Result of FASTA (omim) for
pF1KB8437
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8437, 526 aa
1>>>pF1KB8437 526 - 526 aa - 526 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5170+/-0.000387; mu= 12.7463+/- 0.024
mean_var=109.9076+/-22.674, 0's: 0 Z-trim(115.3): 333 B-trim: 69 in 1/54
Lambda= 0.122338
statistics sampled from 25255 (25675) to 25255 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.301), width: 16
Scan time: 10.710
The best scores are: opt bits E(85289)
NP_062455 (OMIM: 612115) rho guanine nucleotide ex ( 526) 3503 629.5 7.7e-180
XP_011532068 (OMIM: 612115) PREDICTED: rho guanine ( 527) 3295 592.7 8.7e-169
XP_011532067 (OMIM: 612115) PREDICTED: rho guanine ( 527) 3295 592.7 8.7e-169
NP_001276627 (OMIM: 612115) rho guanine nucleotide ( 532) 3295 592.7 8.8e-169
XP_016861991 (OMIM: 612115) PREDICTED: rho guanine ( 538) 3295 592.7 8.9e-169
XP_011532066 (OMIM: 612115) PREDICTED: rho guanine ( 544) 3295 592.8 8.9e-169
NP_001122087 (OMIM: 612115) rho guanine nucleotide ( 558) 3295 592.8 9.1e-169
XP_005265244 (OMIM: 612115) PREDICTED: rho guanine ( 558) 3295 592.8 9.1e-169
XP_005265243 (OMIM: 612115) PREDICTED: rho guanine ( 558) 3295 592.8 9.1e-169
NP_001122088 (OMIM: 612115) rho guanine nucleotide ( 532) 3292 592.2 1.3e-168
XP_011532069 (OMIM: 612115) PREDICTED: rho guanine ( 412) 2742 495.1 1.7e-139
XP_016861994 (OMIM: 612115) PREDICTED: rho guanine ( 451) 2622 473.9 4.4e-133
XP_016861993 (OMIM: 612115) PREDICTED: rho guanine ( 463) 2414 437.2 5.1e-122
XP_016861992 (OMIM: 612115) PREDICTED: rho guanine ( 483) 2414 437.2 5.2e-122
XP_016861995 (OMIM: 612115) PREDICTED: rho guanine ( 457) 2411 436.7 7.2e-122
NP_005854 (OMIM: 606450) neuroepithelial cell-tran ( 542) 1882 343.4 1.1e-93
NP_001040625 (OMIM: 606450) neuroepithelial cell-t ( 596) 1873 341.8 3.4e-93
XP_016883926 (OMIM: 602442) PREDICTED: intersectin (1185) 389 80.1 4.2e-14
XP_016883925 (OMIM: 602442) PREDICTED: intersectin (1608) 389 80.2 5.3e-14
XP_016883924 (OMIM: 602442) PREDICTED: intersectin (1613) 389 80.2 5.3e-14
XP_016883923 (OMIM: 602442) PREDICTED: intersectin (1645) 389 80.2 5.4e-14
XP_016883922 (OMIM: 602442) PREDICTED: intersectin (1650) 389 80.2 5.4e-14
XP_016883919 (OMIM: 602442) PREDICTED: intersectin (1679) 389 80.2 5.5e-14
XP_016883918 (OMIM: 602442) PREDICTED: intersectin (1684) 389 80.2 5.5e-14
NP_001317939 (OMIM: 602442) intersectin-1 isoform (1716) 389 80.2 5.6e-14
NP_003015 (OMIM: 602442) intersectin-1 isoform ITS (1721) 389 80.2 5.6e-14
XP_016883917 (OMIM: 602442) PREDICTED: intersectin (1721) 389 80.2 5.6e-14
NP_062541 (OMIM: 604464) intersectin-2 isoform 3 [ (1670) 342 71.9 1.7e-11
NP_006268 (OMIM: 604464) intersectin-2 isoform 1 [ (1697) 342 71.9 1.7e-11
XP_011529194 (OMIM: 300429,300607) PREDICTED: rho ( 456) 285 61.4 6.5e-09
NP_001166950 (OMIM: 300429,300607) rho guanine nuc ( 463) 285 61.5 6.6e-09
XP_005262308 (OMIM: 300429,300607) PREDICTED: rho ( 495) 285 61.5 7e-09
NP_001317424 (OMIM: 300429,300607) rho guanine nuc ( 495) 285 61.5 7e-09
XP_016884857 (OMIM: 300429,300607) PREDICTED: rho ( 495) 285 61.5 7e-09
XP_016884856 (OMIM: 300429,300607) PREDICTED: rho ( 495) 285 61.5 7e-09
XP_005262307 (OMIM: 300429,300607) PREDICTED: rho ( 495) 285 61.5 7e-09
NP_056000 (OMIM: 300429,300607) rho guanine nucleo ( 516) 285 61.5 7.2e-09
XP_011529192 (OMIM: 300429,300607) PREDICTED: rho ( 516) 285 61.5 7.2e-09
XP_016884855 (OMIM: 300429,300607) PREDICTED: rho ( 516) 285 61.5 7.2e-09
XP_016884854 (OMIM: 300429,300607) PREDICTED: rho ( 516) 285 61.5 7.2e-09
XP_016884852 (OMIM: 300429,300607) PREDICTED: rho ( 521) 285 61.5 7.2e-09
XP_016884853 (OMIM: 300429,300607) PREDICTED: rho ( 521) 285 61.5 7.2e-09
XP_005262306 (OMIM: 300429,300607) PREDICTED: rho ( 523) 285 61.5 7.3e-09
XP_011508491 (OMIM: 605708) PREDICTED: rho guanine ( 945) 287 62.0 9.1e-09
XP_016883921 (OMIM: 602442) PREDICTED: intersectin (1660) 290 62.7 9.9e-09
XP_016883920 (OMIM: 602442) PREDICTED: intersectin (1665) 290 62.7 9.9e-09
XP_005245690 (OMIM: 605708) PREDICTED: rho guanine (1141) 287 62.1 1.1e-08
XP_011508489 (OMIM: 605708) PREDICTED: rho guanine (1485) 287 62.1 1.3e-08
NP_055599 (OMIM: 605708) rho guanine nucleotide ex (1522) 287 62.2 1.3e-08
XP_016858413 (OMIM: 605708) PREDICTED: rho guanine (1523) 287 62.2 1.3e-08
>>NP_062455 (OMIM: 612115) rho guanine nucleotide exchan (526 aa)
initn: 3503 init1: 3503 opt: 3503 Z-score: 3349.6 bits: 629.5 E(85289): 7.7e-180
Smith-Waterman score: 3503; 100.0% identity (100.0% similar) in 526 aa overlap (1-526:1-526)
10 20 30 40 50 60
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSLANLIPPVKATPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSLANLIPPVKATPL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQMLTSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 KRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQMLTSKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 IKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 IKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 LSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 CLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 CLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 INTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLFQEVLVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 INTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLFQEVLVI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFFRVSFKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 TRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFFRVSFKN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGSRELQGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 GSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGSRELQGE
