Result of FASTA (omim) for
pF1KB8174
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8174, 563 aa
1>>>pF1KB8174 563 - 563 aa - 563 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.3342+/-0.000417; mu= 0.0237+/- 0.026
mean_var=201.6644+/-41.821, 0's: 0 Z-trim(117.4): 61 B-trim: 0 in 0/59
Lambda= 0.090315
statistics sampled from 29235 (29296) to 29235 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.343), width: 16
Scan time: 9.350
The best scores are: opt bits E(85289)
NP_077808 (OMIM: 604409) glucocorticoid modulatory ( 563) 3613 483.7 6.6e-136
XP_011538823 (OMIM: 604409) PREDICTED: glucocortic ( 563) 3613 483.7 6.6e-136
NP_001306603 (OMIM: 604409) glucocorticoid modulat ( 563) 3613 483.7 6.6e-136
XP_016855576 (OMIM: 604409) PREDICTED: glucocortic ( 573) 3336 447.6 4.9e-125
XP_011538820 (OMIM: 604409) PREDICTED: glucocortic ( 573) 3336 447.6 4.9e-125
NP_006573 (OMIM: 604409) glucocorticoid modulatory ( 573) 3336 447.6 4.9e-125
XP_011538821 (OMIM: 604409) PREDICTED: glucocortic ( 573) 3336 447.6 4.9e-125
XP_011538824 (OMIM: 604409) PREDICTED: glucocortic ( 367) 2296 312.0 2.1e-84
XP_005260259 (OMIM: 607451) PREDICTED: glucocortic ( 530) 695 103.5 1.8e-21
NP_036516 (OMIM: 607451) glucocorticoid modulatory ( 530) 695 103.5 1.8e-21
XP_006723839 (OMIM: 607451) PREDICTED: glucocortic ( 452) 633 95.4 4.2e-19
XP_011527081 (OMIM: 607451) PREDICTED: glucocortic ( 452) 633 95.4 4.2e-19
>>NP_077808 (OMIM: 604409) glucocorticoid modulatory ele (563 aa)
initn: 3613 init1: 3613 opt: 3613 Z-score: 2560.9 bits: 483.7 E(85289): 6.6e-136
Smith-Waterman score: 3613; 100.0% identity (100.0% similar) in 563 aa overlap (1-563:1-563)
10 20 30 40 50 60
pF1KB8 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGIYEAGSENNTAVVAVET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGIYEAGSENNTAVVAVET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 HTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 KHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 RAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 EISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDAAVLNNVAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 EISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDAAVLNNVAHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 FGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQTVQNVVLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 FGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQTVQNVVLMP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 VSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMGNIPVATLSQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 VSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMGNIPVATLSQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 SSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 MVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 MVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEE
490 500 510 520 530 540
550 560
pF1KB8 KVVAEMEEHQHQVHNVEIVVLED
:::::::::::::::::::::::
NP_077 KVVAEMEEHQHQVHNVEIVVLED
550 560
>>XP_011538823 (OMIM: 604409) PREDICTED: glucocorticoid (563 aa)
initn: 3613 init1: 3613 opt: 3613 Z-score: 2560.9 bits: 483.7 E(85289): 6.6e-136
Smith-Waterman score: 3613; 100.0% identity (100.0% similar) in 563 aa overlap (1-563:1-563)
10 20 30 40 50 60
pF1KB8 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGIYEAGSENNTAVVAVET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGIYEAGSENNTAVVAVET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 EISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDAAVLNNVAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDAAVLNNVAHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 FGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQTVQNVVLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQTVQNVVLMP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 VSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMGNIPVATLSQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMGNIPVATLSQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 MVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEE
