Result of FASTA (ccds) for
pF1KB7945
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7945, 391 aa
1>>>pF1KB7945 391 - 391 aa - 391 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3140+/-0.000873; mu= 4.8265+/- 0.053
mean_var=196.9237+/-39.961, 0's: 0 Z-trim(112.8): 38 B-trim: 5 in 1/53
Lambda= 0.091396
statistics sampled from 13489 (13525) to 13489 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.415), width: 16
Scan time: 2.570
The best scores are: opt bits E(32554)
CCDS6607.1 PAX5 gene_id:5079|Hs108|chr9 ( 391) 2631 359.1 4.1e-99
CCDS65048.1 PAX5 gene_id:5079|Hs108|chr9 ( 362) 2261 310.2 1.9e-84
CCDS65047.1 PAX5 gene_id:5079|Hs108|chr9 ( 357) 2027 279.4 3.6e-75
CCDS65046.1 PAX5 gene_id:5079|Hs108|chr9 ( 328) 2017 278.0 8.4e-75
CCDS65040.1 PAX5 gene_id:5079|Hs108|chr9 ( 283) 1899 262.4 3.6e-70
CCDS41561.1 PAX2 gene_id:5076|Hs108|chr10 ( 394) 1855 256.7 2.6e-68
CCDS65045.1 PAX5 gene_id:5079|Hs108|chr9 ( 324) 1735 240.8 1.3e-63
CCDS65044.1 PAX5 gene_id:5079|Hs108|chr9 ( 295) 1728 239.9 2.3e-63
CCDS7499.1 PAX2 gene_id:5076|Hs108|chr10 ( 396) 1546 216.0 4.8e-56
CCDS65043.1 PAX5 gene_id:5079|Hs108|chr9 ( 348) 1310 184.8 1e-46
CCDS65039.1 PAX5 gene_id:5079|Hs108|chr9 ( 220) 1285 181.4 7e-46
CCDS46399.1 PAX8 gene_id:7849|Hs108|chr2 ( 398) 1174 166.9 2.8e-41
CCDS46398.1 PAX8 gene_id:7849|Hs108|chr2 ( 450) 1138 162.2 8.3e-40
CCDS65041.1 PAX5 gene_id:5079|Hs108|chr9 ( 291) 1109 158.3 8.4e-39
CCDS42735.1 PAX8 gene_id:7849|Hs108|chr2 ( 287) 1105 157.7 1.2e-38
CCDS42736.1 PAX8 gene_id:7849|Hs108|chr2 ( 321) 1100 157.1 2.1e-38
CCDS65042.1 PAX5 gene_id:5079|Hs108|chr9 ( 319) 1069 153.0 3.5e-37
CCDS31451.1 PAX6 gene_id:5080|Hs108|chr11 ( 422) 755 111.7 1.3e-24
CCDS46522.1 PAX3 gene_id:5077|Hs108|chr2 ( 483) 694 103.7 3.7e-22
CCDS13146.2 PAX1 gene_id:5075|Hs108|chr20 ( 534) 692 103.5 4.8e-22
CCDS2450.1 PAX3 gene_id:5077|Hs108|chr2 ( 403) 682 102.1 9.6e-22
CCDS2449.1 PAX3 gene_id:5077|Hs108|chr2 ( 407) 682 102.1 9.7e-22
CCDS42826.1 PAX3 gene_id:5077|Hs108|chr2 ( 479) 682 102.1 1.1e-21
CCDS42825.1 PAX3 gene_id:5077|Hs108|chr2 ( 484) 682 102.1 1.1e-21
CCDS2448.1 PAX3 gene_id:5077|Hs108|chr2 ( 505) 682 102.2 1.1e-21
CCDS2451.1 PAX3 gene_id:5077|Hs108|chr2 ( 206) 660 98.9 4.3e-21
CCDS46523.1 PAX3 gene_id:5077|Hs108|chr2 ( 215) 660 99.0 4.4e-21
CCDS74709.1 PAX1 gene_id:5075|Hs108|chr20 ( 457) 666 100.0 4.5e-21
CCDS44075.1 PAX7 gene_id:5081|Hs108|chr1 ( 518) 651 98.1 2e-20
CCDS44074.1 PAX7 gene_id:5081|Hs108|chr1 ( 505) 645 97.3 3.3e-20
CCDS186.1 PAX7 gene_id:5081|Hs108|chr1 ( 520) 645 97.3 3.4e-20
CCDS9662.1 PAX9 gene_id:5083|Hs108|chr14 ( 341) 638 96.2 4.7e-20
CCDS5797.1 PAX4 gene_id:5078|Hs108|chr7 ( 343) 542 83.6 3.1e-16
CCDS31452.1 PAX6 gene_id:5080|Hs108|chr11 ( 436) 506 78.9 9.8e-15
>>CCDS6607.1 PAX5 gene_id:5079|Hs108|chr9 (391 aa)
initn: 2631 init1: 2631 opt: 2631 Z-score: 1892.9 bits: 359.1 E(32554): 4.1e-99
Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRF
310 320 330 340 350 360
370 380 390
pF1KB7 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
:::::::::::::::::::::::::::::::
CCDS66 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
370 380 390
>>CCDS65048.1 PAX5 gene_id:5079|Hs108|chr9 (362 aa)
initn: 2290 init1: 2261 opt: 2261 Z-score: 1629.7 bits: 310.2 E(32554): 1.9e-84
Smith-Waterman score: 2347; 92.6% identity (92.6% similar) in 391 aa overlap (1-391:1-362)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRF
:::::::::::::::::::::::::::::::::::::::
CCDS65 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGS---------------------
310 320 330
370 380 390
pF1KB7 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
:::::::::::::::::::::::
CCDS65 --------PYYYSAAARGAAPPAAATAYDRH
340 350 360
