Result of FASTA (omim) for
pF1KB8157
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8157, 549 aa
1>>>pF1KB8157 549 - 549 aa - 549 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5576+/-0.000369; mu= 9.5710+/- 0.023
mean_var=158.3435+/-30.904, 0's: 0 Z-trim(118.3): 21 B-trim: 1400 in 1/54
Lambda= 0.101923
statistics sampled from 31109 (31130) to 31109 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.714), E-opt: 0.2 (0.365), width: 16
Scan time: 10.890
The best scores are: opt bits E(85289)
NP_055181 (OMIM: 608011) guanine nucleotide-bindin ( 549) 3571 537.2 5.1e-152
NP_996561 (OMIM: 608011) guanine nucleotide-bindin ( 537) 3495 526.0 1.2e-148
NP_996562 (OMIM: 608011) guanine nucleotide-bindin ( 537) 3495 526.0 1.2e-148
NP_061940 (OMIM: 300873) guanine nucleotide-bindin ( 582) 970 154.7 7.2e-37
NP_001171748 (OMIM: 300873) guanine nucleotide-bin ( 582) 970 154.7 7.2e-37
NP_001310553 (OMIM: 609365) nucleolar GTP-binding ( 548) 356 64.4 1e-09
NP_037417 (OMIM: 609365) nucleolar GTP-binding pro ( 731) 356 64.5 1.3e-09
NP_001310552 (OMIM: 609365) nucleolar GTP-binding ( 799) 340 62.2 7.1e-09
>>NP_055181 (OMIM: 608011) guanine nucleotide-binding pr (549 aa)
initn: 3571 init1: 3571 opt: 3571 Z-score: 2850.2 bits: 537.2 E(85289): 5.1e-152
Smith-Waterman score: 3571; 99.5% identity (100.0% similar) in 549 aa overlap (1-549:1-549)
10 20 30 40 50 60
pF1KB8 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
NP_055 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 SLEFFTMLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGQQSTRSFILDKIIEEDD
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_055 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDD
490 500 510 520 530 540
pF1KB8 AYDFSTDYV
:::::::::
NP_055 AYDFSTDYV
>>NP_996561 (OMIM: 608011) guanine nucleotide-binding pr (537 aa)
initn: 3495 init1: 3495 opt: 3495 Z-score: 2790.0 bits: 526.0 E(85289): 1.2e-148
Smith-Waterman score: 3495; 99.4% identity (100.0% similar) in 537 aa overlap (13-549:1-537)
10 20 30 40 50 60
pF1KB8 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL
::::::::::::::::::::::::::.:::::::::::::::::::::
NP_996 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL
10 20 30 40
70 80 90 100 110 120
pF1KB8 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB8 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB8 SLEFFTMLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 SLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB8 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB8 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGQQSTRSFILDKIIEEDD
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_996 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDD
470 480 490 500 510 520
pF1KB8 AYDFSTDYV
:::::::::
NP_996 AYDFSTDYV
530
>>NP_996562 (OMIM: 608011) guanine nucleotide-binding pr (537 aa)
initn: 3495 init1: 3495 opt: 3495 Z-score: 2790.0 bits: 526.0 E(85289): 1.2e-148
Smith-Waterman score: 3495; 99.4% identity (100.0% similar) in 537 aa overlap (13-549:1-537)
10 20 30 40 50 60
pF1KB8 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL
::::::::::::::::::::::::::.:::::::::::::::::::::
NP_996 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL
10 20 30 40
70 80 90 100 110 120
pF1KB8 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB8 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB8 SLEFFTMLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 SLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB8 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB8 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGQQSTRSFILDKIIEEDD
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_996 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDD
470 480 490 500 510 520
pF1KB8 AYDFSTDYV
:::::::::
NP_996 AYDFSTDYV
530
>>NP_061940 (OMIM: 300873) guanine nucleotide-binding pr (582 aa)
initn: 887 init1: 384 opt: 970 Z-score: 782.9 bits: 154.7 E(85289): 7.2e-37
Smith-Waterman score: 970; 37.5% identity (69.8% similar) in 437 aa overlap (16-443:6-441)
10 20 30 40 50
pF1KB8 MKRPKLKKASKRMTCHKRYKIQKKVREHHR---KLRKEAKKQGHKKPRKDPGVPNSAPFK
:: : . . :.. . ::..:.: : :..:. . .
