Result of FASTA (omim) for
pF1KB7973
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7973, 214 aa
1>>>pF1KB7973 214 - 214 aa - 214 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4976+/-0.000366; mu= 9.2724+/- 0.023
mean_var=124.3826+/-24.919, 0's: 0 Z-trim(116.8): 76 B-trim: 1283 in 1/50
Lambda= 0.114999
statistics sampled from 28250 (28332) to 28250 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.332), width: 16
Scan time: 6.050
The best scores are: opt bits E(85289)
NP_937848 (OMIM: 602976) max-like protein X isofor ( 214) 1422 246.5 2.4e-65
XP_016880480 (OMIM: 602976) PREDICTED: max-like pr ( 268) 1322 230.0 2.8e-60
NP_937847 (OMIM: 602976) max-like protein X isofor ( 244) 1237 215.9 4.7e-56
NP_733752 (OMIM: 602976) max-like protein X isofor ( 298) 1237 215.9 5.4e-56
XP_006719355 (OMIM: 608090) PREDICTED: MLX-interac ( 920) 229 49.1 2.8e-05
NP_055753 (OMIM: 608090) MLX-interacting protein [ ( 919) 224 48.3 4.9e-05
XP_006719357 (OMIM: 608090) PREDICTED: MLX-interac ( 567) 204 44.8 0.00034
XP_006719353 (OMIM: 608090) PREDICTED: MLX-interac ( 960) 204 45.0 0.00051
XP_006719354 (OMIM: 608090) PREDICTED: MLX-interac ( 959) 199 44.1 0.0009
>>NP_937848 (OMIM: 602976) max-like protein X isoform al (214 aa)
initn: 1422 init1: 1422 opt: 1422 Z-score: 1294.0 bits: 246.5 E(85289): 2.4e-65
Smith-Waterman score: 1422; 100.0% identity (100.0% similar) in 214 aa overlap (1-214:1-214)
10 20 30 40 50 60
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 IKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 VTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQE
130 140 150 160 170 180
190 200 210
pF1KB7 LSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
::::::::::::::::::::::::::::::::::
NP_937 LSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
190 200 210
>>XP_016880480 (OMIM: 602976) PREDICTED: max-like protei (268 aa)
initn: 1322 init1: 1322 opt: 1322 Z-score: 1203.1 bits: 230.0 E(85289): 2.8e-60
Smith-Waterman score: 1322; 100.0% identity (100.0% similar) in 201 aa overlap (14-214:68-268)
10 20 30 40
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYK
::::::::::::::::::::::::::::::
XP_016 RRGASLLSPKSPTLSVPRGCREDSSHPACAKVEYAYSDNSLDPDDEDSDYHQEAYKESYK
40 50 60 70 80 90
50 60 70 80 90 100
pF1KB7 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL
100 110 120 130 140 150
110 120 130 140 150 160
pF1KB7 HKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD
160 170 180 190 200 210
170 180 190 200 210
pF1KB7 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
220 230 240 250 260
>>NP_937847 (OMIM: 602976) max-like protein X isoform be (244 aa)
initn: 1237 init1: 1237 opt: 1237 Z-score: 1127.4 bits: 215.9 E(85289): 4.7e-56
Smith-Waterman score: 1352; 87.7% identity (87.7% similar) in 244 aa overlap (1-214:1-244)
10 20 30
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDP------------------------------DDED
:::::::::::::::::::::::::: ::::
NP_937 MTEPGASPEDPWVKVEYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVPNTDDED
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 SDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 SDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
190 200 210 220 230 240
pF1KB7 NQLY
::::
NP_937 NQLY
>>NP_733752 (OMIM: 602976) max-like protein X isoform ga (298 aa)
initn: 1329 init1: 1237 opt: 1237 Z-score: 1126.2 bits: 215.9 E(85289): 5.4e-56
Smith-Waterman score: 1252; 87.0% identity (87.0% similar) in 231 aa overlap (14-214:68-298)
10 20
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDP-----------------
:::::::::::::
NP_733 RRGASLLSPKSPTLSVPRGCREDSSHPACAKVEYAYSDNSLDPGLFVESTRKGSVVSRAN
40 50 60 70 80 90
30 40 50 60 70
pF1KB7 -------------DDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVP
:::::::::::::::::::::::::::::::::::::::::::::::
NP_733 SIGSTSASSVPNTDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVP
100 110 120 130 140 150
80 90 100 110 120 130
pF1KB7 TCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 TCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQ
160 170 180 190 200 210
140 150 160 170 180 190
pF1KB7 IVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_733 IVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHC
220 230 240 250 260 270
200 210
pF1KB7 KPQTLREIVIGVLHQLKNQLY
:::::::::::::::::::::
NP_733 KPQTLREIVIGVLHQLKNQLY
280 290
>>XP_006719355 (OMIM: 608090) PREDICTED: MLX-interacting (920 aa)
initn: 360 init1: 155 opt: 229 Z-score: 215.9 bits: 49.1 E(85289): 2.8e-05
Smith-Waterman score: 289; 29.9% identity (62.3% similar) in 204 aa overlap (20-209:695-889)
10 20 30 40
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRA
: . .:... : . . :. :.
