Result of FASTA (omim) for
pF1KB8333
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8333, 313 aa
1>>>pF1KB8333 313 - 313 aa - 313 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0430+/-0.000402; mu= 17.3676+/- 0.025
mean_var=69.5191+/-13.740, 0's: 0 Z-trim(112.9): 110 B-trim: 1234 in 1/49
Lambda= 0.153823
statistics sampled from 21856 (21971) to 21856 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.258), width: 16
Scan time: 4.570
The best scores are: opt bits E(85289)
NP_001129522 (OMIM: 610410) dehydrogenase/reductas ( 313) 2085 471.8 7.9e-133
NP_612461 (OMIM: 610410) dehydrogenase/reductase S ( 313) 2085 471.8 7.9e-133
NP_060911 (OMIM: 605843) peroxisomal trans-2-enoyl ( 303) 229 59.9 7.6e-09
NP_055049 (OMIM: 601417) estradiol 17-beta-dehydro ( 261) 228 59.6 7.8e-09
NP_077284 (OMIM: 616159) dehydrogenase/reductase S ( 260) 223 58.5 1.7e-08
NP_001317504 (OMIM: 222745) 2,4-dienoyl-CoA reduct ( 326) 216 57.0 5.9e-08
XP_016868636 (OMIM: 222745) PREDICTED: 2,4-dienoyl ( 326) 216 57.0 5.9e-08
XP_011515182 (OMIM: 222745) PREDICTED: 2,4-dienoyl ( 326) 216 57.0 5.9e-08
XP_016868637 (OMIM: 222745) PREDICTED: 2,4-dienoyl ( 326) 216 57.0 5.9e-08
NP_001350 (OMIM: 222745) 2,4-dienoyl-CoA reductase ( 335) 216 57.0 6e-08
NP_057110 (OMIM: 607849,616108) retinol dehydrogen ( 318) 209 55.5 1.7e-07
NP_689656 (OMIM: 608830,612712) retinol dehydrogen ( 316) 204 54.4 3.7e-07
NP_066284 (OMIM: 611596) dehydrogenase/reductase S ( 278) 199 53.2 7.1e-07
NP_001193670 (OMIM: 600713,614662) corticosteroid ( 292) 197 52.8 1e-06
NP_861420 (OMIM: 600713,614662) corticosteroid 11- ( 292) 197 52.8 1e-06
NP_005516 (OMIM: 600713,614662) corticosteroid 11- ( 292) 197 52.8 1e-06
NP_004744 (OMIM: 612830) short-chain dehydrogenase ( 302) 197 52.8 1e-06
XP_005257715 (OMIM: 616159) PREDICTED: dehydrogena ( 229) 195 52.3 1.1e-06
NP_002026 (OMIM: 136440) 3-ketodihydrosphingosine ( 332) 189 51.0 3.8e-06
XP_005259027 (OMIM: 612832) PREDICTED: 17-beta-hyd ( 140) 184 49.7 4.2e-06
XP_005259026 (OMIM: 612832) PREDICTED: 17-beta-hyd ( 212) 184 49.8 5.8e-06
XP_006720064 (OMIM: 615194) PREDICTED: dehydrogena ( 280) 185 50.1 6.2e-06
NP_005785 (OMIM: 615194) dehydrogenase/reductase S ( 280) 185 50.1 6.2e-06
XP_005267306 (OMIM: 615194) PREDICTED: dehydrogena ( 280) 185 50.1 6.2e-06
NP_057330 (OMIM: 612832) 17-beta-hydroxysteroid de ( 270) 184 49.9 7e-06
NP_000851 (OMIM: 119900,259100,601688) 15-hydroxyp ( 266) 183 49.6 8.1e-06
NP_878912 (OMIM: 615194) dehydrogenase/reductase S ( 300) 182 49.5 1e-05
NP_000405 (OMIM: 233400,261515,601860) peroxisomal ( 736) 185 50.4 1.3e-05
XP_005266734 (OMIM: 136440) PREDICTED: 3-ketodihyd ( 298) 180 49.0 1.4e-05
NP_653284 (OMIM: 616157) dehydrogenase/reductase S ( 377) 180 49.1 1.7e-05
NP_620419 (OMIM: 608989) epidermal retinol dehydro ( 309) 178 48.6 2e-05
NP_001304978 (OMIM: 608989) epidermal retinol dehy ( 318) 178 48.6 2e-05
