537.0 5.8e-152
CCDS82063.1 CNTROB gene_id:116840|Hs108|chr17 ( 904) 5922 536.0 1.2e-151
CCDS32557.1 CNTROB gene_id:116840|Hs108|chr17 ( 925) 5500 498.9 1.8e-140
>>CCDS11126.1 CNTROB gene_id:116840|Hs108|chr17 (903 aa)
initn: 5934 init1: 5934 opt: 5934 Z-score: 2841.7 bits: 537.0 E(32554): 5.8e-152
Smith-Waterman score: 5934; 99.9% identity (99.9% similar) in 903 aa overlap (1-903:1-903)
10 20 30 40 50 60
pF1KB8 MATSADSPSSPLGAEDLLSDSSEPPGLNQVSSEVTSQLYASLRLSRQAEATARAQLYLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MATSADSPSSPLGAEDLLSDSSEPPGLNQVSSEVTSQLYASLRLSRQAEATARAQLYLPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 TSPPHEGLDGFAQELSRSLSVGLEKNLKKKDGSKHIFEMESVRGQLQTMLQTSRDTAYRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TSPPHEGLDGFAQELSRSLSVGLEKNLKKKDGSKHIFEMESVRGQLQTMLQTSRDTAYRD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PLIPGAGSERREEDSFDSDSTATLLNTRPLQDLSPSSSAQALEELFPRYTSLRPGPPLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PLIPGAGSERREEDSFDSDSTATLLNTRPLQDLSPSSSAQALEELFPRYTSLRPGPPLNP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PDFQGLRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PDFQGLRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQETVTRLEQSLSEAMEALNREQESAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQETVTRLEQSLSEAMEALNREQESAR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 TARRERDALQLEMSLVQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TARRERDALQLEMSLVQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 HRKQLQDLSGQHQQELASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVCELQSGNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HRKQLQDLSGQHQQELASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVCELQSGNQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 QLEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPQAPPAGPSSPGPQEPEKEERRVW
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS11 QLEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERRVW
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 TMPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TMPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 TSSTAGAFSALGAFHPDHRAERPFPEEDPGPDGEGLLKQGLPPAQLEGLKNFLHQLLETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TSSTAGAFSALGAFHPDHRAERPFPEEDPGPDGEGLLKQGLPPAQLEGLKNFLHQLLETV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 PQNNENPSVDLLPPKSGPLTVPSWEEAPQVPRIPPPVHKTKVPLAMASSLFRVPEPPSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PQNNENPSVDLLPPKSGPLTVPSWEEAPQVPRIPPPVHKTKVPLAMASSLFRVPEPPSSH
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB8 SQGSGPSSGSPERGGDGLTFPRQLMEVSQLLRLYQARGWGALPAEDLLLYLKRLEHSGTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SQGSGPSSGSPERGGDGLTFPRQLMEVSQLLRLYQARGWGALPAEDLLLYLKRLEHSGTD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB8 GRGDNVPRRNTDSRLGEIPRKEIPSQAVPRRLATAPKTEKPPARKKSGHPAPSSMRSRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GRGDNVPRRNTDSRLGEIPRKEIPSQAVPRRLATAPKTEKPPARKKSGHPAPSSMRSRGG
850 860 870 880 890 900
pF1KB8 VWR
:::
CCDS11 VWR
>>CCDS82063.1 CNTROB gene_id:116840|Hs108|chr17 (904 aa)
initn: 5920 init1: 5484 opt: 5922 Z-score: 2836.0 bits: 536.0 E(32554): 1.2e-151
Smith-Waterman score: 5922; 99.8% identity (99.8% similar) in 904 aa overlap (1-903:1-904)
10 20 30 40 50 60
pF1KB8 MATSADSPSSPLGAEDLLSDSSEPPGLNQVSSEVTSQLYASLRLSRQAEATARAQLYLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MATSADSPSSPLGAEDLLSDSSEPPGLNQVSSEVTSQLYASLRLSRQAEATARAQLYLPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 TSPPHEGLDGFAQELSRSLSVGLEKNLKKKDGSKHIFEMESVRGQLQTMLQTSRDTAYRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TSPPHEGLDGFAQELSRSLSVGLEKNLKKKDGSKHIFEMESVRGQLQTMLQTSRDTAYRD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PLIPGAGSERREEDSFDSDSTATLLNTRPLQDLSPSSSAQALEELFPRYTSLRPGPPLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PLIPGAGSERREEDSFDSDSTATLLNTRPLQDLSPSSSAQALEELFPRYTSLRPGPPLNP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PDFQGLRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PDFQGLRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQETVTRLEQSLSEAMEALNREQESAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQETVTRLEQSLSEAMEALNREQESAR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 TARRERDALQLEMSLVQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TARRERDALQLEMSLVQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 HRKQLQDLSGQHQQELASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVCELQSGNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 HRKQLQDLSGQHQQELASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVCELQSGNQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 QLEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPQAPPAGPSSPGPQEPEKEERRVW
