Result of FASTA (ccds) for
pF1KB8329
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8329, 215 aa
1>>>pF1KB8329 215 - 215 aa - 215 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1532+/-0.000966; mu= 14.1317+/- 0.059
mean_var=72.9833+/-14.700, 0's: 0 Z-trim(105.1): 214 B-trim: 239 in 1/50
Lambda= 0.150128
statistics sampled from 7990 (8232) to 7990 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.253), width: 16
Scan time: 1.600
The best scores are: opt bits E(32554)
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 1391 310.5 5e-85
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 1190 267.0 6.4e-72
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 1190 267.0 7.1e-72
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 1178 264.4 3.8e-71
CCDS77710.1 RAB5A gene_id:5868|Hs108|chr3 ( 201) 806 183.8 6.6e-47
CCDS58244.1 RAB5B gene_id:5869|Hs108|chr12 ( 174) 696 159.9 8.7e-40
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 615 142.4 1.8e-34
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 586 136.1 1.4e-32
CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 ( 212) 559 130.3 8.7e-31
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 537 125.6 2.3e-29
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 522 122.3 2.2e-28
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 518 121.4 3.9e-28
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 514 120.6 7.4e-28
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 510 119.7 1.3e-27
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 505 118.6 2.9e-27
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 498 117.1 8.4e-27
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 494 116.3 1.6e-26
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 488 114.9 3.7e-26
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 ( 213) 486 114.5 5e-26
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 486 114.5 5.1e-26
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 486 114.5 5.3e-26
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 483 113.9 7.6e-26
CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 ( 254) 484 114.1 7.8e-26
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 483 113.9 8e-26
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 481 113.4 1.1e-25
CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 ( 254) 479 113.1 1.6e-25
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 477 112.5 1.8e-25
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 477 112.6 1.9e-25
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 472 111.5 4e-25
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 471 111.3 4.8e-25
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 469 110.8 6.5e-25
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 463 109.5 1.6e-24
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 463 109.5 1.6e-24
CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX ( 221) 463 109.5 1.6e-24
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 455 107.8 5.1e-24
CCDS34300.1 RAB24 gene_id:53917|Hs108|chr5 ( 203) 453 107.4 6.9e-24
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 453 107.4 7.3e-24
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 452 107.1 7.9e-24
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 448 106.3 1.5e-23
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 443 105.2 3e-23
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 444 105.5 3.2e-23
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 438 104.1 6.9e-23
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 435 103.4 8.3e-23
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 430 102.4 2.2e-22
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 429 102.1 2.4e-22
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 424 101.1 5.7e-22
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 423 100.9 6.4e-22
CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 ( 175) 420 100.2 8.7e-22
CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX ( 237) 420 100.3 1.1e-21
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 410 98.1 4.8e-21
>>CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 (215 aa)
initn: 1391 init1: 1391 opt: 1391 Z-score: 1640.0 bits: 310.5 E(32554): 5e-85
Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::::::::::::::::::::::::::::::::::
CCDS89 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 (216 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1404.7 bits: 267.0 E(32554): 6.4e-72
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
CCDS11 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
CCDS11 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB8 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
CCDS11 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 (249 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1403.8 bits: 267.0 E(32554): 7.1e-72
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-215:34-249)
10 20
pF1KB8 MTSRS-TARPNGQPQASKICQFKLVLLGES
:..:. .::::: ..:::::::::::::
CCDS58 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGES
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB8 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS58 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB8 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ
::::::::::::::: .::::::.:::::::::::.:::::::::::::.:: ::..:::
CCDS58 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNK
::::::::::::::::::::::..:.::::::::.:::: :: ::.:::::.:.. ..