490 500 510 520 530 540
550 560
pF1KB8 KVVAEMEEHQHQVHNVEIVVLED
:::::::::::::::::::::::
XP_011 KVVAEMEEHQHQVHNVEIVVLED
550 560
>>NP_001306603 (OMIM: 604409) glucocorticoid modulatory (563 aa)
initn: 3613 init1: 3613 opt: 3613 Z-score: 2560.9 bits: 483.7 E(85289): 6.6e-136
Smith-Waterman score: 3613; 100.0% identity (100.0% similar) in 563 aa overlap (1-563:1-563)
10 20 30 40 50 60
pF1KB8 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGIYEAGSENNTAVVAVET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGIYEAGSENNTAVVAVET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 EISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDAAVLNNVAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDAAVLNNVAHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 FGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQTVQNVVLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQTVQNVVLMP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 VSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMGNIPVATLSQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMGNIPVATLSQG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 MVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEE
490 500 510 520 530 540
550 560
pF1KB8 KVVAEMEEHQHQVHNVEIVVLED
:::::::::::::::::::::::
NP_001 KVVAEMEEHQHQVHNVEIVVLED
550 560
>>XP_016855576 (OMIM: 604409) PREDICTED: glucocorticoid (573 aa)
initn: 3336 init1: 3336 opt: 3336 Z-score: 2365.7 bits: 447.6 E(85289): 4.9e-125
Smith-Waterman score: 3583; 98.3% identity (98.3% similar) in 573 aa overlap (1-563:1-573)
10 20 30 40 50
pF1KB8 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQG----------IYEAGSE
::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGLFIDGHFYNRIYEAGSE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB8 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
490 500 510 520 530 540
540 550 560
pF1KB8 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
:::::::::::::::::::::::::::::::::
XP_016 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
550 560 570
>>XP_011538820 (OMIM: 604409) PREDICTED: glucocorticoid (573 aa)
initn: 3336 init1: 3336 opt: 3336 Z-score: 2365.7 bits: 447.6 E(85289): 4.9e-125
Smith-Waterman score: 3583; 98.3% identity (98.3% similar) in 573 aa overlap (1-563:1-573)
10 20 30 40 50
pF1KB8 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQG----------IYEAGSE
::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_011 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGLFIDGHFYNRIYEAGSE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB8 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
490 500 510 520 530 540
540 550 560
pF1KB8 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
:::::::::::::::::::::::::::::::::
XP_011 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
550 560 570
>>NP_006573 (OMIM: 604409) glucocorticoid modulatory ele (573 aa)
initn: 3336 init1: 3336 opt: 3336 Z-score: 2365.7 bits: 447.6 E(85289): 4.9e-125
Smith-Waterman score: 3583; 98.3% identity (98.3% similar) in 573 aa overlap (1-563:1-573)
10 20 30 40 50
pF1KB8 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQG----------IYEAGSE
::::::::::::::::::::::::::::::::::::::::::: :::::::
NP_006 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGLFIDGHFYNRIYEAGSE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB8 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
490 500 510 520 530 540
540 550 560
pF1KB8 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
:::::::::::::::::::::::::::::::::
NP_006 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
550 560 570
>>XP_011538821 (OMIM: 604409) PREDICTED: glucocorticoid (573 aa)
