Result of FASTA (omim) for
pF1KB7904
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7904, 328 aa
1>>>pF1KB7904 328 - 328 aa - 328 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7387+/-0.000448; mu= 13.9776+/- 0.028
mean_var=74.1653+/-14.518, 0's: 0 Z-trim(110.8): 23 B-trim: 390 in 2/52
Lambda= 0.148927
statistics sampled from 19227 (19245) to 19227 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.599), E-opt: 0.2 (0.226), width: 16
Scan time: 7.410
The best scores are: opt bits E(85289)
NP_852001 (OMIM: 602947) transcription initiation ( 328) 2139 469.1 5.5e-132
XP_016866858 (OMIM: 602947) PREDICTED: transcripti ( 330) 2047 449.4 4.9e-126
XP_016866859 (OMIM: 602947) PREDICTED: transcripti ( 330) 2047 449.4 4.9e-126
XP_011513251 (OMIM: 602947) PREDICTED: transcripti ( 330) 2047 449.4 4.9e-126
XP_016866862 (OMIM: 602947) PREDICTED: transcripti ( 296) 1840 404.9 1.1e-112
NP_003590 (OMIM: 602947) transcription initiation ( 317) 1833 403.4 3.3e-112
XP_016866860 (OMIM: 602947) PREDICTED: transcripti ( 317) 1833 403.4 3.3e-112
XP_016866861 (OMIM: 602947) PREDICTED: transcripti ( 317) 1833 403.4 3.3e-112
XP_011513255 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6 3e-106
XP_011513254 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6 3e-106
XP_011513253 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6 3e-106
XP_011513252 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6 3e-106
XP_011513256 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6 3e-106
XP_016866863 (OMIM: 602947) PREDICTED: transcripti ( 233) 1418 314.1 1.8e-85
NP_001248752 (OMIM: 602947) transcription initiati ( 165) 1093 244.2 1.4e-64
>>NP_852001 (OMIM: 602947) transcription initiation prot (328 aa)
initn: 2139 init1: 2139 opt: 2139 Z-score: 2490.5 bits: 469.1 E(85289): 5.5e-132
Smith-Waterman score: 2139; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
250 260 270 280 290 300
310 320
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
::::::::::::::::::::::::::::
NP_852 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
310 320
>>XP_016866858 (OMIM: 602947) PREDICTED: transcription i (330 aa)
initn: 2047 init1: 2047 opt: 2047 Z-score: 2383.7 bits: 449.4 E(85289): 4.9e-126
Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
250 260 270 280 290 300
310 320
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
:::::::::::::::
XP_016 IRRYSHRIGPLSPFTETAAEFHEVLWIVLP
310 320 330
>>XP_016866859 (OMIM: 602947) PREDICTED: transcription i (330 aa)
initn: 2047 init1: 2047 opt: 2047 Z-score: 2383.7 bits: 449.4 E(85289): 4.9e-126
Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
250 260 270 280 290 300
310 320
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
:::::::::::::::
XP_016 IRRYSHRIGPLSPFTETAAEFHEVLWIVLP
310 320 330
>>XP_011513251 (OMIM: 602947) PREDICTED: transcription i (330 aa)
initn: 2047 init1: 2047 opt: 2047 Z-score: 2383.7 bits: 449.4 E(85289): 4.9e-126
Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
250 260 270 280 290 300
310 320
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
:::::::::::::::
XP_011 IRRYSHRIGPLSPFTETAAEFHEVLWIVLP
310 320 330
>>XP_016866862 (OMIM: 602947) PREDICTED: transcription i (296 aa)
initn: 1840 init1: 1840 opt: 1840 Z-score: 2144.0 bits: 404.9 E(85289): 1.1e-112
Smith-Waterman score: 1848; 90.2% identity (90.2% similar) in 328 aa overlap (1-328:1-296)
10 20 30 40 50 60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
:::::::::::: ::::::::::::::::
XP_016 MVVFGTTFFNFD--------------------------------RYSLGDARRPLHETAV
10 20
70 80 90 100 110 120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
210 220 230 240 250 260
310 320
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
::::::::::::::::::::::::::::
XP_016 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
270 280 290
>>NP_003590 (OMIM: 602947) transcription initiation prot (317 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 2135.4 bits: 403.4 E(85289): 3.3e-112
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 283 aa overlap (46-328:35-317)
20 30 40 50 60 70
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
::::::::::::::::::::::::::::::
NP_003 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
250 260 270 280 290 300
320
pF1KB7 NAYRRNGMAFLAC
:::::::::::::
NP_003 NAYRRNGMAFLAC
310
>>XP_016866860 (OMIM: 602947) PREDICTED: transcription i (317 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 2135.4 bits: 403.4 E(85289): 3.3e-112
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 283 aa overlap (46-328:35-317)
20 30 40 50 60 70
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
::::::::::::::::::::::::::::::
XP_016 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
250 260 270 280 290 300
320
pF1KB7 NAYRRNGMAFLAC
:::::::::::::
XP_016 NAYRRNGMAFLAC
310
>>XP_016866861 (OMIM: 602947) PREDICTED: transcription i (317 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 2135.4 bits: 403.4 E(85289): 3.3e-112
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 283 aa overlap (46-328:35-317)
20 30 40 50 60 70
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
::::::::::::::::::::::::::::::
XP_016 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
250 260 270 280 290 300
320
pF1KB7 NAYRRNGMAFLAC
:::::::::::::
XP_016 NAYRRNGMAFLAC
310
>>XP_011513255 (OMIM: 602947) PREDICTED: transcription i (319 aa)
initn: 1741 init1: 1741 opt: 1741 Z-score: 2028.6 bits: 383.6 E(85289): 3e-106
Smith-Waterman score: 1741; 100.0% identity (100.0% similar) in 270 aa overlap (46-315:35-304)
20 30 40 50 60 70
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
::::::::::::::::::::::::::::::
XP_011 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
250 260 270 280 290 300
320
pF1KB7 NAYRRNGMAFLAC
XP_011 ETAAEFHEVLWIVLP
310
>>XP_011513254 (OMIM: 602947) PREDICTED: transcription i (319 aa)
initn: 1741 init1: 1741 opt: 1741 Z-score: 2028.6 bits: 383.6 E(85289): 3e-106
Smith-Waterman score: 1741; 100.0% identity (100.0% similar) in 270 aa overlap (46-315:35-304)
20 30 40 50 60 70
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
::::::::::::::::::::::::::::::
XP_011 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
250 260 270 280 290 300
320
pF1KB7 NAYRRNGMAFLAC
XP_011 ETAAEFHEVLWIVLP
310
328 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:34:42 2016 done: Sat Nov 5 14:34:43 2016
Total Scan time: 7.410 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]