Result of FASTA (omim) for
pF1KB8129
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8129, 341 aa
1>>>pF1KB8129 341 - 341 aa - 341 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5983+/-0.000353; mu= 10.2453+/- 0.022
mean_var=102.7869+/-19.739, 0's: 0 Z-trim(116.5): 51 B-trim: 116 in 2/54
Lambda= 0.126504
statistics sampled from 27640 (27691) to 27640 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.325), width: 16
Scan time: 5.210
The best scores are: opt bits E(85289)
NP_036534 (OMIM: 601638) arfaptin-2 isoform 2 [Hom ( 341) 2216 414.8 1.3e-115
XP_005252897 (OMIM: 601638) PREDICTED: arfaptin-2 ( 341) 2216 414.8 1.3e-115
NP_001229784 (OMIM: 601638) arfaptin-2 isoform 3 [ ( 303) 1963 368.6 9.5e-102
NP_001229783 (OMIM: 601638) arfaptin-2 isoform 1 [ ( 374) 1794 337.8 2.2e-92
NP_001229785 (OMIM: 601638) arfaptin-2 isoform 4 [ ( 256) 1506 285.2 1.1e-76
NP_001020764 (OMIM: 605928) arfaptin-1 isoform 2 [ ( 341) 1358 258.2 1.8e-68
NP_001274362 (OMIM: 605928) arfaptin-1 isoform 2 [ ( 341) 1358 258.2 1.8e-68
NP_055262 (OMIM: 605928) arfaptin-1 isoform 2 [Hom ( 341) 1358 258.2 1.8e-68
XP_011530173 (OMIM: 605928) PREDICTED: arfaptin-1 ( 347) 1329 252.9 7.2e-67
XP_011530174 (OMIM: 605928) PREDICTED: arfaptin-1 ( 296) 1261 240.5 3.5e-63
NP_001020766 (OMIM: 605928) arfaptin-1 isoform 1 [ ( 373) 1261 240.6 4.2e-63
NP_001274360 (OMIM: 605928) arfaptin-1 isoform 1 [ ( 373) 1261 240.6 4.2e-63
NP_001274361 (OMIM: 605928) arfaptin-1 isoform 1 [ ( 373) 1261 240.6 4.2e-63
XP_011530172 (OMIM: 605928) PREDICTED: arfaptin-1 ( 373) 1261 240.6 4.2e-63
XP_011530171 (OMIM: 605928) PREDICTED: arfaptin-1 ( 373) 1261 240.6 4.2e-63
XP_011530170 (OMIM: 605928) PREDICTED: arfaptin-1 ( 379) 1261 240.6 4.2e-63
XP_016884584 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 334) 178 42.9 0.0012
XP_016884579 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 385) 178 42.9 0.0014
XP_016884581 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 385) 178 42.9 0.0014
XP_006724442 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 175 42.3 0.0016
XP_016884582 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 175 42.3 0.0016
XP_016884583 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 175 42.3 0.0016
XP_006724443 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 175 42.3 0.0016
XP_016884580 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 327) 175 42.3 0.0017
NP_001034672 (OMIM: 605926) PRKCA-binding protein ( 415) 175 42.4 0.0021
NP_036539 (OMIM: 605926) PRKCA-binding protein [Ho ( 415) 175 42.4 0.0021
NP_001034673 (OMIM: 605926) PRKCA-binding protein ( 415) 175 42.4 0.0021
>>NP_036534 (OMIM: 601638) arfaptin-2 isoform 2 [Homo sa (341 aa)
initn: 2216 init1: 2216 opt: 2216 Z-score: 2196.5 bits: 414.8 E(85289): 1.3e-115
Smith-Waterman score: 2216; 100.0% identity (100.0% similar) in 341 aa overlap (1-341:1-341)
10 20 30 40 50 60
pF1KB8 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLIPTGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 GLIPTGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 TVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 EFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 EFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 DLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLL
250 260 270 280 290 300
310 320 330 340
pF1KB8 FHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
:::::::::::::::::::::::::::::::::::::::::
NP_036 FHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
310 320 330 340
>>XP_005252897 (OMIM: 601638) PREDICTED: arfaptin-2 isof (341 aa)
initn: 2216 init1: 2216 opt: 2216 Z-score: 2196.5 bits: 414.8 E(85289): 1.3e-115
Smith-Waterman score: 2216; 100.0% identity (100.0% similar) in 341 aa overlap (1-341:1-341)
10 20 30 40 50 60