>>CCDS65047.1 PAX5 gene_id:5079|Hs108|chr9 (357 aa)
initn: 2078 init1: 2018 opt: 2027 Z-score: 1463.0 bits: 279.4 E(32554): 3.6e-75
Smith-Waterman score: 2313; 91.3% identity (91.3% similar) in 391 aa overlap (1-391:1-357)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRF
:::: ::::::::::::::::::::::
CCDS65 IVTG----------------------------------SEFSGSPYSHPQYSSYNDSWRF
310 320
370 380 390
pF1KB7 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
:::::::::::::::::::::::::::::::
CCDS65 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
330 340 350
>>CCDS65046.1 PAX5 gene_id:5079|Hs108|chr9 (328 aa)
initn: 2042 init1: 2013 opt: 2017 Z-score: 1456.4 bits: 278.0 E(32554): 8.4e-75
Smith-Waterman score: 2039; 83.9% identity (83.9% similar) in 391 aa overlap (1-391:1-328)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRF
::::
CCDS65 IVTG--------------------------------------------------------
370 380 390
pF1KB7 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
::::::::::::::::::::::::
CCDS65 -------SPYYYSAAARGAAPPAAATAYDRH
310 320
>>CCDS65040.1 PAX5 gene_id:5079|Hs108|chr9 (283 aa)
initn: 1899 init1: 1899 opt: 1899 Z-score: 1373.2 bits: 262.4 E(32554): 3.6e-70
Smith-Waterman score: 1899; 100.0% identity (100.0% similar) in 283 aa overlap (109-391:1-283)
80 90 100 110 120 130
pF1KB7 KPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRI
::::::::::::::::::::::::::::::
CCDS65 MFAWEIRDRLLAERVCDNDTVPSVSSINRI
10 20 30
140 150 160 170 180 190
pF1KB7 IRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYSISGILGITSPSADTNKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 IRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYSISGILGITSPSADTNKRK
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB7 RDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRVFERQHYSDIFTTTEPIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 RDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRVFERQHYSDIFTTTEPIKP
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB7 EQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYPIVTGRDLASTTLPGYPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYPIVTGRDLASTTLPGYPPH
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB7 VPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRFPNPGLLGSPYYYSAAARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 VPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRFPNPGLLGSPYYYSAAARG
220 230 240 250 260 270
380 390
pF1KB7 AAPPAAATAYDRH
:::::::::::::
CCDS65 AAPPAAATAYDRH
280
>>CCDS41561.1 PAX2 gene_id:5076|Hs108|chr10 (394 aa)
initn: 1563 init1: 883 opt: 1855 Z-score: 1339.9 bits: 256.7 E(32554): 2.6e-68
Smith-Waterman score: 1855; 70.7% identity (85.2% similar) in 399 aa overlap (1-391:1-394)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::.. . . . :::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
CCDS41 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVP--------ASSHSIVSTGSVTQVSSVST
: .::::::::::::::::::::::: . :.: : .:.:: . . :::.:.
CCDS41 EGICDNDTVPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASN
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 DSAGSSYSISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQ
: .:: :::.::::: : .. .:::::: ..:. :::: : : : :::..:.: ::::
CCDS41 DPVGS-YSINGILGI--PRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 QLEVLDRVFERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSS
:::.::::::: : :.: ..: :: :: .::: . .:. :::..:..:.. : ..::.
CCDS41 QLEALDRVFERPSYPDVFQASEHIKSEQGNEYS-LPALTPGLDEVKSSLSASTNPELGSN
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 VPGPQSYPIVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYS
: : :.::.:::::.::::::::::::::.::::: . ::.::::::::::.:::::::.