NP_061 MMKLRHKNKKPGEGSKGHKKISWPYPQPAKQNGKKATSKVPSAPHFVHPN
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 EALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETN-PDIKPSNVEPMEKEFGLCKTE
. :::::.:. .::....:. :..: .:.: .:. :. . : .:: : . .
NP_061 DHANREAELKKKWVEEMREKQQAAREQERQKRRTIESYCQDVLRRQEEFEHKEEVLQELN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 NKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQS-GQKKLVL
. . ..: : .:..::.: :::.:::::::::::::: :.:::.... :.:::::
NP_061 MFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 ILNKSDLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPF-RSEVC
.::: :::::: .:.::.::..:::::.:.:::. . :. : . . . . .:..:
NP_061 VLNKIDLVPKEVVEKWLDYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKAC
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 FGKEGLWKLLGGFQET--CSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSM
:: :.: ..::.. . :::::.:.:::::::.:::::. . :.::. :.:. :
NP_061 FGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFM
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 QVVPLDKQITIIDSPSFIVSPLNSSSALALRSPASIE-VVKPMEAASAILSQADARQVVL
: : ::: : ..:.:... .: :: . ::. . .. .. :. . .::.. . ...
NP_061 QEVYLDKFIRLLDAPGIVPGP-NSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISN
300 310 320 330 340
360 370 380 390 400 410
pF1KB8 KYTVPGYRNSLEFFTMLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTP
: : :.... .:.: .:.: : ..:::. . : ::: . ..:.......: ::.. :
NP_061 YYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPPATHTL
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB8 PPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHE
: ... :: .: :..:. :. : .... .
NP_061 PTHLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPLEMEIKLLHSPMTK
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB8 ELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGQQSTRSFI
NP_061 IADAIENKTTVYKIGDLTGYCTNPNRHQMGWAKRNVDHRPKSNSMVDVCSVDRRSVLQRI
470 480 490 500 510 520
>>NP_001171748 (OMIM: 300873) guanine nucleotide-binding (582 aa)
initn: 887 init1: 384 opt: 970 Z-score: 782.9 bits: 154.7 E(85289): 7.2e-37
Smith-Waterman score: 970; 37.5% identity (69.8% similar) in 437 aa overlap (16-443:6-441)
10 20 30 40 50
pF1KB8 MKRPKLKKASKRMTCHKRYKIQKKVREHHR---KLRKEAKKQGHKKPRKDPGVPNSAPFK
:: : . . :.. . ::..:.: : :..:. . .
NP_001 MMKLRHKNKKPGEGSKGHKKISWPYPQPAKQNGKKATSKVPSAPHFVHPN
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 EALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETN-PDIKPSNVEPMEKEFGLCKTE
. :::::.:. .::....:. :..: .:.: .:. :. . : .:: : . .
NP_001 DHANREAELKKKWVEEMREKQQAAREQERQKRRTIESYCQDVLRRQEEFEHKEEVLQELN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 NKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQS-GQKKLVL
. . ..: : .:..::.: :::.:::::::::::::: :.:::.... :.:::::
NP_001 MFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 ILNKSDLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPF-RSEVC
.::: :::::: .:.::.::..:::::.:.:::. . :. : . . . . .:..:
NP_001 VLNKIDLVPKEVVEKWLDYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKAC
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 FGKEGLWKLLGGFQET--CSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSM
:: :.: ..::.. . :::::.:.:::::::.:::::. . :.::. :.:. :
NP_001 FGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFM
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 QVVPLDKQITIIDSPSFIVSPLNSSSALALRSPASIE-VVKPMEAASAILSQADARQVVL
: : ::: : ..:.:... .: :: . ::. . .. .. :. . .::.. . ...
NP_001 QEVYLDKFIRLLDAPGIVPGP-NSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISN
300 310 320 330 340
360 370 380 390 400 410
pF1KB8 KYTVPGYRNSLEFFTMLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTP
: : :.... .:.: .:.: : ..:::. . : ::: . ..:.......: ::.. :
NP_001 YYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPPATHTL
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB8 PPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHE
: ... :: .: :..:. :. : .... .