NP_001243234 (OMIM: 119900,259100,601688) 15-hydro ( 143) 169 46.3 4.3e-05
XP_011530209 (OMIM: 119900,259100,601688) PREDICTE ( 176) 169 46.4 5.1e-05
NP_001139288 (OMIM: 119900,259100,601688) 15-hydro ( 178) 169 46.4 5.1e-05
NP_001317148 (OMIM: 109684) estradiol 17-beta-dehy ( 329) 169 46.6 8.2e-05
NP_932349 (OMIM: 615196) dehydrogenase/reductase S ( 232) 167 46.0 8.5e-05
XP_011523031 (OMIM: 109684) PREDICTED: estradiol 1 ( 384) 169 46.7 9.3e-05
NP_003115 (OMIM: 182125,612716) sepiapterin reduct ( 261) 166 45.9 0.00011
NP_065715 (OMIM: 615839) peroxisomal 2,4-dienoyl-C ( 292) 163 45.2 0.00019
NP_000404 (OMIM: 109684) estradiol 17-beta-dehydro ( 328) 163 45.3 0.00021
NP_057329 (OMIM: 612831) estradiol 17-beta-dehydro ( 300) 162 45.0 0.00022
XP_011523032 (OMIM: 109684) PREDICTED: estradiol 1 ( 383) 163 45.3 0.00023
NP_057226 (OMIM: 609574) very-long-chain 3-oxoacyl ( 312) 161 44.8 0.00027
NP_057113 (OMIM: 612833) dehydrogenase/reductase S ( 339) 161 44.8 0.00029
NP_001239579 (OMIM: 607849,616108) retinol dehydro ( 248) 159 44.3 0.00031
XP_016876857 (OMIM: 612833) PREDICTED: dehydrogena ( 404) 161 44.9 0.00033
NP_001309209 (OMIM: 612833) dehydrogenase/reductas ( 289) 159 44.3 0.00035
NP_001317088 (OMIM: 616160) dehydrogenase/reductas ( 310) 159 44.4 0.00036
XP_016879915 (OMIM: 616160) PREDICTED: dehydrogena ( 325) 159 44.4 0.00038
>>NP_001129522 (OMIM: 610410) dehydrogenase/reductase SD (313 aa)
initn: 2085 init1: 2085 opt: 2085 Z-score: 2505.6 bits: 471.8 E(85289): 7.9e-133
Smith-Waterman score: 2085; 99.7% identity (100.0% similar) in 313 aa overlap (1-313:1-313)
10 20 30 40 50 60
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSSVLSHVSGLGWLASYLPSFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSSVLSHVSGLGWLASYLPSFLR
250 260 270 280 290 300
310
pF1KB8 VPRWIIALYTSKF
::.::::::::::
NP_001 VPKWIIALYTSKF
310
>>NP_612461 (OMIM: 610410) dehydrogenase/reductase SDR f (313 aa)
initn: 2085 init1: 2085 opt: 2085 Z-score: 2505.6 bits: 471.8 E(85289): 7.9e-133
Smith-Waterman score: 2085; 99.7% identity (100.0% similar) in 313 aa overlap (1-313:1-313)
10 20 30 40 50 60
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSSVLSHVSGLGWLASYLPSFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 TDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSSVLSHVSGLGWLASYLPSFLR
250 260 270 280 290 300
310
pF1KB8 VPRWIIALYTSKF
::.::::::::::
NP_612 VPKWIIALYTSKF
310
>>NP_060911 (OMIM: 605843) peroxisomal trans-2-enoyl-CoA (303 aa)
initn: 125 init1: 125 opt: 229 Z-score: 279.8 bits: 59.9 E(85289): 7.6e-09
Smith-Waterman score: 229; 27.8% identity (59.9% similar) in 212 aa overlap (3-204:12-212)
10 20 30 40
pF1KB8 MAAP--MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQ
:: ..::: .:::.. :::..:. .: . :..: :..:.:. :. .:.
NP_060 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 EAQ-----SLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTR
: : . .. .:. :. .: :: .: ... . :... ::::. : : . ..