CCDS41 VSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYT
300 310 320 330 340 350
360 370 380 390
pF1KB7 SYNDSWRFPNPGLLGSPYYYSAAARGAAPPAAATAYDRH
.::..::: ::.::.:::::::: ::.:: :::.:::::
CCDS41 AYNEAWRFSNPALLSSPYYYSAAPRGSAPAAAAAAYDRH
360 370 380 390
>>CCDS65045.1 PAX5 gene_id:5079|Hs108|chr9 (324 aa)
initn: 1769 init1: 1735 opt: 1735 Z-score: 1255.5 bits: 240.8 E(32554): 1.3e-63
Smith-Waterman score: 1749; 82.8% identity (87.3% similar) in 331 aa overlap (1-330:1-316)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
190 200 210 220 230 240
250 260 270 280 290
pF1KB7 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASP-TPADIGSSVPGPQSY
:::::::::::::::::::: . . .. . :.:. : : . :: . : .
CCDS65 FERQHYSDIFTTTEPIKPEQGVSFPGVPT---------ATLSIPRTTTPGGSPTRGCLAP
250 260 270 280 290
300 310 320 330 340 350
pF1KB7 PIVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWR
: . . : :::. : . . :
CCDS65 PTIIALP------PEEPPHLQPPLPMTVTDPWSQAGTKH
300 310 320
360 370 380 390
pF1KB7 FPNPGLLGSPYYYSAAARGAAPPAAATAYDRH
>>CCDS65044.1 PAX5 gene_id:5079|Hs108|chr9 (295 aa)
initn: 1757 init1: 1728 opt: 1728 Z-score: 1251.1 bits: 239.9 E(32554): 2.3e-63
Smith-Waterman score: 1728; 100.0% identity (100.0% similar) in 260 aa overlap (1-260:1-260)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
::::::::::::::::::::
CCDS65 FERQHYSDIFTTTEPIKPEQAPPTIIALPPEEPPHLQPPLPMTVTDPWSQAGTKH
250 260 270 280 290
>>CCDS7499.1 PAX2 gene_id:5076|Hs108|chr10 (396 aa)
initn: 1273 init1: 883 opt: 1546 Z-score: 1119.7 bits: 216.0 E(32554): 4.8e-56
Smith-Waterman score: 1546; 68.0% identity (82.7% similar) in 359 aa overlap (1-349:1-354)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::.. . . . :::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
CCDS74 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVP--------ASSHSIVSTGSVTQVSSVST
: .::::::::::::::::::::::: . :.: : .:.:: . . :::.:.
CCDS74 EGICDNDTVPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASN
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 DSAGSSYSISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQ
: .:: :::.::::: : .. .:::::: ..:. :::: : : : :::..:.: ::::
CCDS74 DPVGS-YSINGILGI--PRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 QLEVLDRVFERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSS
:::.::::::: : :.: ..: :: :: .::: . .:. :::..:..:.. : ..::.
CCDS74 QLEALDRVFERPSYPDVFQASEHIKSEQGNEYS-LPALTPGLDEVKSSLSASTNPELGSN
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 VPGPQSYPIVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEF--SGSPYSHPQ
: : :.::.:::::.::::::::::::::.::::: . ::.:::: . :.: .:.:
CCDS74 VSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPEAAVGPSSSLMSKPG
300 310 320 330 340 350
360 370 380 390
pF1KB7 YSSYNDSWRFPNPGLLGSPYYYSAAARGAAPPAAATAYDRH
CCDS74 RKLAEVPPCVQPTGASSPATRTATPSTRPTTRLGDSATPPY
360 370 380 390
>>CCDS65043.1 PAX5 gene_id:5079|Hs108|chr9 (348 aa)
initn: 2362 init1: 1307 opt: 1310 Z-score: 952.3 bits: 184.8 E(32554): 1e-46
Smith-Waterman score: 2280; 89.0% identity (89.0% similar) in 391 aa overlap (1-391:1-348)
10 20 30 40 50 60
pF1KB7 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYS
::::::::::::::::::::::::::::::::::::::
CCDS65 ERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSI----------------------
130 140 150
190 200 210 220 230 240
pF1KB7 ISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
:::::::::::::::::::::::::::::::::::::::
CCDS65 ---------------------GIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
160 170 180 190
250 260 270 280 290 300
pF1KB7 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 FERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYP
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB7 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRF
260 270 280 290 300 310
370 380 390
pF1KB7 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
:::::::::::::::::::::::::::::::
CCDS65 PNPGLLGSPYYYSAAARGAAPPAAATAYDRH
320 330 340
391 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 08:23:06 2016 done: Sat Nov 5 08:23:07 2016
Total Scan time: 2.570 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]