Result of FASTA (ccds) for
pF1KB7821
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7821, 536 aa
1>>>pF1KB7821 536 - 536 aa - 536 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8195+/-0.0011; mu= 6.5692+/- 0.066
mean_var=125.1048+/-24.966, 0's: 0 Z-trim(106.6): 34 B-trim: 63 in 1/51
Lambda= 0.114667
statistics sampled from 9049 (9072) to 9049 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.279), width: 16
Scan time: 2.830
The best scores are: opt bits E(32554)
CCDS5124.1 HSF2 gene_id:3298|Hs108|chr6 ( 536) 3453 582.8 3.3e-166
CCDS47470.1 HSF2 gene_id:3298|Hs108|chr6 ( 518) 2554 434.1 1.9e-121
CCDS6419.1 HSF1 gene_id:3297|Hs108|chr8 ( 529) 837 150.1 6.2e-36
CCDS42175.1 HSF4 gene_id:3299|Hs108|chr16 ( 492) 670 122.4 1.2e-27
CCDS45510.1 HSF4 gene_id:3299|Hs108|chr16 ( 462) 649 118.9 1.3e-26
>>CCDS5124.1 HSF2 gene_id:3298|Hs108|chr6 (536 aa)
initn: 3453 init1: 3453 opt: 3453 Z-score: 3097.3 bits: 582.8 E(32554): 3.3e-166
Smith-Waterman score: 3453; 100.0% identity (100.0% similar) in 536 aa overlap (1-536:1-536)
10 20 30 40 50 60
pF1KB7 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETTK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP
430 440 450 460 470 480
490 500 510 520 530
pF1KB7 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS
490 500 510 520 530
>>CCDS47470.1 HSF2 gene_id:3298|Hs108|chr6 (518 aa)
initn: 3324 init1: 2548 opt: 2554 Z-score: 2293.8 bits: 434.1 E(32554): 1.9e-121
Smith-Waterman score: 3292; 96.6% identity (96.6% similar) in 536 aa overlap (1-536:1-518)
10 20 30 40 50 60
pF1KB7 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETTK
:::::::::::::::::::::::::::::::: ::::::::::
CCDS47 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVD------------------SENKGLETTK
370 380 390 400
430 440 450 460 470 480
pF1KB7 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP
410 420 430 440 450 460
490 500 510 520 530
pF1KB7 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS
470 480 490 500 510
>>CCDS6419.1 HSF1 gene_id:3297|Hs108|chr8 (529 aa)
initn: 706 init1: 493 opt: 837 Z-score: 758.6 bits: 150.1 E(32554): 6.2e-36
Smith-Waterman score: 1009; 39.7% identity (65.7% similar) in 478 aa overlap (5-457:13-480)
10 20 30 40 50
pF1KB7 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKY
:::::::.:::::: . :. .: :: .:.:: :.:. .::::.::::
CCDS64 MDLPVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 FKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKRKV
::::::::::::::::::::::::..: .:: ::: .::::: : .::..:::::::::
CCDS64 FKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDD-TEFQHPCFLRGQEQLLENIKRKV
70 80 90 100 110
120 130 140 150 160
pF1KB7 SSS---KPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKH
.: : :. ::::...::.....: .. ::: ..:.: .: :::.::.::. :: ::
CCDS64 TSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKH
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 AQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQK---KNLFQHIVKEPTDNHH
::::.:. :..::...:::.:.....::: ::.:: .:. . : : ... .
CCDS64 AQQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGP
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB7 HKVP---HSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYP
...: .: . : :. :: :.: : :. : .. : :. :
CCDS64 YSAPSPAYSSSSLYAPDAVASSGPIISDIT------ELAPASPMASPGGSIDERPLSSSP
240 250 260 270 280 290
290 300 310 320 330
pF1KB7 DIVIVEDDNEDEYAPVIQSGEQNEPAR-ESLSSGS---DG----SSPLMSSAVQLNGSSS
. . :. .: .. . ..:. ..: : . :. : : .:.. :. . .
