Result of FASTA (omim) for
pF1KB8232
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8232, 316 aa
1>>>pF1KB8232 316 - 316 aa - 316 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8621+/-0.000391; mu= 18.3607+/- 0.024
mean_var=59.0869+/-11.946, 0's: 0 Z-trim(112.1): 28 B-trim: 634 in 1/55
Lambda= 0.166851
statistics sampled from 20934 (20956) to 20934 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.246), width: 16
Scan time: 7.200
The best scores are: opt bits E(85289)
NP_001505 (OMIM: 189963) transcription initiation ( 316) 2081 509.2 4.3e-144
XP_011539601 (OMIM: 189963) PREDICTED: transcripti ( 285) 1869 458.2 9.1e-129
XP_011534974 (OMIM: 604902,616202) PREDICTED: tran ( 632) 246 67.7 7e-11
XP_005267618 (OMIM: 604902,616202) PREDICTED: tran ( 676) 246 67.7 7.4e-11
NP_001510 (OMIM: 604902,616202) transcription fact ( 677) 246 67.7 7.4e-11
NP_001229717 (OMIM: 604902,616202) transcription f ( 650) 228 63.4 1.5e-09
NP_001229716 (OMIM: 604902,616202) transcription f ( 562) 190 54.2 7.3e-07
NP_001229715 (OMIM: 604902,616202) transcription f ( 584) 190 54.2 7.5e-07
XP_011534975 (OMIM: 604902,616202) PREDICTED: tran ( 627) 170 49.4 2.2e-05
NP_060780 (OMIM: 607013) transcription factor IIIB ( 419) 153 45.2 0.00028
NP_001229719 (OMIM: 604902,616202) transcription f ( 208) 148 43.8 0.00036
>>NP_001505 (OMIM: 189963) transcription initiation fact (316 aa)
initn: 2081 init1: 2081 opt: 2081 Z-score: 2707.9 bits: 509.2 E(85289): 4.3e-144
Smith-Waterman score: 2081; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KB8 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
250 260 270 280 290 300
310
pF1KB8 PTDFKFDTPVDKLPQL
::::::::::::::::
NP_001 PTDFKFDTPVDKLPQL
310
>>XP_011539601 (OMIM: 189963) PREDICTED: transcription i (285 aa)
initn: 1869 init1: 1869 opt: 1869 Z-score: 2432.7 bits: 458.2 E(85289): 9.1e-129
Smith-Waterman score: 1869; 100.0% identity (100.0% similar) in 285 aa overlap (32-316:1-285)
10 20 30 40 50 60
pF1KB8 ASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKAT
::::::::::::::::::::::::::::::
XP_011 MICPECGLVVGDRVIDVGSEWRTFSNDKAT
10 20 30
70 80 90 100 110 120
pF1KB8 KDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEI
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 TTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEIC
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 AVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 LDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFP
220 230 240 250 260 270
310
pF1KB8 TDFKFDTPVDKLPQL
:::::::::::::::
XP_011 TDFKFDTPVDKLPQL
280
>>XP_011534974 (OMIM: 604902,616202) PREDICTED: transcri (632 aa)
initn: 259 init1: 141 opt: 246 Z-score: 316.3 bits: 67.7 E(85289): 7e-11
Smith-Waterman score: 261; 23.8% identity (55.4% similar) in 294 aa overlap (26-313:17-275)
10 20 30 40 50 60
pF1KB8 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
: :: .: :: :. : .:
XP_011 MTGRVCRGCGGTDIELDAARGDAVCTACGSVLEDNII--------------
10 20 30
70 80 90 100 110
pF1KB8 TKDPSRVGDSQNPLLSDGDLSTMIGKGT---GAASFDEFGNSKYQNRRTMSSSDRAMMNA
:.. : . :.: :. .:. . ::.. .:.. . : : . ....:.
XP_011 ------VSEVQF-VESSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRA-QTLQNG
40 50 60 70 80
120 130 140 150 160 170
pF1KB8 FKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTF
..: ......: .. .: . :.::.. .. .:: . .::::..:: ::.:. .
XP_011 RRHIHHLGNQLQLNQHCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHML
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB8 KEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQ---VQMAATH
.. . ... .:. : :. . : .. : .. :: : . .. :.:.: .
XP_011 LDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALR
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB8 IARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYP
. .. . . :: : .. .::. .:.. .:: ::. ... : . :.:. ::
XP_011 LLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRK--RL---
210 220 230 240 250 260
300 310
pF1KB8 RAPDLFPTDFKFDTPVDKLPQL
:.:. :::...:
XP_011 -------TEFE-DTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEE
270 280 290 300 310
>>XP_005267618 (OMIM: 604902,616202) PREDICTED: transcri (676 aa)
initn: 259 init1: 141 opt: 246 Z-score: 315.9 bits: 67.7 E(85289): 7.4e-11
Smith-Waterman score: 261; 23.8% identity (55.4% similar) in 294 aa overlap (26-313:17-275)
10 20 30 40 50 60
pF1KB8 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
: :: .: :: :. : .:
XP_005 MTGRVCRGCGGTDIELDAARGDAVCTACGSVLEDNII--------------
10 20 30
70 80 90 100 110
pF1KB8 TKDPSRVGDSQNPLLSDGDLSTMIGKGT---GAASFDEFGNSKYQNRRTMSSSDRAMMNA
:.. : . :.: :. .:. . ::.. .:.. . : : . ....:.