NP_060 ELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST-LDTFGKINFLVNNG--GGQFLSPAE
70 80 90 100 110
110 120 130 140 150 160
pF1KB8 NKAFWETPASMWDDINNVGLRG-HYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPY
. . .. : . ...: : :.:.. . : : : :: : : . . . :
NP_060 HIS-----SKGWHAVLETNLTGTFYMCKAVYSSWMKEHG-GSIVNIIVPTKAGFPLAVHS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB8 GVGKAACDKLAADCAHELRRHGV--SCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKS
:...:. .:. . : : :. .::. ::.. .. :.
NP_060 GAARAGVYNLTKSLALEWACSGIRINCVA--PGVIYSQTAVENYGSWGQSFFEGSFQKIP
180 190 200 210 220
230 240 250 260 270 280
pF1KB8 AFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSSV
NP_060 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSV
230 240 250 260 270 280
>>NP_055049 (OMIM: 601417) estradiol 17-beta-dehydrogena (261 aa)
initn: 181 init1: 91 opt: 228 Z-score: 279.5 bits: 59.6 E(85289): 7.8e-09
Smith-Waterman score: 228; 29.7% identity (57.5% similar) in 212 aa overlap (5-203:9-209)
10 20 30 40 50
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA-QSLG
. . . .::::. ::::.....: :::: : :..:::. . ::
NP_055 MASQLQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAAC----DLDRAAAQETVRLLG
10 20 30 40 50
60 70 80 90 100
pF1KB8 G----QCVP------VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRN
: . : : :. .: :.:::. . .:.:. : :. :..
NP_055 GPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA--GI-----TQD
60 70 80 90 100
110 120 130 140 150 160
pF1KB8 KAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSP-GSLQYMFNVPY
. . . . :: . :.:.: .. . .:. .: : .: :. ::: :.. . .. :
NP_055 EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNY
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB8 GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAF
...::. :. :.:: :::. : :. ::.. : . ..
NP_055 AASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGD
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB8 SSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSSVLS
NP_055 PEDVADVVAFLASEDSGYITGTSVEVTGGLFM
230 240 250 260
>>NP_077284 (OMIM: 616159) dehydrogenase/reductase SDR f (260 aa)
initn: 82 init1: 64 opt: 223 Z-score: 273.6 bits: 58.5 E(85289): 1.7e-08
Smith-Waterman score: 223; 29.2% identity (57.9% similar) in 209 aa overlap (8-204:12-210)
10 20 30 40 50
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-
.. .::::: ::: ..: : . : : .: . ... .: : .: :
NP_077 MARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 -GQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPAS
: .: :: :.: .. :.: . : :.. .:. .:: ::. .: .. .:
NP_077 PGTLIPYRCDLSNEEDILSMFSAI-RSQHSGVDICINN--AGL-----ARPDTLLSGSTS
70 80 90 100 110
120 130 140 150 160
pF1KB8 MWDDINNVGLRGHYFCS--VYGARLMVPAGQGLIVVISSPGSLQYM-FNVP--YGVGKAA
: :. ::.. . .:. .: . . .: :. :.: .. . . ..: :.. : :
NP_077 GWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYA
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB8 CDKLAADCAHELRR---H-GVSCVSLWPGIVQTEL-LKEHMAKEEVLQDPVLKQFKSAFS
:. .:::. : ..:.: ::.:.:.. .: :
NP_077 VTALTEGLRQELREAQTHIRATCIS--PGVVETQFAFKLHDKDPEKAAATYEQMKCLKPE
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB8 SAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSSVLSH
NP_077 DVAEAVIYVLSTPAHIQIGDIQMRPTEQVT
240 250 260
>>NP_001317504 (OMIM: 222745) 2,4-dienoyl-CoA reductase, (326 aa)
initn: 101 init1: 61 opt: 216 Z-score: 263.8 bits: 57.0 E(85289): 5.9e-08
Smith-Waterman score: 216; 24.0% identity (58.7% similar) in 196 aa overlap (7-199:50-237)
10 20 30
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYI
:.: .::.. :.:.:.. : . :: :
NP_001 TKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 TGRHLDTLRVVAQEAQSLGGQCVPVV-CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYA
..:..:.:...:.. .: :. : .. :: . . :.. .. . :. ....::: :
NP_001 ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHPNIVINNA-A
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 GVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG--LIVVISSPG
: : . . .: . : :... : : : .. .. .. : .: .. . . .
NP_001 G-----NFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB8 SLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQD
: :: . .::. . .. . : : ..:. . :: ..:.
