Result of FASTA (omim) for
pF1KB8166
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8166, 644 aa
1>>>pF1KB8166 644 - 644 aa - 644 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1230+/-0.00034; mu= 15.8669+/- 0.021
mean_var=98.8414+/-20.146, 0's: 0 Z-trim(117.1): 16 B-trim: 361 in 2/49
Lambda= 0.129004
statistics sampled from 28873 (28881) to 28873 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.339), width: 16
Scan time: 9.710
The best scores are: opt bits E(85289)
NP_009196 (OMIM: 616464) protein ecdysoneless homo ( 644) 4315 813.8 0
NP_001129224 (OMIM: 616464) protein ecdysoneless h ( 677) 2579 490.7 7e-138
NP_001129225 (OMIM: 616464) protein ecdysoneless h ( 601) 2253 430.0 1.2e-119
>>NP_009196 (OMIM: 616464) protein ecdysoneless homolog (644 aa)
initn: 4315 init1: 4315 opt: 4315 Z-score: 4342.9 bits: 813.8 E(85289): 0
Smith-Waterman score: 4315; 100.0% identity (100.0% similar) in 644 aa overlap (1-644:1-644)
10 20 30 40 50 60
pF1KB8 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
550 560 570 580 590 600
610 620 630 640
pF1KB8 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
::::::::::::::::::::::::::::::::::::::::::::
NP_009 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
610 620 630 640
>>NP_001129224 (OMIM: 616464) protein ecdysoneless homol (677 aa)
initn: 2558 init1: 2558 opt: 2579 Z-score: 2596.4 bits: 490.7 E(85289): 7e-138
Smith-Waterman score: 4239; 95.1% identity (95.1% similar) in 677 aa overlap (1-644:1-677)
10 20 30 40 50 60
pF1KB8 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
310 320 330 340 350 360
370 380
pF1KB8 EMAENYFQLSVDWPE---------------------------------SSLAMSPGEEIL
::::::::::::::: ::::::::::::
NP_001 EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB8 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
430 440 450 460 470 480
450 460 470 480 490 500
pF1KB8 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB8 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
550 560 570 580 590 600
570 580 590 600 610 620
pF1KB8 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
610 620 630 640 650 660
630 640
pF1KB8 QLPDNTDHRPTSKPTKN
:::::::::::::::::
NP_001 QLPDNTDHRPTSKPTKN
670
>>NP_001129225 (OMIM: 616464) protein ecdysoneless homol (601 aa)
initn: 2253 init1: 2253 opt: 2253 Z-score: 2269.2 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 3916; 93.3% identity (93.3% similar) in 644 aa overlap (1-644:1-601)
10 20 30 40 50 60
pF1KB8 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
:::::::::::::::::::::
NP_001 IDLRACRVFKTFLPETRIMTS---------------------------------------
250 260
310 320 330 340 350 360
pF1KB8 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----AHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
270 280 290 300 310
370 380 390 400 410 420
pF1KB8 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB8 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB8 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
440 450 460 470 480 490
550 560 570 580 590 600
pF1KB8 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
500 510 520 530 540 550
610 620 630 640
pF1KB8 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
560 570 580 590 600
644 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:10:27 2016 done: Fri Nov 4 10:10:28 2016
Total Scan time: 9.710 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]