430 440 450 460 470 480
490 500 510 520
pF1KB8 TKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
::::::::::::::::::::::::::::::::::::::::::::::
NP_062 TKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
490 500 510 520
>>XP_011532068 (OMIM: 612115) PREDICTED: rho guanine nuc (527 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3151.2 bits: 592.7 E(85289): 8.7e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:14-527)
10 20 30 40 50
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSLANLIPPVKATP
:: . . . .: . : :::::::::::::::::::::::::::
XP_011 MFPSPKAWNFRGRKRKQSTQDEDAVSLCSLDISEPSNKRVKPLSRVTSLANLIPPVKATP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 LKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQMLTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQMLTSK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 EIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 LLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 RCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 EINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLFQEVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLFQEVLV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 ITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFFRVSFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFFRVSFK
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 NGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGSRELQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGSRELQG
430 440 450 460 470 480
480 490 500 510 520
pF1KB8 ETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
490 500 510 520
>>XP_011532067 (OMIM: 612115) PREDICTED: rho guanine nuc (527 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3151.2 bits: 592.7 E(85289): 8.7e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:14-527)
10 20 30 40 50
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSLANLIPPVKATP
:: . . . .: . : :::::::::::::::::::::::::::
XP_011 MFPSPKAWNFRGRKRKQSTQDEDAVSLCSLDISEPSNKRVKPLSRVTSLANLIPPVKATP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 LKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQMLTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQMLTSK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 EIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 LLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 RCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 EINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLFQEVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLFQEVLV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 ITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFFRVSFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFFRVSFK
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 NGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGSRELQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGSRELQG
430 440 450 460 470 480
480 490 500 510 520
pF1KB8 ETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
490 500 510 520
>>NP_001276627 (OMIM: 612115) rho guanine nucleotide exc (532 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3151.2 bits: 592.7 E(85289): 8.8e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:19-532)
10 20 30 40 50
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSLANLIPP
:: . . . .: . : ::::::::::::::::::::::
NP_001 MRSERPMVWCCLFVRSQRKRKQSTQDEDAVSLCSLDISEPSNKRVKPLSRVTSLANLIPP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 MLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 PLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 QDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINII
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 QGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLF
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 QEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 RVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGS
430 440 450 460 470 480
480 490 500 510 520
pF1KB8 RELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
490 500 510 520 530
>>XP_016861991 (OMIM: 612115) PREDICTED: rho guanine nuc (538 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3151.1 bits: 592.7 E(85289): 8.9e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:25-538)
10 20 30 40
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSL
:: . . . .: . : ::::::::::::::::
XP_016 MPKRQRQNNFPMFPSPKAWNFRGRKRKQSTQDEDAVSLCSLDISEPSNKRVKPLSRVTSL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 ANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETF
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 DVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 TLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHK
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 KQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLE
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB8 EAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVK
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB8 LHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNE
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB8 RIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFL
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB8 NPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
490 500 510 520 530