initn: 3336 init1: 3336 opt: 3336 Z-score: 2365.7 bits: 447.6 E(85289): 4.9e-125
Smith-Waterman score: 3583; 98.3% identity (98.3% similar) in 573 aa overlap (1-563:1-573)
10 20 30 40 50
pF1KB8 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQG----------IYEAGSE
::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_011 MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGLFIDGHFYNRIYEAGSE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NNTAVVAVETHTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTD
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB8 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAV
490 500 510 520 530 540
540 550 560
pF1KB8 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
:::::::::::::::::::::::::::::::::
XP_011 ILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
550 560 570
>>XP_011538824 (OMIM: 604409) PREDICTED: glucocorticoid (367 aa)
initn: 2296 init1: 2296 opt: 2296 Z-score: 1636.3 bits: 312.0 E(85289): 2.1e-84
Smith-Waterman score: 2296; 100.0% identity (100.0% similar) in 364 aa overlap (200-563:4-367)
170 180 190 200 210 220
pF1KB8 STKFDLLISSARAPVPGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTM
::::::::::::::::::::::::::::::
XP_011 MVGGSITQIAISEESMEEAGLEWNSALTAAVTM
10 20 30
230 240 250 260 270 280
pF1KB8 ATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVT
40 50 60 70 80 90
290 300 310 320 330 340
pF1KB8 DAAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DAAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLK
100 110 120 130 140 150
350 360 370 380 390 400
pF1KB8 SQTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSM
160 170 180 190 200 210
410 420 430 440 450 460
pF1KB8 GNIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAM
220 230 240 250 260 270
470 480 490 500 510 520
pF1KB8 QDGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKA
280 290 300 310 320 330
530 540 550 560
pF1KB8 VILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
::::::::::::::::::::::::::::::::::
XP_011 VILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
340 350 360
>>XP_005260259 (OMIM: 607451) PREDICTED: glucocorticoid (530 aa)
initn: 1232 init1: 602 opt: 695 Z-score: 506.5 bits: 103.5 E(85289): 1.8e-21
Smith-Waterman score: 1254; 41.2% identity (70.5% similar) in 539 aa overlap (1-521:1-512)
10 20 30 40 50
pF1KB8 MANAEVSVPVGDVVVV--PTEGNEGENPEDTKTQVIL-QLQPVQQGIYEAG--SENNTAV
::. .::: . .:::: : . .: . : .:: .. .: : . : . .:: .:.
XP_005 MATPDVSVHMEEVVVVTTPDTAVDGSGVEGVKTVLVTTNLAPHGGDLTEDNMETENAAAA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VAVETHTIHKIEEGIDTGTIEANEDME--IAYPITCGESKAILLWKKFVCPGINVKCVKF
.:. . ...:.. . : .:..: :.::::::.:.: :.:.::::::::::::..
XP_005 AAAAFTASSQLKEAVLVKMAEEGENLEAEIVYPITCGDSRANLIWRKFVCPGINVKCVQY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 NDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKF
....::::.::::::::::::::::::..::::::.::::..:::::::::::::::::.
XP_005 DEHVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSGELDFYQHDKVCSNTCRSTKI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 DLLISSARAPV--PGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMAT
:: :.::. . : . . ::..:: . . .:. :. :. : .:..:
XP_005 DL--SGARVSLSSPTSAEYIPLTPAAADVNGSPATITIETCEDPG-DWTAA---------
190 200 210 220
240 250 260 270 280 290
pF1KB8 EEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDA
:..::. ::.:. :.::..::. ....:. : .::.:::. . :.:. ::
XP_005 ----------IGDDTFTFWRGLKDAGLLDEVIQEFHQELVETMRGLQQRVQDPPLQLRDA
230 240 250 260 270
300 310 320 330 340 350
pF1KB8 AVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQ
..:::....::..: ::::: ... :.....::. :. ::.: .:....... . :::
XP_005 VLLNNIVQNFGMLDLVKKVLASHKCQMDRSREQYARDLAALEQQCDEHRRRAKELKHKSQ
280 290 300 310 320 330
360 370 380 390 400
pF1KB8 TVQNVV--LMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSM
..::. : ::: : : ::::: : .: . : . : ...: . .: : .