XP_005 ------VSEVQF-VESSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRA-QTLQNG
40 50 60 70 80
120 130 140 150 160 170
pF1KB8 FKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTF
..: ......: .. .: . :.::.. .. .:: . .::::..:: ::.:. .
XP_005 RRHIHHLGNQLQLNQHCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHML
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB8 KEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQ---VQMAATH
.. . ... .:. : :. . : .. : .. :: : . .. :.:.: .
XP_005 LDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALR
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB8 IARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYP
. .. . . :: : .. .::. .:.. .:: ::. ... : . :.:. ::
XP_005 LLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRK--RL---
210 220 230 240 250 260
300 310
pF1KB8 RAPDLFPTDFKFDTPVDKLPQL
:.:. :::...:
XP_005 -------TEFE-DTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEE
270 280 290 300 310
>>NP_001510 (OMIM: 604902,616202) transcription factor I (677 aa)
initn: 259 init1: 141 opt: 246 Z-score: 315.9 bits: 67.7 E(85289): 7.4e-11
Smith-Waterman score: 261; 23.8% identity (55.4% similar) in 294 aa overlap (26-313:17-275)
10 20 30 40 50 60
pF1KB8 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
: :: .: :: :. : .:
NP_001 MTGRVCRGCGGTDIELDAARGDAVCTACGSVLEDNII--------------
10 20 30
70 80 90 100 110
pF1KB8 TKDPSRVGDSQNPLLSDGDLSTMIGKGT---GAASFDEFGNSKYQNRRTMSSSDRAMMNA
:.. : . :.: :. .:. . ::.. .:.. . : : . ....:.
NP_001 ------VSEVQF-VESSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRA-QTLQNG
40 50 60 70 80
120 130 140 150 160 170
pF1KB8 FKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTF
..: ......: .. .: . :.::.. .. .:: . .::::..:: ::.:. .
NP_001 RRHIHHLGNQLQLNQHCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHML
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB8 KEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQ---VQMAATH
.. . ... .:. : :. . : .. : .. :: : . .. :.:.: .
NP_001 LDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALR
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB8 IARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYP
. .. . . :: : .. .::. .:.. .:: ::. ... : . :.:. ::
NP_001 LLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRK--RL---
210 220 230 240 250 260
300 310
pF1KB8 RAPDLFPTDFKFDTPVDKLPQL
:.:. :::...:
NP_001 -------TEFE-DTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEE
270 280 290 300 310
>>NP_001229717 (OMIM: 604902,616202) transcription facto (650 aa)
initn: 259 init1: 141 opt: 228 Z-score: 292.7 bits: 63.4 E(85289): 1.5e-09
Smith-Waterman score: 230; 24.3% identity (60.4% similar) in 202 aa overlap (115-313:60-248)
90 100 110 120 130 140
pF1KB8 GKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQ
... ..: ......: .. .: . :.::.
NP_001 SVLEDNIIVSEVQFVESSGGGSSAVGQFVSLDGRRHIHHLGNQLQLNQHCLDTAFNFFKM
30 40 50 60 70 80
150 160 170 180 190 200
pF1KB8 VYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALET
. .. .:: . .::::..:: ::.:. . .. . ... .:. : :. . :
NP_001 AVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCI
90 100 110 120 130 140
210 220 230 240 250 260
pF1KB8 SVDLITTGDFMSRFCSNLCLPKQ---VQMAATHIARKAVELDLVPGRSPISVAAAAIYMA
.. : .. :: : . .. :.:.: .. .. . . :: : .. .::. .:
NP_001 NAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVA
150 160 170 180 190 200
270 280 290 300 310
pF1KB8 SQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDFKFDTPVDKLPQL
.. .:: ::. ... : . :.:. :: :.:. :::...:
NP_001 ARMHDFRRTVKEVISVVKVCESTLRK--RL----------TEFE-DTPTSQLTIDEFMKI
210 220 230 240 250
NP_001 DLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIELENSRPKAKGGL
260 270 280 290 300 310
>>NP_001229716 (OMIM: 604902,616202) transcription facto (562 aa)
initn: 189 init1: 124 opt: 190 Z-score: 244.2 bits: 54.2 E(85289): 7.3e-07
Smith-Waterman score: 192; 26.1% identity (58.2% similar) in 165 aa overlap (152-313:9-160)
130 140 150 160 170 180
pF1KB8 TTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEIC
.:: . .::::..:: ::.:. . ..
