Result of FASTA (ccds) for
pF1KB7820
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7820, 599 aa
1>>>pF1KB7820 599 - 599 aa - 599 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2761+/-0.000897; mu= 1.0276+/- 0.054
mean_var=189.2893+/-38.095, 0's: 0 Z-trim(113.1): 25 B-trim: 3 in 1/52
Lambda= 0.093220
statistics sampled from 13793 (13814) to 13793 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.424), width: 16
Scan time: 3.090
The best scores are: opt bits E(32554)
CCDS14455.1 DACH2 gene_id:117154|Hs108|chrX ( 599) 3929 540.8 1.8e-153
CCDS55457.1 DACH2 gene_id:117154|Hs108|chrX ( 432) 2810 390.3 2.8e-108
CCDS48140.1 DACH2 gene_id:117154|Hs108|chrX ( 571) 2649 368.7 1.2e-101
CCDS41899.1 DACH1 gene_id:1602|Hs108|chr13 ( 706) 943 139.3 1.6e-32
>>CCDS14455.1 DACH2 gene_id:117154|Hs108|chrX (599 aa)
initn: 3929 init1: 3929 opt: 3929 Z-score: 2868.6 bits: 540.8 E(32554): 1.8e-153
Smith-Waterman score: 3929; 100.0% identity (100.0% similar) in 599 aa overlap (1-599:1-599)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
490 500 510 520 530 540
550 560 570 580 590
pF1KB7 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
550 560 570 580 590
>>CCDS55457.1 DACH2 gene_id:117154|Hs108|chrX (432 aa)
initn: 2810 init1: 2810 opt: 2810 Z-score: 2057.4 bits: 390.3 E(32554): 2.8e-108
Smith-Waterman score: 2810; 100.0% identity (100.0% similar) in 432 aa overlap (168-599:1-432)
140 150 160 170 180 190
pF1KB7 QPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPGRPPKRSLGVLQENARLL
::::::::::::::::::::::::::::::
CCDS55 MTRKQAVNSSRPGRPPKRSLGVLQENARLL
10 20 30
200 210 220 230 240 250
pF1KB7 THAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 THAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNT
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB7 GGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLNPLQQNHLLTNRLDLPFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLNPLQQNHLLTNRLDLPFM
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB7 MMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSP
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB7 APSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQIPIMKSPLDKIQLTPGQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 APSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQIPIMKSPLDKIQLTPGQA
220 230 240 250 260 270
440 450 460 470 480 490
pF1KB7 LPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREI
280 290 300 310 320 330
500 510 520 530 540 550
pF1KB7 RENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGL
340 350 360 370 380 390
560 570 580 590
pF1KB7 RMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
::::::::::::::::::::::::::::::::::::::::::
CCDS55 RMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
400 410 420 430
>>CCDS48140.1 DACH2 gene_id:117154|Hs108|chrX (571 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 1938.5 bits: 368.7 E(32554): 1.2e-101
Smith-Waterman score: 3698; 97.8% identity (97.8% similar) in 583 aa overlap (1-583:1-570)
10 20 30 40 50 60
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 GNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPG
:::::::::::::::::::::::::::::::::::::::::: :::::
CCDS48 VVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNA-------------SSRPG
130 140 150 160
190 200 210 220 230 240
pF1KB7 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 RPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAAAMAEAMKLQKMKLMAMNTLQGN
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 GSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLN
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB7 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLS
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB7 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 RAGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB7 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PIMKSPLDKIQLTPGQALPAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQI
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB7 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 QQEKKELRLELYREREIRENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRR
470 480 490 500 510 520
550 560 570 580 590
pF1KB7 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA
:::::::::::::::::::::::::::::::::::::::::::
CCDS48 EQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTPHDSAAMQA
530 540 550 560 570
>>CCDS41899.1 DACH1 gene_id:1602|Hs108|chr13 (706 aa)
initn: 1787 init1: 577 opt: 943 Z-score: 697.1 bits: 139.3 E(32554): 1.6e-32
Smith-Waterman score: 1821; 51.2% identity (68.6% similar) in 643 aa overlap (4-588:148-699)
10 20 30
pF1KB7 MAVSASPVISATSSGAGVPGGLFRAEPLYSTPR
:.: :..::... : . ..:.::::
CCDS41 GGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS
120 130 140 150 160 170
40 50 60 70 80 90
pF1KB7 EPPRLTPNMINSFVVNNHSNSAGGGGRGNTNTNECRMVDMHGMKVASFLMDGQELICLPQ
: . ::. .:::.:::..: ::::: ..: :::::::
CCDS41 -PVENTPQ-----------------------NNECKMVDLRGAKVASFTVEGCELICLPQ
180 190 200 210
100 110 120 130 140 150
pF1KB7 VFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFE
.::::::::::::::::::::::.:.::::.:::::::::::::::::::::::.:::::
CCDS41 AFDLFLKHLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFE
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB7 TLFTDCTNARRKRQMTRKQAVNSSRPGRPPKRSLGVLQ-ENARLLTHAVPGLLSPGLITP
::..::::: ::::::::::. .: . ::.... :.::::.:::.: :
CCDS41 TLYNDCTNA-------------SSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPP
280 290 300 310 320
220 230 240 250 260
pF1KB7 TGITAAA----------MAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNTGGSES
::.:::: .:::::..:.:: ::.. .....:.:..:: :.::..:
CCDS41 TGLTAAAAAAAAATNAAIAEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVG----
330 340 350 360 370
270 280 290 300 310 320
pF1KB7 SWDKDKMQSPFAAPGPQHGIAHAALAGQPGIGGAPTLNPLQQNHLLTNRLDLPFMMMPHP
:.:::::::::
CCDS41 -------------------------------------------------LELPFMMMPHP
380
330 340 350 360 370 380
pF1KB7 LLPVSLPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSPAPSLE
:.:::::::::.:::.:::::.::::::::::..:: ::. :::::::.:.:::::::::
CCDS41 LIPVSLPPASVTMAMSQMNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLE
390 400 410 420 430 440
390 400
pF1KB7 ENHRPGSQTSSHTSSSVSSSPSQ-------------------------------------
:..::::. ::: ::::::::..
CCDS41 EGRRPGSHPSSHRSSSVSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDL
450 460 470 480 490 500
410 420 430 440 450
pF1KB7 ----MDHHLERM----EEVPVQIPIMKSPLDKIQLTP-GQALPAGFPGPFIFADSLSSVE
: :. .:: .:.:.. : .. :::..:: :: :: :::.::.: :.:::.:
CCDS41 AGHDMGHESKRMHIEKDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIE
510 520 530 540 550 560
460 470 480 490 500 510
pF1KB7 TLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREIRENLERQLAVELQSRTTMQ
:::::::::::::.:::: ::::.: :: ::.... ::::.::.::.:::.: ..:. .:
CCDS41 TLLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQ
570 580 590 600 610 620
520 530 540 550 560 570
pF1KB7 KRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGLRMLKDTGIPDIEIENNGTP
::::::::.:::::::::::.:::::.::.::::...:: ::.:.:. :.:: . .:
CCDS41 KRLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDS-LRVLNDSLTPEIEADRSGGR
630 640 650 660 670 680
580 590
pF1KB7 HDSA-AMQGGNYYCLEMAQQLYSA
:. ..: : :
CCDS41 TDAERTIQDGRLYLKTTVMY
690 700
599 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 09:50:43 2016 done: Sat Nov 5 09:50:44 2016
Total Scan time: 3.090 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]