pF1KB8 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GLIPTGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLIPTGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 EFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 DLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLL
250 260 270 280 290 300
310 320 330 340
pF1KB8 FHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
:::::::::::::::::::::::::::::::::::::::::
XP_005 FHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
310 320 330 340
>>NP_001229784 (OMIM: 601638) arfaptin-2 isoform 3 [Homo (303 aa)
initn: 1963 init1: 1963 opt: 1963 Z-score: 1947.7 bits: 368.6 E(85289): 9.5e-102
Smith-Waterman score: 1963; 100.0% identity (100.0% similar) in 303 aa overlap (39-341:1-303)
10 20 30 40 50 60
pF1KB8 AATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGDGLIPTGSG
::::::::::::::::::::::::::::::
NP_001 MVSGPNLNETSIVSGGYGGSGDGLIPTGSG
10 20 30
70 80 90 100 110 120
pF1KB8 RHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELEL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 QIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAET
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 QKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 PRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAY
220 230 240 250 260 270
310 320 330 340
pF1KB8 FAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
:::::::::::::::::::::::::::::::::
NP_001 FAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
280 290 300
>>NP_001229783 (OMIM: 601638) arfaptin-2 isoform 1 [Homo (374 aa)
initn: 1794 init1: 1794 opt: 1794 Z-score: 1779.6 bits: 337.8 E(85289): 2.2e-92
Smith-Waterman score: 2133; 91.2% identity (91.2% similar) in 373 aa overlap (2-341:2-374)
10 20 30 40 50 60
pF1KB8 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
10 20 30 40 50 60
70 80
pF1KB8 GLIPTG---------------------------------SGRHPSHSTTPSGPGDEVARG
:::::: :::::::::::::::::::::
NP_001 GLIPTGKSISCARREVWVGPQRCLVYLREAGVRELDPLGSGRHPSHSTTPSGPGDEVARG
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB8 IAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELELQIELLRETKRKYESVLQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELELQIELLRETKRKYESVLQLG
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 RALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGETLLGAVNFFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGETLLGAVNFFV
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB8 SSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQA
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB8 HRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTLQQFNIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTLQQFNIKL
310 320 330 340 350 360
330 340
pF1KB8 RPPGAEKPSWLEEQ
::::::::::::::
NP_001 RPPGAEKPSWLEEQ
370
>>NP_001229785 (OMIM: 601638) arfaptin-2 isoform 4 [Homo (256 aa)
initn: 1506 init1: 1506 opt: 1506 Z-score: 1498.0 bits: 285.2 E(85289): 1.1e-76
Smith-Waterman score: 1506; 99.6% identity (100.0% similar) in 237 aa overlap (105-341:20-256)
80 90 100 110 120 130
pF1KB8 TTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELELQIELLR
.:::::::::::::::::::::::::::::
NP_001 MKPALCLVAMGALVMDSSPQCTKQLLSERFGRGSRTVDLELELQIELLR
10 20 30 40
140 150 160 170 180 190
pF1KB8 ETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCK
50 60 70 80 90 100
200 210 220 230 240 250
pF1KB8 NGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGT
110 120 130 140 150 160
260 270 280 290 300 310
pF1KB8 RGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQK
170 180 190 200 210 220
320 330 340
pF1KB8 QLEQTLQQFNIKLRPPGAEKPSWLEEQ
:::::::::::::::::::::::::::
NP_001 QLEQTLQQFNIKLRPPGAEKPSWLEEQ
230 240 250
>>NP_001020764 (OMIM: 605928) arfaptin-1 isoform 2 [Homo (341 aa)
initn: 1355 init1: 1227 opt: 1358 Z-score: 1350.2 bits: 258.2 E(85289): 1.8e-68
Smith-Waterman score: 1358; 59.9% identity (89.3% similar) in 337 aa overlap (8-341:7-341)
10 20 30 40 50 60
pF1KB8 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
: .. :::. .:::. . .. ....::.. . :: .:.::.:.: :. .. .
