Result of FASTA (omim) for
pF1KB7777
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7777, 453 aa
1>>>pF1KB7777 453 - 453 aa - 453 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0003+/-0.000348; mu= 11.3685+/- 0.022
mean_var=138.7900+/-27.737, 0's: 0 Z-trim(118.1): 11 B-trim: 273 in 1/54
Lambda= 0.108867
statistics sampled from 30797 (30806) to 30797 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.361), width: 16
Scan time: 8.310
The best scores are: opt bits E(85289)
NP_061189 (OMIM: 609685) cell division cycle-assoc ( 454) 3015 485.0 1.8e-136
NP_001120842 (OMIM: 609685) cell division cycle-as ( 420) 2785 448.8 1.3e-125
NP_001120843 (OMIM: 609685) cell division cycle-as ( 408) 2367 383.2 7.1e-106
NP_114148 (OMIM: 609937,616910) cell division cycl ( 450) 832 142.1 2.9e-33
XP_011510259 (OMIM: 609937,616910) PREDICTED: cell ( 423) 829 141.6 3.8e-33
NP_665809 (OMIM: 609937,616910) cell division cycl ( 371) 739 127.4 6.2e-29
>>NP_061189 (OMIM: 609685) cell division cycle-associate (454 aa)
initn: 2672 init1: 2672 opt: 3015 Z-score: 2571.2 bits: 485.0 E(85289): 1.8e-136
Smith-Waterman score: 3015; 99.8% identity (99.8% similar) in 454 aa overlap (1-453:1-454)
10 20 30 40 50
pF1KB7 MELATRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSEESCDSFDSLESGKQ-DVRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_061 MELATRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSEESCDSFDSLESGKQQDVRF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 HSKYFTEELRRIFIEDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 HSKYFTEELRRIFIEDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 EDEEEDKATPRRSRSRRSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 EDEEEDKATPRRSRSRRSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTIL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 ERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 ERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPD
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 FFPVRTPTSASRKKTVRRAFSEGQITRRMNPTRSARPPEKFALENFTVSAAKFAEEFYSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 FFPVRTPTSASRKKTVRRAFSEGQITRRMNPTRSARPPEKFALENFTVSAAKFAEEFYSF
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 RRRKTIGGKCREYRRRHRISSFRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 RRRKTIGGKCREYRRRHRISSFRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKT
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB7 IDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 IDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDG
370 380 390 400 410 420
420 430 440 450
pF1KB7 RCATGILIHLAKFYGYDNVKEYLESLQKELVEDN
::::::::::::::::::::::::::::::::::
NP_061 RCATGILIHLAKFYGYDNVKEYLESLQKELVEDN
430 440 450
>>NP_001120842 (OMIM: 609685) cell division cycle-associ (420 aa)
initn: 2672 init1: 2672 opt: 2785 Z-score: 2376.4 bits: 448.8 E(85289): 1.3e-125
Smith-Waterman score: 2785; 99.8% identity (99.8% similar) in 420 aa overlap (35-453:1-420)
10 20 30 40 50 60
pF1KB7 TRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSEESCDSFDSLESGKQ-DVRFHSKY
::::::::::::::::::::: ::::::::
NP_001 METLSSEESCDSFDSLESGKQQDVRFHSKY
10 20 30
70 80 90 100 110 120
pF1KB7 FTEELRRIFIEDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEEEDEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTEELRRIFIEDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEEEDEE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB7 EDKATPRRSRSRRSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILERKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDKATPRRSRSRRSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILERKK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB7 DCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB7 RTPTSASRKKTVRRAFSEGQITRRMNPTRSARPPEKFALENFTVSAAKFAEEFYSFRRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTPTSASRKKTVRRAFSEGQITRRMNPTRSARPPEKFALENFTVSAAKFAEEFYSFRRRK
