FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7850, 623 aa
  1>>>pF1KB7850 623 - 623 aa - 623 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.2060+/-0.00167; mu= 2.8485+/- 0.096
 mean_var=504.0348+/-124.990, 0's: 0 Z-trim(106.8): 601  B-trim: 442 in 1/50
 Lambda= 0.057127
 statistics sampled from 8532 (9200) to 8532 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.283), width:  16
 Scan time:  3.460

The best scores are:                                      opt bits E(32554)
CCDS78005.1 ZNF131 gene_id:7690|Hs108|chr5         ( 623) 4141 357.4 3.3e-98
CCDS43313.1 ZNF131 gene_id:7690|Hs108|chr5         ( 589) 2358 210.4 5.5e-54


>>CCDS78005.1 ZNF131 gene_id:7690|Hs108|chr5              (623 aa)
 initn: 4141 init1: 4141 opt: 4141  Z-score: 1876.7  bits: 357.4 E(32554): 3.3e-98
Smith-Waterman score: 4141; 100.0% identity (100.0% similar) in 623 aa overlap (1-623:1-623)

               10        20        30        40        50        60
pF1KB7 MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 KFFQEFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 KFFQEFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LEVRNKENSAPLEENTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LEVRNKENSAPLEENTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DEGIETLEEVASAKQSVKYIQSTGSSDDSALALLADITSKYRQGDRKGQIKEDGCPSDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 DEGIETLEEVASAKQSVKYIQSTGSSDDSALALLADITSKYRQGDRKGQIKEDGCPSDPT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 SKQVEGIEIVELQLSHVKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SKQVEGIEIVELQLSHVKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 SAWKQHLNCYHLEEGGVSKKQRTGKKIHVCQYCEKQFDHFGHFKEHLRKHTGEKPFECPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SAWKQHLNCYHLEEGGVSKKQRTGKKIHVCQYCEKQFDHFGHFKEHLRKHTGEKPFECPN
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 CHERFARNSTLKCHLTACQTGVGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 CHERFARNSTLKCHLTACQTGVGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 HCTLCDLWFMQGNELRRHLSDAHNISERLVTEEVLSVETRVQTEPVTSMTIIEQVGKVHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 HCTLCDLWFMQGNELRRHLSDAHNISERLVTEEVLSVETRVQTEPVTSMTIIEQVGKVHV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB7 LPLLQVQVDSAQVTVEQVHPDLLQDSQVHDSHMSELPEQVQVSYLEVGRIQTEEGTEVHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LPLLQVQVDSAQVTVEQVHPDLLQDSQVHDSHMSELPEQVQVSYLEVGRIQTEEGTEVHV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB7 EELHVERVNQMPVEVQTELLEADLDHVTPEIMNQEERESSQADAAEAAREDHEDAEDLET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 EELHVERVNQMPVEVQTELLEADLDHVTPEIMNQEERESSQADAAEAAREDHEDAEDLET
              550       560       570       580       590       600

              610       620   
pF1KB7 KPTVDSEAEKAENEDRTALPVLE
       :::::::::::::::::::::::
CCDS78 KPTVDSEAEKAENEDRTALPVLE
              610       620   

>>CCDS43313.1 ZNF131 gene_id:7690|Hs108|chr5              (589 aa)
 initn: 2358 init1: 2358 opt: 2358  Z-score: 1082.7  bits: 210.4 E(32554): 5.5e-54
Smith-Waterman score: 3827; 94.5% identity (94.5% similar) in 623 aa overlap (1-623:1-589)

               10        20        30        40        50        60
pF1KB7 MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 KFFQEFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KFFQEFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LEVRNKENSAPLEENTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LEVRNKENSAPLEENTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DEGIETLEEVASAKQSVKYIQSTGSSDDSALALLADITSKYRQGDRKGQIKEDGCPSDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEGIETLEEVASAKQSVKYIQSTGSSDDSALALLADITSKYRQGDRKGQIKEDGCPSDPT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 SKQVEGIEIVELQLSHVKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRE
       :::                                  :::::::::::::::::::::::
CCDS43 SKQ----------------------------------EHMKSHSTESFKCEICNKRYLRE
                                                250       260      

              310       320       330       340       350       360
pF1KB7 SAWKQHLNCYHLEEGGVSKKQRTGKKIHVCQYCEKQFDHFGHFKEHLRKHTGEKPFECPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SAWKQHLNCYHLEEGGVSKKQRTGKKIHVCQYCEKQFDHFGHFKEHLRKHTGEKPFECPN
        270       280       290       300       310       320      

              370       380       390       400       410       420
pF1KB7 CHERFARNSTLKCHLTACQTGVGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CHERFARNSTLKCHLTACQTGVGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPN
        330       340       350       360       370       380      

              430       440       450       460       470       480
pF1KB7 HCTLCDLWFMQGNELRRHLSDAHNISERLVTEEVLSVETRVQTEPVTSMTIIEQVGKVHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HCTLCDLWFMQGNELRRHLSDAHNISERLVTEEVLSVETRVQTEPVTSMTIIEQVGKVHV
        390       400       410       420       430       440      

              490       500       510       520       530       540
pF1KB7 LPLLQVQVDSAQVTVEQVHPDLLQDSQVHDSHMSELPEQVQVSYLEVGRIQTEEGTEVHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LPLLQVQVDSAQVTVEQVHPDLLQDSQVHDSHMSELPEQVQVSYLEVGRIQTEEGTEVHV
        450       460       470       480       490       500      

              550       560       570       580       590       600
pF1KB7 EELHVERVNQMPVEVQTELLEADLDHVTPEIMNQEERESSQADAAEAAREDHEDAEDLET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EELHVERVNQMPVEVQTELLEADLDHVTPEIMNQEERESSQADAAEAAREDHEDAEDLET
        510       520       530       540       550       560      

              610       620   
pF1KB7 KPTVDSEAEKAENEDRTALPVLE
       :::::::::::::::::::::::
CCDS43 KPTVDSEAEKAENEDRTALPVLE
        570       580         




623 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:37:47 2016 done: Fri Nov  4 22:37:47 2016
 Total Scan time:  3.460 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]