Result of FASTA (omim) for
pF1KB7953
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7953, 256 aa
1>>>pF1KB7953 256 - 256 aa - 256 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4778+/-0.000383; mu= 14.4095+/- 0.024
mean_var=98.5847+/-19.564, 0's: 0 Z-trim(114.1): 182 B-trim: 0 in 0/54
Lambda= 0.129172
statistics sampled from 23497 (23742) to 23497 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.278), width: 16
Scan time: 6.610
The best scores are: opt bits E(85289)
NP_038462 (OMIM: 604662) calsenilin isoform 1 [Hom ( 256) 1713 329.6 3.5e-90
NP_001030086 (OMIM: 604662) calsenilin isoform 2 p ( 230) 1303 253.1 3.2e-67
NP_079497 (OMIM: 608182) Kv channel-interacting pr ( 250) 1074 210.5 2.4e-54
NP_001030175 (OMIM: 608182) Kv channel-interacting ( 225) 1070 209.7 3.7e-54
NP_671710 (OMIM: 608182) Kv channel-interacting pr ( 216) 1068 209.3 4.7e-54
NP_671712 (OMIM: 608182) Kv channel-interacting pr ( 229) 1066 208.9 6.3e-54
XP_005248247 (OMIM: 608182) PREDICTED: Kv channel- ( 233) 1066 208.9 6.4e-54
NP_775286 (OMIM: 604661) Kv channel-interacting pr ( 225) 1046 205.2 8.3e-53
NP_775287 (OMIM: 604661) Kv channel-interacting pr ( 220) 1043 204.6 1.2e-52
NP_001030176 (OMIM: 608182) Kv channel-interacting ( 188) 1036 203.3 2.7e-52
NP_671711 (OMIM: 608182) Kv channel-interacting pr ( 188) 1036 203.3 2.7e-52
XP_016864142 (OMIM: 608182) PREDICTED: Kv channel- ( 188) 1036 203.3 2.7e-52
NP_775284 (OMIM: 604661) Kv channel-interacting pr ( 252) 1035 203.2 3.7e-52
XP_016871650 (OMIM: 604661) PREDICTED: Kv channel- ( 230) 1034 203.0 4e-52
NP_775283 (OMIM: 604661) Kv channel-interacting pr ( 270) 1034 203.0 4.4e-52
NP_055406 (OMIM: 604661) Kv channel-interacting pr ( 285) 1034 203.1 4.6e-52
NP_775285 (OMIM: 604661) Kv channel-interacting pr ( 227) 1019 200.2 2.7e-51
XP_016864896 (OMIM: 604660) PREDICTED: Kv channel- ( 225) 1004 197.4 1.9e-50
NP_001030010 (OMIM: 604660) Kv channel-interacting ( 225) 1004 197.4 1.9e-50
NP_055407 (OMIM: 604660) Kv channel-interacting pr ( 216) 1002 197.0 2.4e-50
NP_001030009 (OMIM: 604660) Kv channel-interacting ( 227) 1002 197.0 2.5e-50
XP_011512184 (OMIM: 608182) PREDICTED: Kv channel- ( 257) 990 194.8 1.3e-49
XP_011512187 (OMIM: 608182) PREDICTED: Kv channel- ( 232) 986 194.0 2e-49
XP_011512188 (OMIM: 608182) PREDICTED: Kv channel- ( 223) 984 193.6 2.5e-49
XP_011512186 (OMIM: 608182) PREDICTED: Kv channel- ( 236) 982 193.3 3.3e-49
XP_011512185 (OMIM: 608182) PREDICTED: Kv channel- ( 240) 982 193.3 3.4e-49
NP_001265269 (OMIM: 604660) Kv channel-interacting ( 188) 978 192.5 4.8e-49
XP_011538033 (OMIM: 604661) PREDICTED: Kv channel- ( 230) 963 189.7 3.8e-48
XP_005269787 (OMIM: 604661) PREDICTED: Kv channel- ( 225) 960 189.2 5.5e-48
XP_011512191 (OMIM: 608182) PREDICTED: Kv channel- ( 195) 952 187.6 1.4e-47
XP_011512189 (OMIM: 608182) PREDICTED: Kv channel- ( 195) 952 187.6 1.4e-47
XP_005269786 (OMIM: 604661) PREDICTED: Kv channel- ( 257) 952 187.7 1.7e-47
XP_006717875 (OMIM: 604661) PREDICTED: Kv channel- ( 275) 951 187.6 2e-47
NP_001265268 (OMIM: 604660) Kv channel-interacting ( 241) 677 136.5 4.4e-32
NP_055101 (OMIM: 603315) neuronal calcium sensor 1 ( 190) 578 117.9 1.3e-26
NP_001122298 (OMIM: 603315) neuronal calcium senso ( 172) 541 111.0 1.5e-24
XP_005246218 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
XP_005246219 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
XP_016859441 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
XP_016859440 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
XP_016859442 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
NP_002134 (OMIM: 142622,224500) neuron-specific ca ( 193) 538 110.5 2.3e-24
NP_001245287 (OMIM: 600207) hippocalcin-like prote ( 193) 538 110.5 2.3e-24
XP_005246220 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
XP_011508650 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