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB7 TIGGKCREYRRRHRISSFRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGGKCREYRRRHRISSFRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB7 TVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCAT
340 350 360 370 380 390
430 440 450
pF1KB7 GILIHLAKFYGYDNVKEYLESLQKELVEDN
::::::::::::::::::::::::::::::
NP_001 GILIHLAKFYGYDNVKEYLESLQKELVEDN
400 410 420
>>NP_001120843 (OMIM: 609685) cell division cycle-associ (408 aa)
initn: 2367 init1: 2367 opt: 2367 Z-score: 2021.8 bits: 383.2 E(85289): 7.1e-106
Smith-Waterman score: 2631; 90.1% identity (90.1% similar) in 453 aa overlap (1-453:1-408)
10 20 30 40 50 60
pF1KB7 MELATRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSEESCDSFDSLESGKQDVRFH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELATRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSEESCDSFDSLESGKQ-----
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 SKYFTEELRRIFIEDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEEE
::::::::::::::::::::
NP_001 ----------------------------------------VVESDLSDDGKASLVSEEEE
60 70
130 140 150 160 170 180
pF1KB7 DEEEDKATPRRSRSRRSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEEEDKATPRRSRSRRSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILE
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB7 RKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDF
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB7 FPVRTPTSASRKKTVRRAFSEGQITRRMNPTRSARPPEKFALENFTVSAAKFAEEFYSFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPVRTPTSASRKKTVRRAFSEGQITRRMNPTRSARPPEKFALENFTVSAAKFAEEFYSFR
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB7 RRKTIGGKCREYRRRHRISSFRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRKTIGGKCREYRRRHRISSFRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTI
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB7 DTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGR
320 330 340 350 360 370
430 440 450
pF1KB7 CATGILIHLAKFYGYDNVKEYLESLQKELVEDN
:::::::::::::::::::::::::::::::::
NP_001 CATGILIHLAKFYGYDNVKEYLESLQKELVEDN
380 390 400
>>NP_114148 (OMIM: 609937,616910) cell division cycle-as (450 aa)
initn: 983 init1: 728 opt: 832 Z-score: 718.2 bits: 142.1 E(85289): 2.9e-33
Smith-Waterman score: 1056; 43.3% identity (64.5% similar) in 453 aa overlap (33-449:26-446)
10 20 30 40 50 60
pF1KB7 LATRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSS-EESCDSFDSLESGKQDVRFHS
. ::: :: ..::::: : . .. .:.:
NP_114 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTKPKFRS
10 20 30 40 50
70 80 90 100
pF1KB7 KYFTEELRRIFIEDTDSETEDFAGFTQSDLNG---------KTNPEVM-----VVESDLS
..::: .: ::.:.:. : ::..:... : :.: . ..: :
NP_114 D-ISEELANVFYEDSDNES--FCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHAD-S
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB7 DDGKASLVSEEEEDEEEDKATPR---RSRSR-RSSIGLRVAFQFPTKKLANKPDKNSSSE
:: . :: : .. . : :.::. : : ::::..::... . .:.. :.
NP_114 DDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB7 QLFSSARLQNEKKTILERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKEN
: :.:...:..::.::: . . : ::..:::.:
NP_114 Q-------------------------PSENSVTDSNSDSEDES--GMNFLEKRALNIKQN
180 190 200
230 240 250 260 270 280
pF1KB7 KAMLAQLLAELNSMPDFFPVRTPT--SASRKKTVRRAFSEGQITRRMNPTRSARPPEKF-
:::::.:..::.:.: : : : : :... :: : .:: :: : ::: .
NP_114 KAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRR-NPERRARPLTRSR
210 220 230 240 250 260
290 300 310 320
pF1KB7 -----ALENFTVSAAKFAEEFYSFRRRKTIGGKCRE----YRRRHRISS-----FRPVED
.:. . . . .... :.:::. : : :: : : .::::.
NP_114 SRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEE
270 280 290 300 310 320
330 340 350 360 370 380
pF1KB7 ITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNR
::::.:::: . :.:::.. ::.:::::::::::::: ::: : ::::::::::::::
NP_114 ITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNR
330 340 350 360 370 380
390 400 410 420 430 440
pF1KB7 YGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCATGILIHLAKFYGYDNVKEYLESLQ
:::.::.:::::.: :::::::::::.::.::::::::.:..:::..:. ::. ::.::.