NP_001 MAQESPKNSAAEIPVTSNGEVDD-SREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKE
10 20 30 40 50
70 80 90 100 110
pF1KB8 GLIPTGSGRHPSHSTTPSGP---GDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGR
:.: .:. . ... : ::: .::. .. : ::...:.::..::::::.:..::..::
NP_001 GVIEAGAFQGGQRTQTKSGPVILADEI-KNPAMEKLELVRKWSLNTYKCTRQIISEKLGR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 GSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPE
:::::::::: ::..::..:.:::..:.:...:...:.....::. ::::::::: :: :
NP_001 GSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 LQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDA
:.:::::::.::::: :::::::::.:::..:.::::.::.:::::::::::.::.::::
NP_001 LHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 YRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQ
::::::::.::::::.: ..:..: ::::..::.:.:.::..:::::::::.::.:.:
NP_001 YRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQ
240 250 260 270 280 290
300 310 320 330 340
pF1KB8 LLLFHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
:.:::::..::::::::::::::.::.:::. ::.. :::::::
NP_001 LVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ
300 310 320 330 340
>>NP_001274362 (OMIM: 605928) arfaptin-1 isoform 2 [Homo (341 aa)
initn: 1355 init1: 1227 opt: 1358 Z-score: 1350.2 bits: 258.2 E(85289): 1.8e-68
Smith-Waterman score: 1358; 59.9% identity (89.3% similar) in 337 aa overlap (8-341:7-341)
10 20 30 40 50 60
pF1KB8 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
: .. :::. .:::. . .. ....::.. . :: .:.::.:.: :. .. .
NP_001 MAQESPKNSAAEIPVTSNGEVDD-SREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKE
10 20 30 40 50
70 80 90 100 110
pF1KB8 GLIPTGSGRHPSHSTTPSGP---GDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGR
:.: .:. . ... : ::: .::. .. : ::...:.::..::::::.:..::..::
NP_001 GVIEAGAFQGGQRTQTKSGPVILADEI-KNPAMEKLELVRKWSLNTYKCTRQIISEKLGR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 GSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPE
:::::::::: ::..::..:.:::..:.:...:...:.....::. ::::::::: :: :
NP_001 GSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 LQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDA
:.:::::::.::::: :::::::::.:::..:.::::.::.:::::::::::.::.::::
NP_001 LHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 YRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQ
::::::::.::::::.: ..:..: ::::..::.:.:.::..:::::::::.::.:.:
NP_001 YRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQ
240 250 260 270 280 290
300 310 320 330 340
pF1KB8 LLLFHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
:.:::::..::::::::::::::.::.:::. ::.. :::::::
NP_001 LVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ
300 310 320 330 340
>>NP_055262 (OMIM: 605928) arfaptin-1 isoform 2 [Homo sa (341 aa)
initn: 1355 init1: 1227 opt: 1358 Z-score: 1350.2 bits: 258.2 E(85289): 1.8e-68
Smith-Waterman score: 1358; 59.9% identity (89.3% similar) in 337 aa overlap (8-341:7-341)
10 20 30 40 50 60
pF1KB8 MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGD
: .. :::. .:::. . .. ....::.. . :: .:.::.:.: :. .. .