XP_006 LHGGSPQVTVTGPSRDCPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKQNRQMK
670 680 690 700 710 720
50 60 70 80 90 100
pF1KB7 HTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKK
: .:::::: :: .: :.... : .:. :.::.::::..:: :..:. .
XP_006 HISAEQKRRFNIKMCFDMLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQERGQ
730 740 750 760 770
110 120 130 140 150
pF1KB7 QEEEVSTLRKDVTALKIMKVNYEQIVKA------HQDNPHEGEDQVSDQVK--------F
..::. ::... :. .. .:.. : ... : .:. .. :: :
XP_006 MQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHM-KDMFDEYVKTRTLQNWKF
780 790 800 810 820 830
160 170 180 190 200 210
pF1KB7 NVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
.:. :. ::.::.. .:..:..:: ..::...::. :: .:...:.::
XP_006 WIFSIIIKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPMVLSTLRQLSTSTSI
840 850 860 870 880 890
XP_006 LTDPAQLPEQASKAVTRIGKRLGES
900 910 920
>>NP_055753 (OMIM: 608090) MLX-interacting protein [Homo (919 aa)
initn: 355 init1: 155 opt: 224 Z-score: 211.4 bits: 48.3 E(85289): 4.9e-05
Smith-Waterman score: 284; 29.9% identity (62.7% similar) in 204 aa overlap (20-209:695-888)
10 20 30 40
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRA
: . .:... : . . :.:. .
NP_055 LHGGSPQVTVTGPSRDCPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKNRQMK-
670 680 690 700 710 720
50 60 70 80 90 100
pF1KB7 HTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKK
: .:::::: :: .: :.... : .:. :.::.::::..:: :..:. .
NP_055 HISAEQKRRFNIKMCFDMLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQERGQ
730 740 750 760 770
110 120 130 140 150
pF1KB7 QEEEVSTLRKDVTALKIMKVNYEQIVKA------HQDNPHEGEDQVSDQVK--------F
..::. ::... :. .. .:.. : ... : .:. .. :: :
NP_055 MQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHM-KDMFDEYVKTRTLQNWKF
780 790 800 810 820 830
160 170 180 190 200 210
pF1KB7 NVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
.:. :. ::.::.. .:..:..:: ..::...::. :: .:...:.::
NP_055 WIFSIIIKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPMVLSTLRQLSTSTSI
840 850 860 870 880 890
NP_055 LTDPAQLPEQASKAVTRIGKRLGES
900 910
>>XP_006719357 (OMIM: 608090) PREDICTED: MLX-interacting (567 aa)
initn: 301 init1: 130 opt: 204 Z-score: 196.3 bits: 44.8 E(85289): 0.00034
Smith-Waterman score: 264; 29.4% identity (60.8% similar) in 194 aa overlap (20-199:302-486)
10 20 30 40
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRA
: . .:... : . . :. :.
XP_006 LHGGSPQVTVTGPSRDCPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKQNRQMK
280 290 300 310 320 330
50 60 70 80 90 100
pF1KB7 HTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKK
: .:::::: :: .: :.... : .:. :.::.::::..:: :..:. .