XP_005 HLSNVLMTLTPVSLPPPVKRPRLARATSGPAAMASQVLTQSAQLALGPGVPVPQLTSVPL
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB8 GNI----PVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHP-SSSLALL
:.. : ..:..:: . . :..: : : ::..:. :. :.:: ::: .:::..:
XP_005 GKVVSTLPSTVLGKGSLQAPPASSPASPLLGGY-TVLASSGSTYPSTVEIHPDASSLTVL
400 410 420 430 440 450
470 480 490 500 510 520
pF1KB8 SSTAMQDGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDP--APDPEA
:..:.:::::. .:::..:... :: ..: : ..: ..::. . :: ::
XP_005 STAAVQDGSTV---FKVVSPLQLLTLP-GLGPTLQNVAQASPGSSTIVTVPAGAAPGPEE
460 470 480 490 500 510
530 540 550 560
pF1KB8 EDTEGKAVILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
XP_005 HTATIEVAAMAEDHERK
520 530
>>NP_036516 (OMIM: 607451) glucocorticoid modulatory ele (530 aa)
initn: 1232 init1: 602 opt: 695 Z-score: 506.5 bits: 103.5 E(85289): 1.8e-21
Smith-Waterman score: 1254; 41.2% identity (70.5% similar) in 539 aa overlap (1-521:1-512)
10 20 30 40 50
pF1KB8 MANAEVSVPVGDVVVV--PTEGNEGENPEDTKTQVIL-QLQPVQQGIYEAG--SENNTAV
::. .::: . .:::: : . .: . : .:: .. .: : . : . .:: .:.
NP_036 MATPDVSVHMEEVVVVTTPDTAVDGSGVEGVKTVLVTTNLAPHGGDLTEDNMETENAAAA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VAVETHTIHKIEEGIDTGTIEANEDME--IAYPITCGESKAILLWKKFVCPGINVKCVKF
.:. . ...:.. . : .:..: :.::::::.:.: :.:.::::::::::::..
NP_036 AAAAFTASSQLKEAVLVKMAEEGENLEAEIVYPITCGDSRANLIWRKFVCPGINVKCVQY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 NDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKF
....::::.::::::::::::::::::..::::::.::::..:::::::::::::::::.
NP_036 DEHVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSGELDFYQHDKVCSNTCRSTKI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 DLLISSARAPV--PGQQTSVVQTPTSADGSITQIAISEESMEEAGLEWNSALTAAVTMAT
:: :.::. . : . . ::..:: . . .:. :. :. : .:..:
NP_036 DL--SGARVSLSSPTSAEYIPLTPAAADVNGSPATITIETCEDPG-DWTAA---------
190 200 210 220
240 250 260 270 280 290
pF1KB8 EEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEELLRGVQQRLIQAPFQVTDA
:..::. ::.:. :.::..::. ....:. : .::.:::. . :.:. ::
NP_036 ----------IGDDTFTFWRGLKDAGLLDEVIQEFHQELVETMRGLQQRVQDPPLQLRDA
230 240 250 260 270
300 310 320 330 340 350
pF1KB8 AVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQKKQGQDHRLKSQ
..:::....::..: ::::: ... :.....::. :. ::.: .:....... . :::
NP_036 VLLNNIVQNFGMLDLVKKVLASHKCQMDRSREQYARDLAALEQQCDEHRRRAKELKHKSQ
280 290 300 310 320 330
360 370 380 390 400
pF1KB8 TVQNVV--LMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSM
..::. : ::: : : ::::: : .: . : . : ...: . .: : .
NP_036 HLSNVLMTLTPVSLPPPVKRPRLARATSGPAAMASQVLTQSAQLALGPGVPVPQLTSVPL
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB8 GNI----PVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHP-SSSLALL
:.. : ..:..:: . . :..: : : ::..:. :. :.:: ::: .:::..:
NP_036 GKVVSTLPSTVLGKGSLQAPPASSPASPLLGGY-TVLASSGSTYPSTVEIHPDASSLTVL
400 410 420 430 440 450
470 480 490 500 510 520
pF1KB8 SSTAMQDGSTLGNMTTMVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDP--APDPEA
:..:.:::::. .:::..:... :: ..: : ..: ..::. . :: ::
NP_036 STAAVQDGSTV---FKVVSPLQLLTLP-GLGPTLQNVAQASPGSSTIVTVPAGAAPGPEE
460 470 480 490 500 510
530 540 550 560
pF1KB8 EDTEGKAVILETELRTEEKVVAEMEEHQHQVHNVEIVVLED
NP_036 HTATIEVAAMAEDHERK
520 530
563 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:15:14 2016 done: Fri Nov 4 10:15:15 2016
Total Scan time: 9.350 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]