Result of FASTA (omim) for
pF1KB8329
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8329, 215 aa
1>>>pF1KB8329 215 - 215 aa - 215 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4278+/-0.00043; mu= 18.9204+/- 0.027
mean_var=85.5989+/-17.563, 0's: 0 Z-trim(111.4): 449 B-trim: 457 in 1/55
Lambda= 0.138625
statistics sampled from 19511 (20034) to 19511 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.235), width: 16
Scan time: 4.640
The best scores are: opt bits E(85289)
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 1391 288.1 7.6e-78
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 1391 288.1 7.6e-78
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 1391 288.1 7.6e-78
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 1391 288.1 7.6e-78
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1190 247.9 9.6e-66
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 1190 247.9 9.6e-66
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1190 247.9 9.6e-66
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 1190 247.9 9.6e-66
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 1190 248.0 1e-65
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 1178 245.5 5e-65
NP_001278977 (OMIM: 179512) ras-related protein Ra ( 201) 806 171.0 1.2e-42
NP_001238966 (OMIM: 179514) ras-related protein Ra ( 174) 696 149.0 4.6e-36
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 615 132.8 3.7e-31
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 586 127.0 2.1e-29
XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244) 562 122.3 6.6e-28
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212) 559 121.7 9.2e-28
XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248) 559 121.8 1e-27
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 537 117.2 1.9e-26
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 522 114.3 1.5e-25
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 518 113.4 2.6e-25
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 514 112.7 4.7e-25
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 510 111.9 8.1e-25
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 505 110.9 1.7e-24
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 498 109.5 4.4e-24
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225) 494 108.7 7.8e-24
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 488 107.5 1.7e-23
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 486 107.1 2.3e-23
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 486 107.1 2.3e-23
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 486 107.1 2.4e-23
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 483 106.4 3.4e-23
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 483 106.5 3.5e-23
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 481 106.1 4.7e-23
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254) 479 105.8 6.7e-23
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 477 105.2 7.6e-23
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 477 105.3 7.8e-23
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 475 104.8 1e-22
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 472 104.2 1.5e-22
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 472 104.2 1.5e-22
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 472 104.2 1.5e-22
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 472 104.2 1.5e-22
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 471 104.1 1.8e-22
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 463 102.5 5.5e-22
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 463 102.5 5.6e-22
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 461 102.1 7.4e-22
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 455 100.9 1.7e-21
NP_570137 (OMIM: 612415) ras-related protein Rab-2 ( 203) 453 100.4 2.2e-21
NP_001026847 (OMIM: 612415) ras-related protein Ra ( 203) 453 100.4 2.2e-21
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 453 100.5 2.3e-21
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 452 100.2 2.5e-21
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 443 98.4 8.6e-21
>>XP_005269109 (OMIM: 179514) PREDICTED: ras-related pro (215 aa)
initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78
Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::::::::::::::::::::::::::::::::::
XP_005 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>XP_005269108 (OMIM: 179514) PREDICTED: ras-related pro (215 aa)
initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78
Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::::::::::::::::::::::::::::::::::
XP_005 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>NP_001238965 (OMIM: 179514) ras-related protein Rab-5B (215 aa)
initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78
Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::::::::::::::::::::::::::::::::::
NP_001 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>NP_002859 (OMIM: 179514) ras-related protein Rab-5B is (215 aa)
initn: 1391 init1: 1391 opt: 1391 Z-score: 1518.6 bits: 288.1 E(85289): 7.6e-78
Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::::::::::::::::::::::::::::::::::
NP_002 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>NP_958842 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
NP_958 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
NP_958 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
NP_958 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
NP_958 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>XP_011523392 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
NP_004 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
NP_004 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1301.3 bits: 247.9 E(85289): 9.6e-66
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>NP_001238968 (OMIM: 604037) ras-related protein Rab-5C (249 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1300.7 bits: 248.0 E(85289): 1e-65
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:34-249)
10 20
pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGES
:..:. .::::: ..:::::::::::::
NP_001 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGES
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB8 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_001 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB8 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ
::::::::::::::: .::::::.:::::::::::.:::::::::::::.:: ::..:::
NP_001 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNK
::::::::::::::::::::::..:.::::::::.:::: :: ::.:::::.:.. ..
NP_001 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
190 200 210 220 230 240
210
pF1KB8 SQCCSN
::::::
NP_001 SQCCSN
>>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is (215 aa)
initn: 1178 init1: 1178 opt: 1178 Z-score: 1288.4 bits: 245.5 E(85289): 5e-65
Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
NP_004 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
NP_004 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
NP_004 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
130 140 150 160 170 180
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
NP_004 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
190 200 210
215 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:48:35 2016 done: Fri Nov 4 11:48:36 2016
Total Scan time: 4.640 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]