XP_006 HISAEQKRRFNIKMCFDMLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQERGQ
340 350 360 370 380
110 120 130 140 150
pF1KB7 QEEEVSTLRKDVTALKIMKVNYEQIVKA------HQDNPHEGEDQVSDQVK--------F
..::. ::... :. .. .:.. : ... : .:. .. :: :
XP_006 MQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHM-KDMFDEYVKTRTLQNWKF
390 400 410 420 430 440
160 170 180 190 200 210
pF1KB7 NVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
.:. :. ::.::.. .:..:..:: ..::...::. ::
XP_006 WIFSIIIKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPSYRSLISEQLAAPWH
450 460 470 480 490 500
XP_006 QEQHRMLHLRQLLDLGRLLEAEGGIEHAAAAEHLHLHPHRPGTAARAGVQGCHQDWQEIG
510 520 530 540 550 560
>>XP_006719353 (OMIM: 608090) PREDICTED: MLX-interacting (960 aa)
initn: 335 init1: 130 opt: 204 Z-score: 193.2 bits: 45.0 E(85289): 0.00051
Smith-Waterman score: 264; 29.4% identity (60.8% similar) in 194 aa overlap (20-199:695-879)
10 20 30 40
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRA
: . .:... : . . :. :.
XP_006 LHGGSPQVTVTGPSRDCPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKQNRQMK
670 680 690 700 710 720
50 60 70 80 90 100
pF1KB7 HTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKK
: .:::::: :: .: :.... : .:. :.::.::::..:: :..:. .
XP_006 HISAEQKRRFNIKMCFDMLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQERGQ
730 740 750 760 770
110 120 130 140 150
pF1KB7 QEEEVSTLRKDVTALKIMKVNYEQIVKA------HQDNPHEGEDQVSDQVK--------F
..::. ::... :. .. .:.. : ... : .:. .. :: :
XP_006 MQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHM-KDMFDEYVKTRTLQNWKF
780 790 800 810 820 830
160 170 180 190 200 210
pF1KB7 NVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
.:. :. ::.::.. .:..:..:: ..::...::. ::
XP_006 WIFSIIIKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPSYRSLISEQLAAPWH
840 850 860 870 880 890
XP_006 QEQHRMLHLRQLLDLGRLLEAEGGIEHAAAAEHLHLHPHRPGTAARAGVQGCHQDWQEIG
900 910 920 930 940 950
>>XP_006719354 (OMIM: 608090) PREDICTED: MLX-interacting (959 aa)
initn: 330 init1: 130 opt: 199 Z-score: 188.7 bits: 44.1 E(85289): 0.0009
Smith-Waterman score: 259; 29.4% identity (61.3% similar) in 194 aa overlap (20-199:695-878)
10 20 30 40
pF1KB7 MTEPGASPEDPWVKVEYAYSDNSLDPDDEDSDYHQEAYKESYKDRRRRA
: . .:... : . . :.:. .
XP_006 LHGGSPQVTVTGPSRDCPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKNRQMK-
670 680 690 700 710 720
50 60 70 80 90 100
pF1KB7 HTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKK
: .:::::: :: .: :.... : .:. :.::.::::..:: :..:. .
XP_006 HISAEQKRRFNIKMCFDMLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQERGQ
730 740 750 760 770
110 120 130 140 150
pF1KB7 QEEEVSTLRKDVTALKIMKVNYEQIVKA------HQDNPHEGEDQVSDQVK--------F
..::. ::... :. .. .:.. : ... : .:. .. :: :
XP_006 MQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHM-KDMFDEYVKTRTLQNWKF
780 790 800 810 820 830
160 170 180 190 200 210
pF1KB7 NVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
.:. :. ::.::.. .:..:..:: ..::...::. ::
XP_006 WIFSIIIKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPSYRSLISEQLAAPWH
840 850 860 870 880 890
XP_006 QEQHRMLHLRQLLDLGRLLEAEGGIEHAAAAEHLHLHPHRPGTAARAGVQGCHQDWQEIG
900 910 920 930 940 950
214 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:47:58 2016 done: Sat Nov 5 14:47:59 2016
Total Scan time: 6.050 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]