CCDS64 LVRVKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARG
300 310 320 330 340 350
340 350 360 370 380
pF1KB7 LT-------SEDPVTMMDSILNDNINLLGKVELLDYLDSIDCSLEDFQAMLSGRQFSIDP
: : :.. .. : .. : : :: :.::..: .:...:.:::.. ::.:
CCDS64 HTDTEGRPPSPPPTSTPEKCL--SVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDT
360 370 380 390 400 410
390 400 410 420 430 440
pF1KB7 DLLVDLFTSSVQMNPTDYINNTKSENKGLETTKNNVVQPVSEEGRKSKSKPDKQLIQYTA
. :.:::. :: . : . . : ... . : :...:. :::..:::
CCDS64 SALLDLFSPSVTV-PDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTA
420 430 440 450 460 470
450 460 470 480 490 500
pF1KB7 FPLLAFLDGNPASSVEQASTTASSEVLSSVDKPIEVDELLDSSLDPEPTQSKLVRLEPLT
::. . :.
CCDS64 QPLFLLDPGSVDTGSNDLPVLFELGEGSYFSEGDGFAEDPTISLLTGSEPPKAKDPTVS
480 490 500 510 520
>>CCDS42175.1 HSF4 gene_id:3299|Hs108|chr16 (492 aa)
initn: 674 init1: 625 opt: 670 Z-score: 609.8 bits: 122.4 E(32554): 1.2e-27
Smith-Waterman score: 670; 34.4% identity (63.1% similar) in 404 aa overlap (5-399:15-403)
10 20 30 40 50
pF1KB7 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP
: :::::.:::.:: . :...: :: .: :::: :..:::::.::
CCDS42 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
60 70 80 90 100
pF1KB7 KYFKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKR
.::::.:::::::::::::::::: :..: ... ::: :::::: : .:...::: ..:
CCDS42 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDH-VEFQHPSFVRGREQLLERVRR
70 80 90 100 110
110 120 130 140 150 160
pF1KB7 KVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHA
:: . . .... : ::: .... .: .. ::. :.:: ::...:: ::.:: :: .:.
CCDS42 KVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHG
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 QQQQVIRKIVQFIVTLVQNNQL-VSLKRKRPLLLNTNGAQKKNLFQHIVKEP----TDNH
::..:: :..: . .: . .. ::: :.:. ... . : : .
CCDS42 QQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPY
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB7 HHKVPHSRTE-GLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPD
. : .:. ::.:.. . :: :. .:. . :: .. .: :. .
CCDS42 FIQSPLPETNLGLSPHR--ARGPIISDIPEDSPS-------PEGTR--LSPSSDGRREKG
240 250 260 270 280
290 300 310 320 330 340
pF1KB7 IVIVEDDNEDEYAPVIQSGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTM
....... . . ..: : . .. . :. . :.:..:.. : : .
CCDS42 LALLKEEPASPGGDG-EAGLALAPNECDFCVTAPPPLPVAVVQAILEGKGSFSPEGPRNA
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB7 MDSILNDNINLLGKVELLDYLDSIDCSLEDF--QAMLSGRQFSIDPDLLVDLFTSSVQMN
.. .: .. . : :.: : : :.. .:. : :..: .:.. :.:
CCDS42 QQPEPGDPREIPDRGPL--GLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGR
350 360 370 380 390 400
410 420 430 440 450 460
pF1KB7 PTDYINNTKSENKGLETTKNNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASS
CCDS42 EWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALG
410 420 430 440 450 460
>>CCDS45510.1 HSF4 gene_id:3299|Hs108|chr16 (462 aa)
initn: 649 init1: 625 opt: 649 Z-score: 591.4 bits: 118.9 E(32554): 1.3e-26
Smith-Waterman score: 649; 50.7% identity (78.1% similar) in 201 aa overlap (5-203:15-214)
10 20 30 40 50
pF1KB7 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP
: :::::.:::.:: . :...: :: .: :::: :..:::::.::
CCDS45 MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP
10 20 30 40 50 60
60 70 80 90 100
pF1KB7 KYFKHNNMASFVRQLNMYGFRKVVHIDSG-IVKQERDGPVEFQHPYFKQGQDDLLENIKR
.::::.:::::::::::::::::: :..: ... ::: :::::: : .:...::: ..:
CCDS45 QYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDH-VEFQHPSFVRGREQLLERVRR
70 80 90 100 110
110 120 130 140 150 160
pF1KB7 KVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHA
:: . . .... : ::: .... .: .. ::. :.:: ::...:: ::.:: :: .:.
CCDS45 KVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHG
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 QQQQVIRKIVQFIVTLVQNNQL-VSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKV
::..:: :..: . .: . .. ::: :.:.
CCDS45 QQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPY
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB7 PHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVE
CCDS45 FIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVAVV
240 250 260 270 280 290
536 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:26:24 2016 done: Fri Nov 4 22:26:25 2016
Total Scan time: 2.830 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]