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS82 QLEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERRVW
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 TMPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TMPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 TSSTAGAFSALGAFHPDHRAERPFPEEDPGPDGEGLLKQGLPPAQLEGLKNFLHQLLETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TSSTAGAFSALGAFHPDHRAERPFPEEDPGPDGEGLLKQGLPPAQLEGLKNFLHQLLETV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 PQNNENPSVDLLPPKSGPLTVPSWEEAPQVPRIPPPVHKTKVPLAMASSLFRVPEPPSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PQNNENPSVDLLPPKSGPLTVPSWEEAPQVPRIPPPVHKTKVPLAMASSLFRVPEPPSSH
730 740 750 760 770 780
790 800 810 820 830
pF1KB8 SQGSGPSSGSPERGGDGLTFPRQLMEVSQLLRLYQARGWGALPAEDLLLYLKRLEHSG-T
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS82 SQGSGPSSGSPERGGDGLTFPRQLMEVSQLLRLYQARGWGALPAEDLLLYLKRLEHSGRT
790 800 810 820 830 840
840 850 860 870 880 890
pF1KB8 DGRGDNVPRRNTDSRLGEIPRKEIPSQAVPRRLATAPKTEKPPARKKSGHPAPSSMRSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DGRGDNVPRRNTDSRLGEIPRKEIPSQAVPRRLATAPKTEKPPARKKSGHPAPSSMRSRG
850 860 870 880 890 900
900
pF1KB8 GVWR
::::
CCDS82 GVWR
>>CCDS32557.1 CNTROB gene_id:116840|Hs108|chr17 (925 aa)
initn: 5484 init1: 5484 opt: 5500 Z-score: 2635.2 bits: 498.9 E(32554): 1.8e-140
Smith-Waterman score: 5880; 97.5% identity (97.5% similar) in 925 aa overlap (1-903:1-925)
10 20 30 40 50 60
pF1KB8 MATSADSPSSPLGAEDLLSDSSEPPGLNQVSSEVTSQLYASLRLSRQAEATARAQLYLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MATSADSPSSPLGAEDLLSDSSEPPGLNQVSSEVTSQLYASLRLSRQAEATARAQLYLPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 TSPPHEGLDGFAQELSRSLSVGLEKNLKKKDGSKHIFEMESVRGQLQTMLQTSRDTAYRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TSPPHEGLDGFAQELSRSLSVGLEKNLKKKDGSKHIFEMESVRGQLQTMLQTSRDTAYRD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PLIPGAGSERREEDSFDSDSTATLLNTRPLQDLSPSSSAQALEELFPRYTSLRPGPPLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PLIPGAGSERREEDSFDSDSTATLLNTRPLQDLSPSSSAQALEELFPRYTSLRPGPPLNP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PDFQGLRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PDFQGLRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQETVTRLEQSLSEAMEALNREQESAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQETVTRLEQSLSEAMEALNREQESAR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 TARRERDALQLEMSLVQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TARRERDALQLEMSLVQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 HRKQLQDLSGQHQQELASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVCELQSGNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 HRKQLQDLSGQHQQELASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVCELQSGNQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 QLEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPQAPPAGPSSPGPQEPEKEERRVW
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS32 QLEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERRVW
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 TMPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TMPPMAVALKPVLQQSREARDELPGAPPVLCSSSSDLSLLLGPSFQSQHSFQPLEPKPDL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 TSSTAGAFSALGAFHPDHRAERPFPEEDPGPDGEGLLKQGLPPAQLEGLKNFLHQLLETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TSSTAGAFSALGAFHPDHRAERPFPEEDPGPDGEGLLKQGLPPAQLEGLKNFLHQLLETV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 PQNNENPSVDLLPPKSGPLTVPSWEEAPQVPRIPPPVHKTKVPLAMASSLFRVPEPPSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PQNNENPSVDLLPPKSGPLTVPSWEEAPQVPRIPPPVHKTKVPLAMASSLFRVPEPPSSH
730 740 750 760 770 780
790 800 810 820 830
pF1KB8 SQGSGPSSGSPERGGDGLTFPRQLMEVSQLLRLYQARGWGALPAEDLLLYLKRLEHSG--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SQGSGPSSGSPERGGDGLTFPRQLMEVSQLLRLYQARGWGALPAEDLLLYLKRLEHSGYK
790 800 810 820 830 840
840 850 860 870
pF1KB8 --------------------TDGRGDNVPRRNTDSRLGEIPRKEIPSQAVPRRLATAPKT
::::::::::::::::::::::::::::::::::::::::
CCDS32 PGRKEEGFSGWKLDYGEWSGTDGRGDNVPRRNTDSRLGEIPRKEIPSQAVPRRLATAPKT
850 860 870 880 890 900
880 890 900
pF1KB8 EKPPARKKSGHPAPSSMRSRGGVWR
:::::::::::::::::::::::::
CCDS32 EKPPARKKSGHPAPSSMRSRGGVWR
910 920
903 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 15:40:50 2016 done: Sat Nov 5 15:40:51 2016
Total Scan time: 5.810 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]