XP_005270849 (OMIM: 142622,224500) PREDICTED: neur ( 193) 538 110.5 2.3e-24
NP_001245288 (OMIM: 600207) hippocalcin-like prote ( 193) 538 110.5 2.3e-24
XP_011508649 (OMIM: 600207) PREDICTED: hippocalcin ( 193) 538 110.5 2.3e-24
NP_602293 (OMIM: 600207) hippocalcin-like protein ( 193) 538 110.5 2.3e-24
NP_002140 (OMIM: 600207) hippocalcin-like protein ( 193) 538 110.5 2.3e-24
>>NP_038462 (OMIM: 604662) calsenilin isoform 1 [Homo sa (256 aa)
initn: 1713 init1: 1713 opt: 1713 Z-score: 1740.1 bits: 329.6 E(85289): 3.5e-90
Smith-Waterman score: 1713; 100.0% identity (100.0% similar) in 256 aa overlap (1-256:1-256)
10 20 30 40 50 60
pF1KB7 MQPAKEVTKASDGSLLGDLGHTPLSKKEGIKWQRPRLSRQALMRCCLVKWILSSTAPQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 MQPAKEVTKASDGSLLGDLGHTPLSKKEGIKWQRPRLSRQALMRCCLVKWILSSTAPQGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DSSDSELELSTVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 DSSDSELELSTVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 FFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 YITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 YITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQ
190 200 210 220 230 240
250
pF1KB7 KDENIMSSMQLFENVI
::::::::::::::::
NP_038 KDENIMSSMQLFENVI
250
>>NP_001030086 (OMIM: 604662) calsenilin isoform 2 precu (230 aa)
initn: 1303 init1: 1303 opt: 1303 Z-score: 1327.8 bits: 253.1 E(85289): 3.2e-67
Smith-Waterman score: 1303; 100.0% identity (100.0% similar) in 196 aa overlap (61-256:35-230)
40 50 60 70 80 90
pF1KB7 KWQRPRLSRQALMRCCLVKWILSSTAPQGSDSSDSELELSTVRHQPEGLDQLQAQTKFTK
::::::::::::::::::::::::::::::
NP_001 GMELCAMAVVVLLFIAVLKQFGILEPISMEDSSDSELELSTVRHQPEGLDQLQAQTKFTK
10 20 30 40 50 60
100 110 120 130 140 150
pF1KB7 KELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDADGNGAIHFED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDADGNGAIHFED
70 80 90 100 110 120
160 170 180 190 200 210
pF1KB7 FVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDA
130 140 150 160 170 180
220 230 240 250
pF1KB7 PAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI
190 200 210 220 230
>>NP_079497 (OMIM: 608182) Kv channel-interacting protei (250 aa)
initn: 1060 init1: 1060 opt: 1074 Z-score: 1096.7 bits: 210.5 E(85289): 2.4e-54
Smith-Waterman score: 1080; 66.9% identity (85.7% similar) in 245 aa overlap (12-256:15-250)
10 20 30 40 50
pF1KB7 MQPAKEVTKASDGSLLGDLGHTPLSKKEGIKWQRPRLSRQALMRCCLVKWILSSTAP
..: : . .. : :..:: :: . :. : .: ...:
NP_079 MNVRRVESISAQLEEASSTGGFLYAQNSTKRSIK---ERLMK--LLPCSAAK----TSSP
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 QGSDSSDSELELSTVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLI
..: ..:::..::::.::.:. :.::.:::::::: ::::::::::.:.:.:.::: :
NP_079 AIQNSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 YAQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDIN
:.:::::::.::::::::::::.: :::. ::::. ::::::::::.:::.:::::::::
NP_079 YSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDIN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 KDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLE
::::::::::: :::.::::::. :::.:.:::: .::: ::.:::.:.::::::.::.:
NP_079 KDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIE
180 190 200 210 220 230
240 250
pF1KB7 ACQKDENIMSSMQLFENVI
.:::::::: :::::::::
NP_079 SCQKDENIMRSMQLFENVI
240 250
>>NP_001030175 (OMIM: 608182) Kv channel-interacting pro (225 aa)
initn: 1068 init1: 1068 opt: 1070 Z-score: 1093.2 bits: 209.7 E(85289): 3.7e-54
Smith-Waterman score: 1070; 71.0% identity (88.8% similar) in 224 aa overlap (34-256:5-225)
10 20 30 40 50 60
pF1KB7 AKEVTKASDGSLLGDLGHTPLSKKEGIKWQRPRLSRQALMRCCLVKWILSS-TAPQGSDS
: : .:. : .....: :. .::
NP_001 MSGCRKRCKREILK---FAQYLLRLLTGSLHTDS
10 20 30
70 80 90 100 110 120
pF1KB7 SDSELELSTVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQFF
..:::..::::.::.:. :.::.:::::::: ::::::::::.:.:.:.::: ::.:::
NP_001 VEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFF
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB7 PQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYI
::::.::::::::::::.: :::. ::::. ::::::::::.:::.::::::::::::::
NP_001 PQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYI
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB7 TKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKD
:::::: :::.::::::. :::.:.:::: .::: ::.:::.:.::::::.::.:.::::
NP_001 TKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKD
160 170 180 190 200 210
250
pF1KB7 ENIMSSMQLFENVI
:::: :::::::::
NP_001 ENIMRSMQLFENVI
220
>>NP_671710 (OMIM: 608182) Kv channel-interacting protei (216 aa)
initn: 1068 init1: 1068 opt: 1068 Z-score: 1091.4 bits: 209.3 E(85289): 4.7e-54
Smith-Waterman score: 1068; 76.6% identity (93.0% similar) in 201 aa overlap (56-256:16-216)
30 40 50 60 70 80
pF1KB7 KKEGIKWQRPRLSRQALMRCCLVKWILSSTAPQGSDSSDSELELSTVRHQPEGLDQLQAQ
: . .:: ..:::..::::.::.:. :.::
NP_671 MNVRRVESISAQLEEASSTGDSVEDELEMATVRHRPEALELLEAQ
10 20 30 40
90 100 110 120 130 140
pF1KB7 TKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDADGNGA
.:::::::: ::::::::::.:.:.:.::: ::.:::::::.::::::::::::.: :::
NP_671 SKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGA
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB7 IHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPI
. ::::. ::::::::::.:::.:::::::::::::::::::: :::.::::::. :::.
NP_671 VSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPV
110 120 130 140 150 160
210 220 230 240 250
pF1KB7 LREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI
:.:::: .::: ::.:::.:.::::::.::.:.:::::::: :::::::::
NP_671 LKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
170 180 190 200 210
>>NP_671712 (OMIM: 608182) Kv channel-interacting protei (229 aa)
initn: 1066 init1: 1066 opt: 1066 Z-score: 1089.1 bits: 208.9 E(85289): 6.3e-54
Smith-Waterman score: 1066; 78.1% identity (93.9% similar) in 196 aa overlap (61-256:34-229)
40 50 60 70 80 90
pF1KB7 KWQRPRLSRQALMRCCLVKWILSSTAPQGSDSSDSELELSTVRHQPEGLDQLQAQTKFTK
:: ..:::..::::.::.:. :.::.::::
NP_671 EGLEMIAVLIVIVLFVKLLEQFGLIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTK
10 20 30 40 50 60
100 110 120 130 140 150
pF1KB7 KELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDADGNGAIHFED
:::: ::::::::::.:.:.:.::: ::.:::::::.::::::::::::.: :::. :::
NP_671 KELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFED
70 80 90 100 110 120
160 170 180 190 200 210
pF1KB7 FVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDA
:. ::::::::::.:::.:::::::::::::::::::: :::.::::::. :::.:.:::
NP_671 FIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDA
130 140 150 160 170 180
220 230 240 250
pF1KB7 PAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI
: .::: ::.:::.:.::::::.::.:.:::::::: :::::::::
NP_671 PRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
190 200 210 220
>>XP_005248247 (OMIM: 608182) PREDICTED: Kv channel-inte (233 aa)
initn: 1066 init1: 1066 opt: 1066 Z-score: 1089.0 bits: 208.9 E(85289): 6.4e-54
Smith-Waterman score: 1066; 78.1% identity (93.9% similar) in 196 aa overlap (61-256:38-233)
40 50 60 70 80 90
pF1KB7 KWQRPRLSRQALMRCCLVKWILSSTAPQGSDSSDSELELSTVRHQPEGLDQLQAQTKFTK
:: ..:::..::::.::.:. :.::.::::
XP_005 SEGLQTVGIVVIICASLKLLHLLGLIDFSEDSVEDELEMATVRHRPEALELLEAQSKFTK
10 20 30 40 50 60
100 110 120 130 140 150
pF1KB7 KELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDADGNGAIHFED
:::: ::::::::::.:.:.:.::: ::.:::::::.::::::::::::.: :::. :::
XP_005 KELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFED
70 80 90 100 110 120
160 170 180 190 200 210
pF1KB7 FVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDA
:. ::::::::::.:::.:::::::::::::::::::: :::.::::::. :::.:.:::
XP_005 FIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDA
130 140 150 160 170 180
220 230 240 250
pF1KB7 PAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI
: .::: ::.:::.:.::::::.::.:.:::::::: :::::::::
XP_005 PRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
190 200 210 220 230
>>NP_775286 (OMIM: 604661) Kv channel-interacting protei (225 aa)
initn: 1035 init1: 1035 opt: 1046 Z-score: 1069.1 bits: 205.2 E(85289): 8.3e-53
Smith-Waterman score: 1046; 69.2% identity (86.6% similar) in 224 aa overlap (35-256:5-225)
10 20 30 40 50 60
pF1KB7 KEVTKASDGSLLGDLGHTPLSKKEGIKWQRPRLSRQALMRCC--LVKWILSSTAPQGSDS
:: :. : . : . . .: .: ::
NP_775 MNRCPRRCRSPLGQAARSLYQLVTGSLSP---DS
10 20 30
70 80 90 100 110 120
pF1KB7 SDSELELSTVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQFF
:.:.::::: :.::::.::: :::::.:::: ::::::::::.:.:.:..:: ::.:::
NP_775 VDDEFELSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFF
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB7 PQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYI
::::..::: :::::::.. .:.. :::::.:::..::::: ..:.:::::::.:::: :
NP_775 PQGDSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCI
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB7 TKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKD
:::::: ::::::::::..::: :::.:: :::: ::.:::::.:::::::::.:.::::
NP_775 TKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKD
160 170 180 190 200 210
250
pF1KB7 ENIMSSMQLFENVI
:::: :::::.:::
NP_775 ENIMRSMQLFDNVI
220
>>NP_775287 (OMIM: 604661) Kv channel-interacting protei (220 aa)
initn: 1043 init1: 1043 opt: 1043 Z-score: 1066.2 bits: 204.6 E(85289): 1.2e-52
Smith-Waterman score: 1043; 73.2% identity (91.2% similar) in 205 aa overlap (52-256:16-220)
30 40 50 60 70 80
pF1KB7 TPLSKKEGIKWQRPRLSRQALMRCCLVKWILSSTAPQGSDSSDSELELSTVRHQPEGLDQ
:... : .:: :.:.::::: :.::::.:
NP_775 MRGQGRKESLSDSRDLDGSYDQLTDSVDDEFELSTVCHRPEGLEQ
10 20 30 40
90 100 110 120 130 140
pF1KB7 LQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDAD
:: :::::.:::: ::::::::::.:.:.:..:: ::.:::::::..::: :::::::..
NP_775 LQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTN
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB7 GNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRH
.:.. :::::.:::..::::: ..:.:::::::.:::: ::::::: ::::::::::..
NP_775 HDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKY
110 120 130 140 150 160
210 220 230 240 250
pF1KB7 TYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI
::: :::.:: :::: ::.:::::.:::::::::.:.:::::::: :::::.:::
NP_775 TYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
170 180 190 200 210 220
>>NP_001030176 (OMIM: 608182) Kv channel-interacting pro (188 aa)
initn: 1036 init1: 1036 opt: 1036 Z-score: 1060.0 bits: 203.3 E(85289): 2.7e-52
Smith-Waterman score: 1036; 78.7% identity (94.1% similar) in 188 aa overlap (69-256:1-188)
40 50 60 70 80 90
pF1KB7 RQALMRCCLVKWILSSTAPQGSDSSDSELELSTVRHQPEGLDQLQAQTKFTKKELQSLYR
..::::.::.:. :.::.:::::::: :::
NP_001 MATVRHRPEALELLEAQSKFTKKELQILYR
10 20 30
100 110 120 130 140 150
pF1KB7 GFKNECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSIL
:::::::.:.:.:.::: ::.:::::::.::::::::::::.: :::. ::::. :::::
NP_001 GFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSIL
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB7 LRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERF
:::::.:::.:::::::::::::::::::: :::.::::::. :::.:.:::: .::: :
NP_001 LRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETF
100 110 120 130 140 150
220 230 240 250
pF1KB7 FEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI
:.:::.:.::::::.::.:.:::::::: :::::::::
NP_001 FQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENVI
160 170 180
256 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:15:50 2016 done: Sat Nov 5 10:15:51 2016
Total Scan time: 6.610 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]