>>XP_011532066 (OMIM: 612115) PREDICTED: rho guanine nuc (544 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3151.0 bits: 592.8 E(85289): 8.9e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:31-544)
10 20 30 40
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPL
:: . . . .: . : ::::::::::
XP_011 MFDRNIWPKRQRQNNFPMFPSPKAWNFRGRKRKQSTQDEDAVSLCSLDISEPSNKRVKPL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB8 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB8 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB8 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB8 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
490 500 510 520 530 540
pF1KB8 ESNV
::::
XP_011 ESNV
>>NP_001122087 (OMIM: 612115) rho guanine nucleotide exc (558 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3150.9 bits: 592.8 E(85289): 9.1e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:45-558)
10 20 30 40
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPL
:: . . . .: . : ::::::::::
NP_001 MEENKERPKRQRQNNFPMFPSPKAWNFRGRKRKQSTQDEDAVSLCSLDISEPSNKRVKPL
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB8 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB8 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB8 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB8 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB8 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB8 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
380 390 400 410 420 430
410 420 430 440 450 460
pF1KB8 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
440 450 460 470 480 490
470 480 490 500 510 520
pF1KB8 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
500 510 520 530 540 550
pF1KB8 ESNV
::::
NP_001 ESNV
>>XP_005265244 (OMIM: 612115) PREDICTED: rho guanine nuc (558 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3150.9 bits: 592.8 E(85289): 9.1e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:45-558)
10 20 30 40
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPL
:: . . . .: . : ::::::::::
XP_005 MEENKERPKRQRQNNFPMFPSPKAWNFRGRKRKQSTQDEDAVSLCSLDISEPSNKRVKPL
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB8 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB8 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB8 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB8 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB8 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB8 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
380 390 400 410 420 430
410 420 430 440 450 460
pF1KB8 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
440 450 460 470 480 490
470 480 490 500 510 520
pF1KB8 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
500 510 520 530 540 550
pF1KB8 ESNV
::::
XP_005 ESNV
>>XP_005265243 (OMIM: 612115) PREDICTED: rho guanine nuc (558 aa)
initn: 3295 init1: 3295 opt: 3295 Z-score: 3150.9 bits: 592.8 E(85289): 9.1e-169
Smith-Waterman score: 3295; 96.9% identity (97.9% similar) in 514 aa overlap (13-526:45-558)
10 20 30 40
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPL
:: . . . .: . : ::::::::::
XP_005 MEENKERPKRQRQNNFPMFPSPKAWNFRGRKRKQSTQDEDAVSLCSLDISEPSNKRVKPL
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB8 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRVTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB8 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQE
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB8 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAK
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB8 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNP
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB8 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELK
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB8 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRG
380 390 400 410 420 430
410 420 430 440 450 460
pF1KB8 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLD
440 450 460 470 480 490
470 480 490 500 510 520
pF1KB8 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHG
500 510 520 530 540 550
pF1KB8 ESNV
::::
XP_005 ESNV
>>NP_001122088 (OMIM: 612115) rho guanine nucleotide exc (532 aa)
initn: 3287 init1: 3287 opt: 3292 Z-score: 3148.3 bits: 592.2 E(85289): 1.3e-168
Smith-Waterman score: 3292; 97.3% identity (98.2% similar) in 510 aa overlap (17-526:23-532)
10 20 30 40 50
pF1KB8 MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSLANLIPP
: : .. . ..::::::::::::::::::::::
NP_001 MIEVCHHNWLLWLCPSKFGIFMCCLASTTGQMELRRTREPSNKRVKPLSRVTSLANLIPP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDVCVNQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 MLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 PLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 QDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINII
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 QGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVLCCHGELKNNRGVKLHVFLF
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 QEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSLRGAFSNNERIKNFF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 RVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQAGVLDSEGSFLNPTTGS
430 440 450 460 470 480
480 490 500 510 520
pF1KB8 RELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSCGNSRHGESNV
490 500 510 520 530
526 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:54:37 2016 done: Fri Nov 4 12:54:39 2016
Total Scan time: 10.710 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]