FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7794, 519 aa
  1>>>pF1KB7794 519 - 519 aa - 519 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.7637+/-0.000902; mu= -1.3088+/- 0.054
 mean_var=218.7614+/-44.700, 0's: 0 Z-trim(114.7): 41  B-trim: 392 in 1/52
 Lambda= 0.086714
 statistics sampled from 15219 (15260) to 15219 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.788), E-opt: 0.2 (0.469), width:  16
 Scan time:  4.140

The best scores are:                                      opt bits E(32554)
CCDS53620.1 CREB3L1 gene_id:90993|Hs108|chr11      ( 519) 3488 448.8 6.7e-126
CCDS34760.1 CREB3L2 gene_id:64764|Hs108|chr7       ( 520)  984 135.6 1.3e-31


>>CCDS53620.1 CREB3L1 gene_id:90993|Hs108|chr11           (519 aa)
 initn: 3488 init1: 3488 opt: 3488  Z-score: 2373.8  bits: 448.8 E(32554): 6.7e-126
Smith-Waterman score: 3488; 100.0% identity (100.0% similar) in 519 aa overlap (1-519:1-519)

               10        20        30        40        50        60
pF1KB7 MDAVLEPFPADRLFPGSSFLDLGDLNESDFLNNAHFPEHLDHFTENMEDFSNDLFSSFFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MDAVLEPFPADRLFPGSSFLDLGDLNESDFLNNAHFPEHLDHFTENMEDFSNDLFSSFFD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 DPVLDEKSPLLDMELDSPTPGIQAEHSYSLSGDSAPQSPLVPIKMEDTTQDAEHGAWALG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DPVLDEKSPLLDMELDSPTPGIQAEHSYSLSGDSAPQSPLVPIKMEDTTQDAEHGAWALG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 HKLCSIMVKQEQSPELPVDPLAAPSAMAAAAAMATTPLLGLSPLSRLPIPHQAPGEMTQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HKLCSIMVKQEQSPELPVDPLAAPSAMAAAAAMATTPLLGLSPLSRLPIPHQAPGEMTQL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 PVIKAEPLEVNQFLKVTPEDLVQMPPTPPSSHGSDSDGSQSPRSLPPSSPVRPMARSSTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PVIKAEPLEVNQFLKVTPEDLVQMPPTPPSSHGSDSDGSQSPRSLPPSSPVRPMARSSTA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 ISTSPLLTAPHKLQGTSGPLLLTEEEKRTLIAEGYPIPTKLPLTKAEEKALKRVRRKIKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ISTSPLLTAPHKLQGTSGPLLLTEEEKRTLIAEGYPIPTKLPLTKAEEKALKRVRRKIKN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANRTLLQQLQKLQTLVTNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANRTLLQQLQKLQTLVTNK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 ISRPYKMAATQTGTCLMVAALCFVLVLGSLVPCLPEFSSGSQTVKEDPLAADGVYTASQM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ISRPYKMAATQTGTCLMVAALCFVLVLGSLVPCLPEFSSGSQTVKEDPLAADGVYTASQM
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 PSRSLLFYDDGAGLWEDGRSTLLPMEPPDGWEINPGGPAEQRPRDHLQHDHLDSTHETTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PSRSLLFYDDGAGLWEDGRSTLLPMEPPDGWEINPGGPAEQRPRDHLQHDHLDSTHETTK
              430       440       450       460       470       480

              490       500       510         
pF1KB7 YLSEAWPKDGGNGTSPDFSHSKEWFHDRDLGPNTTIKLS
       :::::::::::::::::::::::::::::::::::::::
CCDS53 YLSEAWPKDGGNGTSPDFSHSKEWFHDRDLGPNTTIKLS
              490       500       510         

>>CCDS34760.1 CREB3L2 gene_id:64764|Hs108|chr7            (520 aa)
 initn: 940 init1: 710 opt: 984  Z-score: 680.8  bits: 135.6 E(32554): 1.3e-31
Smith-Waterman score: 1186; 51.7% identity (74.0% similar) in 404 aa overlap (42-430:35-434)

              20        30        40        50        60        70 
pF1KB7 RLFPGSSFLDLGDLNESDFLNNAHFPEHLDHFTENMEDFSNDLFSSFFDDPVLDEKSPLL
                                     ::.: ...::.........:: :.:::  .
CCDS34 ESGEQGVLQWDRKLSELSEPGDGEALMYHTHFSELLDEFSQNVLGQLLNDPFLSEKSVSM
           10        20        30        40        50        60    

                80        90       100       110         120       
pF1KB7 DMELD--SPTPGIQAEHSYSLSGDSAPQSPLVPIKMEDTTQD--AEHGAWALGHKLCSIM
       ..: .  ::.: :::::::::  .   :::.. :   :. .:  .:   : :.  . :  
CCDS34 EVEPSPTSPAPLIQAEHSYSLCEEPRAQSPFTHITTSDSFNDDEVESEKWYLSTDFPSTS
           70        80        90       100       110       120    

       130       140       150       160       170       180       
pF1KB7 VKQEQSPELPVDPLAAPSAMAAAAAMATTPLLGLSPLSRLPIPHQAPGEMTQLPVIKAEP
       .: :   . :  :  .::.  . .:. .:::    :  ..    ..  . : .: :: ::
CCDS34 IKTEPVTDEP-PPGLVPSVTLTITAI-STPLEKEEPPLEMNTGVDSSCQ-TIIPKIKLEP
          130        140        150       160       170        180 

       190           200       210       220              230      
pF1KB7 LEVNQFLKVTPE----DLVQMPPTPPSSHGSDSDGSQSPR------SLPPS-SPVRPMAR
        ::.:::. .:.    : ...::::::::::::.:: ::       ::: . :: :   :
CCDS34 HEVDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPR
             190       200       210       220       230       240 

        240       250       260       270       280       290      
pF1KB7 SSTAISTSPLLTAPHKLQGTSGPLLLTEEEKRTLIAEGYPIPTKLPLTKAEEKALKRVRR
       . .:.:.:::::::::::: ::::.::::::::::::::::::::::.:.::::::..::
CCDS34 APSALSSSPLLTAPHKLQG-SGPLVLTEEEKRTLIAEGYPIPTKLPLSKSEEKALKKIRR
             250       260        270       280       290       300

        300       310       320       330       340       350      
pF1KB7 KIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANRTLLQQLQKLQTL
       ::::::::::::::::::.. ::::::. ..:: :: ::::.:::.::::::::::::::
CCDS34 KIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNRTLLQQLQKLQTL
              310       320       330       340       350       360

        360       370       380       390       400       410      
pF1KB7 VTNKISRPYKMAATQTGTCLMVAALCFVLVLGSLVPCLPEFSSGSQTVKEDPLAADGVYT
       : .:.::  :.:.:::::::::..:::....::.      . :... .  .  . .  ::
CCDS34 VMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYT
              370       380       390       400       410       420

        420       430       440       450       460       470      
pF1KB7 ASQMPSRSLLFYDDGAGLWEDGRSTLLPMEPPDGWEINPGGPAEQRPRDHLQHDHLDSTH
       :: . ::.::.:..                                              
CCDS34 ASVVRSRNLLIYEEHSPPEESSSPGSAGELGGWDRGSSLLRVSGLESRPDVDLPHFIISN
              430       440       450       460       470       480




519 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:21:42 2016 done: Fri Nov  4 22:21:43 2016
 Total Scan time:  4.140 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]