CCDS58 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
190 200 210 220 230 240
210
pF1KB8 SQCCSN
::::::
CCDS58 SQCCSN
>>CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 (215 aa)
initn: 1178 init1: 1178 opt: 1178 Z-score: 1390.7 bits: 264.4 E(32554): 3.8e-71
Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
CCDS26 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
CCDS26 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
CCDS26 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
130 140 150 160 170 180
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
CCDS26 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
190 200 210
>>CCDS77710.1 RAB5A gene_id:5868|Hs108|chr3 (201 aa)
initn: 806 init1: 806 opt: 806 Z-score: 955.6 bits: 183.8 E(32554): 6.6e-47
Smith-Waterman score: 1054; 75.8% identity (89.3% similar) in 215 aa overlap (1-215:1-201)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::
CCDS77 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG------
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
CCDS77 --------VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
60 70 80 90 100
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
CCDS77 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
110 120 130 140 150 160
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
CCDS77 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
170 180 190 200
>>CCDS58244.1 RAB5B gene_id:5869|Hs108|chr12 (174 aa)
initn: 696 init1: 696 opt: 696 Z-score: 827.8 bits: 159.9 E(32554): 8.7e-40
Smith-Waterman score: 1043; 80.9% identity (80.9% similar) in 215 aa overlap (1-215:1-174)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQE--------------
70 80 90 100
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
:::::::::::::::::::::::::::::::::
CCDS58 ---------------------------AQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
110 120 130
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
:::::::::::::::::::::::::::::::::::
CCDS58 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
140 150 160 170
>>CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 (194 aa)
initn: 611 init1: 574 opt: 615 Z-score: 732.3 bits: 142.4 E(32554): 1.8e-34
Smith-Waterman score: 615; 49.0% identity (79.4% similar) in 194 aa overlap (20-213:5-194)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
..:. :::...:::::.: :::. .: . ::::.:.:.
CCDS33 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTK
10 20 30 40
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
.: .. :: :::::::::...::::::::. :::.:::::..:::. :.:::::..
CCDS33 TVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
.. :.::.:.:::: :: . : : ..:. :::. .:.:::::.:.:.:.::. :...
CCDS33 HGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR
110 120 130 140 150 160
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
.:... :: .: ..: :..: .. : .::
CCDS33 IPSTDA-NL--PSG-GKGFKLRRQPSEPKRSCC
170 180 190
>>CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 (195 aa)
initn: 581 init1: 557 opt: 586 Z-score: 698.3 bits: 136.1 E(32554): 1.4e-32
Smith-Waterman score: 586; 45.4% identity (76.5% similar) in 196 aa overlap (18-213:4-195)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
: ..:. :::...:::::.: :::. .: . ::::.:.:.
CCDS45 MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTK
10 20 30 40
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
.: . :: :::::::::.::::::::::. ::..:::::.:..: : :::::..
CCDS45 TVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
.. .::.:.:::: ::.. : : ..:. ::.. . . .:::::.:.:...:: .:...
CCDS45 HGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQ
110 120 130 140 150 160
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
.: .:.. .: : . ... ..: . .::
CCDS45 IPPLDPHE-NGNNGT---IKVEKPTMQASRRCC
170 180 190
>>CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 (212 aa)
initn: 455 init1: 267 opt: 559 Z-score: 666.2 bits: 130.3 E(32554): 8.7e-31
Smith-Waterman score: 559; 41.2% identity (76.8% similar) in 211 aa overlap (6-215:7-212)
10 20 30 40 50
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
: .: . :. .. ::::::: ..::::::.::.::..:. :.: ::.:
CCDS25 MAQAHRTPQPRAAPSQPRV--FKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFT
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
. : . :..:.:::::::::.:::. .:.:::.::..::::: ...: .:. :.:.:.
CCDS25 KVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 RQASPS-IVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA
.. :. ... :.:::.::...: : ..:.. .::...::::::::: .:...: ..:
CCDS25 EELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVA
120 130 140 150 160 170
180 190 200 210
pF1KB8 KKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
..: . .. : : :. .. ... ...::..
CCDS25 QELLQRSDEE--GQALRGDAAVALNKGPARQAKCCAH
180 190 200 210
>>CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 (205 aa)
initn: 532 init1: 514 opt: 537 Z-score: 640.7 bits: 125.6 E(32554): 2.3e-29
Smith-Waterman score: 537; 43.4% identity (75.5% similar) in 196 aa overlap (21-213:12-205)
10 20 30 40 50 60
pF1KB8 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
:::.:.:.:.:::: :.:::. . : ::::. : .
CCDS46 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIR
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
.. :: :.:..:::::::::..... :::::.. :::::.:.::.: .: :..:..:
CCDS46 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
:: .. :.::: ::..:..:.: :. .::. .. :.:::::.: ::.. :...: .
CCDS46 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE
120 130 140 150 160 170
190 200 210
pF1KB8 LPKSEPQNLGGAAGRSRGVDLHEQS---QQNKSQCCSN
. : .. :..:: .. ... :: .:. . ::
CCDS46 IKKR--MGPGATAGGAEKSNVKIQSTPVKQSGGGCC
180 190 200
215 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:48:34 2016 done: Fri Nov 4 11:48:35 2016
Total Scan time: 1.600 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]