NP_001 PTHLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPLEMEIKLLHSPMTK
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB8 ELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGQQSTRSFI
NP_001 IADAIENKTTVYKIGDLTGYCTNPNRHQMGWAKRNVDHRPKSNSMVDVCSVDRRSVLQRI
470 480 490 500 510 520
>>NP_001310553 (OMIM: 609365) nucleolar GTP-binding prot (548 aa)
initn: 584 init1: 177 opt: 356 Z-score: 295.3 bits: 64.4 E(85289): 1e-09
Smith-Waterman score: 585; 29.8% identity (60.1% similar) in 426 aa overlap (109-502:3-405)
80 90 100 110 120 130
pF1KB8 KLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVI
: :: . .. : .::... :: :::
NP_001 MIESGLINEAQEEIYKKGQSKRIW-GELYKVI
10 20 30
140 150 160 170 180 190
pF1KB8 EASDVVLEVLDARDPLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLESWLNYLKK
..::::..:::::::.: : :..: . . . :.:...::: :::: . :. :..
NP_001 DSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQ
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB8 ELPTVVFRAS-TKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIR
. ::..:.:: :.: :: . . .. ::: .: .: :
NP_001 DYPTLAFHASLTNPFGKGAFIQLLRQ------------FGK----------LHTDKKQIS
100 110 120
260 270 280 290 300 310
pF1KB8 VGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPLNS
:: ::.:::::::.::.:.....:::. : :. : . : ..: .:: :. . .:
NP_001 VGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDS
130 140 150 160 170 180
320 330 340 350 360 370
pF1KB8 SSALALRSPASIEVVK-PMEAASAILSQADARQVVLKYTVPGYRNSLEFFTMLAQRRGMH
. ..:.. ...: .: : . .:.: .: . . : . ...:. .:. :: : :
NP_001 ETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKL
190 200 210 220 230 240
380 390 400 410 420 430
pF1KB8 QKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTS--WTPP---PYFNESIVVDMKSGFNLE
::: :... ..:.. ..: . . .. .::.. . : : . .: . .. :
NP_001 LKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGE
250 260 270 280 290 300
440 450 460
pF1KB8 ELEKNNAQSIRAI------KGPHL-ANS----ILF---QSSGLTNGI----------IEE
:. .. ... ..: .. : ::. :: :. : : . .:
NP_001 EVTETAGEGSESIIKEETEENSHCDANTEMQQILTRVRQNFGKINVVPQFSGDDLVPVEV
310 320 330 340 350 360
470 480 490 500 510 520
pF1KB8 KDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGQQS
.:..::: . .....::.:...:. .:. .: .::
NP_001 SDLEEELESFSDEEEEEQEQQRDDAEESSSEPEEENVGNDTKAVIKALDEKIAKYQKFLD
370 380 390 400 410 420
530 540
pF1KB8 TRSFILDKIIEEDDAYDFSTDYV
NP_001 KAKAKKFSAVRISKGLSEKIFAKPEEQRKTLEEDVDDRAPSKKGKKRKAQREEEQEHSNK
430 440 450 460 470 480
>>NP_037417 (OMIM: 609365) nucleolar GTP-binding protein (731 aa)
initn: 584 init1: 177 opt: 356 Z-score: 293.6 bits: 64.5 E(85289): 1.3e-09
Smith-Waterman score: 580; 30.1% identity (60.7% similar) in 412 aa overlap (123-502:200-588)
100 110 120 130 140 150
pF1KB8 ETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARD
: .::... :: :::..::::..::::::
NP_037 STESYDQGKDRDLVTEDTGVRNEAQEEIYKKGQSKRIW-GELYKVIDSSDVVVQVLDARD
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 PLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLESWLNYLKKELPTVVFRAS-TKP
:.: : :..: . . . :.:...::: :::: . :. :... ::..:.:: :.:
NP_037 PMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNP
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB8 KDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGVIGFPNVGKSSI
:: . . .. ::: .: .: : :: ::.:::::::.
NP_037 FGKGAFIQLLRQ------------FGK----------LHTDKKQISVGFIGYPNVGKSSV
290 300 310 320
280 290 300 310 320 330
pF1KB8 INSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPLNSSSALALRSPASIEV
::.:.....:::. : :. : . : ..: .:: :. . .: . ..:.. ...:
NP_037 INTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEK
330 340 350 360 370 380
340 350 360 370 380
pF1KB8 VK-PMEAASAILSQADARQVVLKYTVPGYRNSLEFFTMLAQRRGMHQKGGIPNVEGAAKL
.: : . .:.: .: . . : . ...:. .:. :: : : ::: :... ..:.