NP_001 MAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLS
10 20 30
190 200 210 220 230
pF1KB8 AVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQ---VQMAATHIARK
. ... .:. : :. . : .. : .. :: : . .. :.:.: .. ..
NP_001 DLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQR
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB8 AVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPD
. . :: : .. .::. .:.. .:: ::. ... : . :.:. ::
NP_001 MKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRK--RL-------
100 110 120 130 140
300 310
pF1KB8 LFPTDFKFDTPVDKLPQL
:.:. :::...:
NP_001 ---TEFE-DTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGE
150 160 170 180 190 200
>>NP_001229715 (OMIM: 604902,616202) transcription facto (584 aa)
initn: 189 init1: 124 opt: 190 Z-score: 243.9 bits: 54.2 E(85289): 7.5e-07
Smith-Waterman score: 192; 26.1% identity (58.2% similar) in 165 aa overlap (152-313:9-160)
130 140 150 160 170 180
pF1KB8 TTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEIC
.:: . .::::..:: ::.:. . ..
NP_001 MAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLS
10 20 30
190 200 210 220 230
pF1KB8 AVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQ---VQMAATHIARK
. ... .:. : :. . : .. : .. :: : . .. :.:.: .. ..
NP_001 DLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQR
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB8 AVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPD
. . :: : .. .::. .:.. .:: ::. ... : . :.:. ::
NP_001 MKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRK--RL-------
100 110 120 130 140
300 310
pF1KB8 LFPTDFKFDTPVDKLPQL
:.:. :::...:
NP_001 ---TEFE-DTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGE
150 160 170 180 190 200
>>XP_011534975 (OMIM: 604902,616202) PREDICTED: transcri (627 aa)
initn: 154 init1: 101 opt: 170 Z-score: 217.5 bits: 49.4 E(85289): 2.2e-05
Smith-Waterman score: 183; 23.3% identity (55.6% similar) in 180 aa overlap (26-202:17-174)
10 20 30 40 50 60
pF1KB8 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
: :: .: :: :. : .:
XP_011 MTGRVCRGCGGTDIELDAARGDAVCTACGSVLEDNII--------------
10 20 30
70 80 90 100 110
pF1KB8 TKDPSRVGDSQNPLLSDGDLSTMIGKGT---GAASFDEFGNSKYQNRRTMSSSDRAMMNA
:.. : . :.: :. .:. . ::.. .:.. . : : . ....:.
XP_011 ------VSEVQF-VESSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKESRA-QTLQNG
40 50 60 70 80
120 130 140 150 160 170
pF1KB8 FKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTF
..: ......: .. .: . :.::.. .. .:: . .::::..:: ::.:. .
XP_011 RRHIHHLGNQLQLNQHCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHML
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB8 KEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIAR
.. . ... .:. : :. . :
XP_011 LDLSDLLQVNVYVLGKTFLLLARELCINAPAIALLVAARMHDFRRTVKEVISVVKVCEST
150 160 170 180 190 200
>>NP_060780 (OMIM: 607013) transcription factor IIIB 50 (419 aa)
initn: 202 init1: 79 opt: 153 Z-score: 197.9 bits: 45.2 E(85289): 0.00028
Smith-Waterman score: 190; 22.5% identity (52.7% similar) in 275 aa overlap (10-264:1-236)
10 20 30 40 50
pF1KB8 MASTSRLDALP-RVTCPNHPDAILVED--YRAGDMICPECGLVVGDRVIDVGSEWRTFSN
.: : ::. .. :::: : ....: .:: :: . :. . :::.
NP_060 MPGRGRCPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTT-----TFSD
10 20 30 40
60 70 80 90 100 110
pF1KB8 DKATKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNA
. :.: . .. : .:... :..:..
NP_060 E-------------------GNLREVT-----------YSRSTGENEQVSRSQQRGL---
50 60 70
120 130 140 150 160 170
pF1KB8 FKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKG---RANDAIASACLYIACRQEGVP
... . ..:: .. : . ..:.:....... . ...... :. :.:::.. :
NP_060 -RRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITCRQHNWP
80 90 100 110 120 130
180 190 200 210 220
pF1KB8 RTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCL----P----K
:. ::.. . .. . :.: : .: . ..... .::.. : : :
NP_060 LTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKTYCSSFKLFQASPSVPAK
140 150 160 170 180 190
230 240 250 260 270 280
pF1KB8 QVQMAATHIAR--KAVELD----LVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGV
:. ..: . ::: :: :: :. : .:: ..: :.
NP_060 YVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAWQSLQPADRLSCSLARFCK
200 210 220 230 240 250
290 300 310
pF1KB8 ADVTIRQSYRLIYPRAPDLFPTDFKFDTPVDKLPQL
NP_060 LANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGDLLQHRQSLVRSAF
260 270 280 290 300 310
316 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:53:02 2016 done: Sat Nov 5 20:53:03 2016
Total Scan time: 7.200 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]