NP_001 ETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB8 PVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQ
NP_001 EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE
260 270 280 290 300 310
>>XP_016868636 (OMIM: 222745) PREDICTED: 2,4-dienoyl-CoA (326 aa)
initn: 101 init1: 61 opt: 216 Z-score: 263.8 bits: 57.0 E(85289): 5.9e-08
Smith-Waterman score: 216; 24.0% identity (58.7% similar) in 196 aa overlap (7-199:50-237)
10 20 30
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYI
:.: .::.. :.:.:.. : . :: :
XP_016 TKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 TGRHLDTLRVVAQEAQSLGGQCVPVV-CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYA
..:..:.:...:.. .: :. : .. :: . . :.. .. . :. ....::: :
XP_016 ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHPNIVINNA-A
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 GVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG--LIVVISSPG
: : . . .: . : :... : : : .. .. .. : .: .. . . .
XP_016 G-----NFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB8 SLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQD
: :: . .::. . .. . : : ..:. . :: ..:.
XP_016 ETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB8 PVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQ
XP_016 EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE
260 270 280 290 300 310
>>XP_011515182 (OMIM: 222745) PREDICTED: 2,4-dienoyl-CoA (326 aa)
initn: 101 init1: 61 opt: 216 Z-score: 263.8 bits: 57.0 E(85289): 5.9e-08
Smith-Waterman score: 216; 24.0% identity (58.7% similar) in 196 aa overlap (7-199:50-237)
10 20 30
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYI
:.: .::.. :.:.:.. : . :: :
XP_011 TKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 TGRHLDTLRVVAQEAQSLGGQCVPVV-CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYA
..:..:.:...:.. .: :. : .. :: . . :.. .. . :. ....::: :
XP_011 ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHPNIVINNA-A
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 GVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG--LIVVISSPG
: : . . .: . : :... : : : .. .. .. : .: .. . . .
XP_011 G-----NFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB8 SLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQD
: :: . .::. . .. . : : ..:. . :: ..:.
XP_011 ETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB8 PVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQ
XP_011 EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE
260 270 280 290 300 310
>>XP_016868637 (OMIM: 222745) PREDICTED: 2,4-dienoyl-CoA (326 aa)
initn: 101 init1: 61 opt: 216 Z-score: 263.8 bits: 57.0 E(85289): 5.9e-08
Smith-Waterman score: 216; 24.0% identity (58.7% similar) in 196 aa overlap (7-199:50-237)
10 20 30
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYI
:.: .::.. :.:.:.. : . :: :
XP_016 TKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 TGRHLDTLRVVAQEAQSLGGQCVPVV-CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYA
..:..:.:...:.. .: :. : .. :: . . :.. .. . :. ....::: :
XP_016 ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHPNIVINNA-A
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 GVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG--LIVVISSPG
: : . . .: . : :... : : : .. .. .. : .: .. . . .
XP_016 G-----NFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB8 SLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQD
: :: . .::. . .. . : : ..:. . :: ..:.
XP_016 ETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB8 PVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQ
XP_016 EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE
260 270 280 290 300 310
>>NP_001350 (OMIM: 222745) 2,4-dienoyl-CoA reductase, mi (335 aa)
initn: 101 init1: 61 opt: 216 Z-score: 263.6 bits: 57.0 E(85289): 6e-08
Smith-Waterman score: 216; 24.0% identity (58.7% similar) in 196 aa overlap (7-199:59-246)
10 20 30
pF1KB8 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYI
:.: .::.. :.:.:.. : . :: :
NP_001 TKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVI
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB8 TGRHLDTLRVVAQEAQSLGGQCVPVV-CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYA
..:..:.:...:.. .: :. : .. :: . . :.. .. . :. ....::: :
NP_001 ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHPNIVINNA-A
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB8 GVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG--LIVVISSPG
: : . . .: . : :... : : : .. .. .. : .: .. . . .
NP_001 G-----NFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB8 SLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQD
: :: . .::. . .. . : : ..:. . :: ..:.
NP_001 ETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK
210 220 230 240 250 260
220 230 240 250 260 270
pF1KB8 PVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQ
NP_001 EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE
270 280 290 300 310 320
313 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:51:03 2016 done: Fri Nov 4 11:51:04 2016
Total Scan time: 4.570 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]