NP_037 IKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKM
390 400 410 420 430 440
390 400 410 420 430 440
pF1KB8 LWSEWTGASLAYYCHPPTS--WTPP---PYFNESIVVDMKSGFNLEELEKNNAQSIRAI-
. ..: . . .. .::.. . : : . .: . .. ::. .. ... ..:
NP_037 VLNDWQRGRIPFFVKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESII
450 460 470 480 490 500
450 460 470 480
pF1KB8 -----KGPHL-ANS----ILF---QSSGLTNGI----------IEEKDIHEELPKRKERK
.. : ::. :: :. : : . .: .:..::: . ....
NP_037 KEETEENSHCDANTEMQQILTRVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESFSDEE
510 520 530 540 550 560
490 500 510 520 530 540
pF1KB8 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGQQSTRSFILDKIIEEDD
.::.:...:. .:. .: .::
NP_037 EEEQEQQRDDAEESSSEPEEENVGNDTKAVIKALDEKIAKYQKFLDKAKAKKFSAVRISK
570 580 590 600 610 620
>>NP_001310552 (OMIM: 609365) nucleolar GTP-binding prot (799 aa)
initn: 584 init1: 177 opt: 340 Z-score: 280.3 bits: 62.2 E(85289): 7.1e-09
Smith-Waterman score: 537; 27.9% identity (56.8% similar) in 458 aa overlap (123-502:200-656)
100 110 120 130 140 150
pF1KB8 ETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARD
: .::... :: :::..::::..::::::
NP_001 STESYDQGKDRDLVTEDTGVRNEAQEEIYKKGQSKRIW-GELYKVIDSSDVVVQVLDARD
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 PLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLESWLNYLKKELPTVVFRAS-TKP
:.: : :..: . . . :.:...::: :::: . :. :... ::..:.:: :.:
NP_001 PMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNP
230 240 250 260 270 280
220 230 240
pF1KB8 KDKGKITKRVKAKKNAAPFRSEVCFGKEGL------W-----------KLLGGFQ-----
:: . . .. . . .. .: :: : . : :.
NP_001 FGKGAFIQLLRQFGKPWHLTFHALLGFPGLLCILCPWSPCSFYVLWLERALPKFKLQIPG
290 300 310 320 330 340
250 260 270 280
pF1KB8 -------------------ETCS-----KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGV
.:: : : :: ::.:::::::.::.:.....:::.
NP_001 QTSAPEGSRGTRLPYQILKASCSLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAP
350 360 370 380 390 400
290 300 310 320 330 340
pF1KB8 SMGLTRSMQVVPLDKQITIIDSPSFIVSPLNSSSALALRSPASIEVVK-PMEAASAILSQ
: :. : . : ..: .:: :. . .: . ..:.. ...: .: : . .:.: .
NP_001 IAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLER
410 420 430 440 450 460
350 360 370 380 390 400
pF1KB8 ADARQVVLKYTVPGYRNSLEFFTMLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYC
: . . : . ...:. .:. :: : : ::: :... ..:.. ..: . . ..
NP_001 AKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFV
470 480 490 500 510 520
410 420 430 440 450
pF1KB8 HPPTS--WTPP---PYFNESIVVDMKSGFNLEELEKNNAQSIRAI------KGPHL-ANS
.::.. . : : . .: . .. ::. .. ... ..: .. : ::.
NP_001 KPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANT
530 540 550 560 570 580
460 470 480 490
pF1KB8 ----ILF---QSSGLTNGI----------IEEKDIHEELPKRKERKQEEREDDKDSDQET
:: :. : : . .: .:..::: . .....::.:...:. .:.
NP_001 EMQQILTRVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEES
590 600 610 620 630 640
500 510 520 530 540
pF1KB8 VDEEVDENSSGMFAAEETGEALSEETTAGQQSTRSFILDKIIEEDDAYDFSTDYV
.: .::
NP_001 SSEPEEENVGNDTKAVIKALDEKIAKYQKFLDKAKAKKFSAVRISKGLSEKIFAKPEEQR
650 660 670 680 690 700
549 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:05:10 2016 done: Fri Nov 4 10:05:11 2016
Total Scan time: 10.890 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]