FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8183, 204 aa 1>>>pF1KB8183 204 - 204 aa - 204 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3395+/-0.000276; mu= 9.6257+/- 0.017 mean_var=98.7592+/-19.716, 0's: 0 Z-trim(120.8): 1 B-trim: 1262 in 1/55 Lambda= 0.129058 statistics sampled from 36630 (36631) to 36630 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.429), width: 16 Scan time: 5.650 The best scores are: opt bits E(85289) NP_060740 (OMIM: 611157) MRG/MORF4L-binding protei ( 204) 1369 264.2 1e-70 >>NP_060740 (OMIM: 611157) MRG/MORF4L-binding protein [H (204 aa) initn: 1369 init1: 1369 opt: 1369 Z-score: 1390.6 bits: 264.2 E(85289): 1e-70 Smith-Waterman score: 1369; 100.0% identity (100.0% similar) in 204 aa overlap (1-204:1-204) 10 20 30 40 50 60 pF1KB8 MGEAEVGGGGAAGDKGPGEAATSPAEETVVWSPEVEVCLFHAMLGHKPVGVNRHFHMICI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MGEAEVGGGGAAGDKGPGEAATSPAEETVVWSPEVEVCLFHAMLGHKPVGVNRHFHMICI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 RDKFSQNIGRQVPSKVIWDHLSTMYDMQALHESEILPFPNPERNFVLPEEIIQEVREGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 RDKFSQNIGRQVPSKVIWDHLSTMYDMQALHESEILPFPNPERNFVLPEEIIQEVREGKV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 MIEEEMKEEMKEDVDPHNGADDVFSSSGSLGKASEKSSKDKEKNSSDLGCKEGADKRKRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MIEEEMKEEMKEDVDPHNGADDVFSSSGSLGKASEKSSKDKEKNSSDLGCKEGADKRKRS 130 140 150 160 170 180 190 200 pF1KB8 RVTDKVLTANSNPSSPSAAKRRRT :::::::::::::::::::::::: NP_060 RVTDKVLTANSNPSSPSAAKRRRT 190 200 204 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 10:18:22 2016 done: Fri Nov 4 10:18:23 2016 Total Scan time: 5.650 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]