NP_055 MAQESPKNSAAEIPVTSNGEVDD-SREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKE
10 20 30 40 50
70 80 90 100 110
pF1KB8 GLIPTGSGRHPSHSTTPSGP---GDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGR
:.: .:. . ... : ::: .::. .. : ::...:.::..::::::.:..::..::
NP_055 GVIEAGAFQGGQRTQTKSGPVILADEI-KNPAMEKLELVRKWSLNTYKCTRQIISEKLGR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 GSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPE
:::::::::: ::..::..:.:::..:.:...:...:.....::. ::::::::: :: :
NP_055 GSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 LQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDA
:.:::::::.::::: :::::::::.:::..:.::::.::.:::::::::::.::.::::
NP_055 LHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 YRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQ
::::::::.::::::.: ..:..: ::::..::.:.:.::..:::::::::.::.:.:
NP_055 YRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQ
240 250 260 270 280 290
300 310 320 330 340
pF1KB8 LLLFHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
:.:::::..::::::::::::::.::.:::. ::.. :::::::
NP_055 LVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ
300 310 320 330 340
>>XP_011530173 (OMIM: 605928) PREDICTED: arfaptin-1 isof (347 aa)
initn: 1325 init1: 1227 opt: 1329 Z-score: 1321.5 bits: 252.9 E(85289): 7.2e-67
Smith-Waterman score: 1329; 62.6% identity (90.7% similar) in 313 aa overlap (32-341:36-347)
10 20 30 40 50 60
pF1KB8 TDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGDG
:.::.. . :: .:.::.:.: :. .. .:
XP_011 PRFKKKKRITIFGEISWTPAIGSILVPVHQEKDLKHSLPSGLGLSETQITSHGFDNTKEG
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 LIPTGSGRHPSHSTTPSGP---GDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRG
.: .:. . ... : ::: .::. .. : ::...:.::..::::::.:..::..:::
XP_011 VIEAGAFQGGQRTQTKSGPVILADEI-KNPAMEKLELVRKWSLNTYKCTRQIISEKLGRG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 SRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPEL
::::::::: ::..::..:.:::..:.:...:...:.....::. ::::::::: :: ::
XP_011 SRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLEL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 QEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAY
.:::::::.::::: :::::::::.:::..:.::::.::.:::::::::::.::.:::::
XP_011 HEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 RTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQL
:::::::.::::::.: ..:..: ::::..::.:.:.::..:::::::::.::.:.::
XP_011 RTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQL
250 260 270 280 290 300
300 310 320 330 340
pF1KB8 LLFHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ
.:::::..::::::::::::::.::.:::. ::.. :::::::
XP_011 VLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ
310 320 330 340
>>XP_011530174 (OMIM: 605928) PREDICTED: arfaptin-1 isof (296 aa)
initn: 1227 init1: 1227 opt: 1261 Z-score: 1255.4 bits: 240.5 E(85289): 3.5e-63
Smith-Waterman score: 1261; 65.3% identity (91.0% similar) in 288 aa overlap (57-341:15-296)
30 40 50 60 70 80
pF1KB8 EDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGDGLIPTGSGRHPSHSTTPSGP---GDE
:: : ..:.:. : . : ::: .::
XP_011 MSPSRVAASRLAQQGS-DLIVPAGGQR----TQTKSGPVILADE
10 20 30
90 100 110 120 130 140
pF1KB8 VARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELELQIELLRETKRKYESV
. .. : ::...:.::..::::::.:..::..:::::::::::: ::..::..:.:::..
XP_011 I-KNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 LQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGETLLGAV
:.:...:...:.....::. ::::::::: :: ::.:::::::.::::: :::::::::.
XP_011 LKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAI
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 NFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQA
:::..:.::::.::.:::::::::::.::.::::::::::::.::::::.: ..:..:
XP_011 NFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQH
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 TFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTLQQF
::::..::.:.:.::..:::::::::.::.:.::.:::::..::::::::::::::.::
XP_011 LFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQF
220 230 240 250 260 270
330 340
pF1KB8 NIKLRPPGAEKPSWLEEQ
.:::. ::.. :::::::
XP_011 HIKLKTPGVDAPSWLEEQ
280 290
341 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:48:38 2016 done: Fri Nov 4 09:48:39 2016
Total Scan time: 5.210 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]