Result of FASTA (ccds) for
pF1KB8166
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8166, 644 aa
1>>>pF1KB8166 644 - 644 aa - 644 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0772+/-0.000807; mu= 16.2799+/- 0.049
mean_var=93.2025+/-18.733, 0's: 0 Z-trim(109.5): 18 B-trim: 10 in 1/50
Lambda= 0.132850
statistics sampled from 10955 (10964) to 10955 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.337), width: 16
Scan time: 3.950
The best scores are: opt bits E(32554)
CCDS7321.1 ECD gene_id:11319|Hs108|chr10 ( 644) 4315 837.4 0
CCDS44434.1 ECD gene_id:11319|Hs108|chr10 ( 677) 2579 504.7 1.6e-142
CCDS44433.1 ECD gene_id:11319|Hs108|chr10 ( 601) 2253 442.2 9.6e-124
>>CCDS7321.1 ECD gene_id:11319|Hs108|chr10 (644 aa)
initn: 4315 init1: 4315 opt: 4315 Z-score: 4470.5 bits: 837.4 E(32554): 0
Smith-Waterman score: 4315; 100.0% identity (100.0% similar) in 644 aa overlap (1-644:1-644)
10 20 30 40 50 60
pF1KB8 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
550 560 570 580 590 600
610 620 630 640
pF1KB8 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
610 620 630 640
>>CCDS44434.1 ECD gene_id:11319|Hs108|chr10 (677 aa)
initn: 2558 init1: 2558 opt: 2579 Z-score: 2672.0 bits: 504.7 E(32554): 1.6e-142
Smith-Waterman score: 4239; 95.1% identity (95.1% similar) in 677 aa overlap (1-644:1-677)
10 20 30 40 50 60
pF1KB8 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
310 320 330 340 350 360
370 380
pF1KB8 EMAENYFQLSVDWPE---------------------------------SSLAMSPGEEIL
::::::::::::::: ::::::::::::
CCDS44 EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB8 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
430 440 450 460 470 480
450 460 470 480 490 500
pF1KB8 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB8 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
550 560 570 580 590 600
570 580 590 600 610 620
pF1KB8 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
610 620 630 640 650 660
630 640
pF1KB8 QLPDNTDHRPTSKPTKN
:::::::::::::::::
CCDS44 QLPDNTDHRPTSKPTKN
670
>>CCDS44433.1 ECD gene_id:11319|Hs108|chr10 (601 aa)
initn: 2253 init1: 2253 opt: 2253 Z-score: 2335.1 bits: 442.2 E(32554): 9.6e-124
Smith-Waterman score: 3916; 93.3% identity (93.3% similar) in 644 aa overlap (1-644:1-601)
10 20 30 40 50 60
pF1KB8 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
:::::::::::::::::::::
CCDS44 IDLRACRVFKTFLPETRIMTS---------------------------------------
250 260
310 320 330 340 350 360
pF1KB8 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ----AHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
270 280 290 300 310
370 380 390 400 410 420
pF1KB8 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EMAENYFQLSVDWPESSLAMSPGEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSP
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB8 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAELPREPSEAP
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB8 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLD
440 450 460 470 480 490
550 560 570 580 590 600
pF1KB8 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NLKSYMAQMDQELAHTCISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNL
500 510 520 530 540 550
610 620 630 640
pF1KB8 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VSNILESYSSQAGLAGPASNLLQSMGVQLPDNTDHRPTSKPTKN
560 570 580 590 600
644 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:10:26 2016 done: Fri Nov 4 10:10:26 2016
Total Scan time: 3.950 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]