NP_114 YGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAYLKSLK
390 400 410 420 430 440
450
pF1KB7 KELVEDN
.:.
NP_114 QEFEMQA
450
>>XP_011510259 (OMIM: 609937,616910) PREDICTED: cell div (423 aa)
initn: 1025 init1: 728 opt: 829 Z-score: 716.0 bits: 141.6 E(85289): 3.8e-33
Smith-Waterman score: 1053; 43.5% identity (64.5% similar) in 451 aa overlap (35-449:1-419)
10 20 30 40 50 60
pF1KB7 TRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSS-EESCDSFDSLESGKQDVRFHSKY
::: :: ..::::: : . .. .:.:
XP_011 METSSSSDDSCDSFASDNFANTKPKFRSD-
10 20
70 80 90 100
pF1KB7 FTEELRRIFIEDTDSETEDFAGFTQSDLNG---------KTNPEVM-----VVESDLSDD
..::: .: ::.:.:. : ::..:... : :.: . ..: :::
XP_011 ISEELANVFYEDSDNES--FCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHAD-SDD
30 40 50 60 70 80
110 120 130 140 150 160
pF1KB7 GKASLVSEEEEDEEEDKATPR---RSRSR-RSSIGLRVAFQFPTKKLANKPDKNSSSEQL
. :: : .. . : :.::. : : ::::..::... . .:.. :.:
XP_011 ESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQ-
90 100 110 120 130 140
170 180 190 200 210 220
pF1KB7 FSSARLQNEKKTILERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKA
:.:...:..::.::: . . : ::..:::.:::
XP_011 ------------------------PSENSVTDSNSDSEDES--GMNFLEKRALNIKQNKA
150 160 170
230 240 250 260 270 280
pF1KB7 MLAQLLAELNSMPDFFPVRTPT--SASRKKTVRRAFSEGQITRRMNPTRSARPPEKF---
:::.:..::.:.: : : : : :... :: : .:: :: : ::: .
XP_011 MLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRR-NPERRARPLTRSRSR
180 190 200 210 220 230
290 300 310 320
pF1KB7 ---ALENFTVSAAKFAEEFYSFRRRKTIGGKCRE----YRRRHRISS-----FRPVEDIT
.:. . . . .... :.:::. : : :: : : .::::.::
XP_011 ILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEIT
240 250 260 270 280 290
330 340 350 360 370 380
pF1KB7 EEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYG
::.:::: . :.:::.. ::.:::::::::::::: ::: : ::::::::::::::::
XP_011 EEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYG
300 310 320 330 340 350
390 400 410 420 430 440
pF1KB7 EDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCATGILIHLAKFYGYDNVKEYLESLQKE
:.::.:::::.: :::::::::::.::.::::::::.:..:::..:. ::. ::.::..:
XP_011 EEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQE
360 370 380 390 400 410
450
pF1KB7 LVEDN
.
XP_011 FEMQA
420
>>NP_665809 (OMIM: 609937,616910) cell division cycle-as (371 aa)
initn: 937 init1: 728 opt: 739 Z-score: 640.4 bits: 127.4 E(85289): 6.2e-29
Smith-Waterman score: 957; 45.5% identity (67.4% similar) in 365 aa overlap (104-449:31-367)
80 90 100 110 120 130
pF1KB7 EDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEEEDEEEDKATPR-RS
:. :::. :..:.. . . ... :.
NP_665 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTRLQSVREGCRT
10 20 30 40 50 60
140 150 160 170 180 190
pF1KB7 RSR-RSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILERKKDCRQVIQR
::. : : ::::..::... . .:.. :.:
NP_665 RSQCRHSGPLRVAMKFPARSTRGATNKKAESRQ-------------------------PS
70 80 90
200 210 220 230 240
pF1KB7 EDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVRTPT--SA
:.:...:..::.::: . . : ::..:::.::::::.:..::.:.: : : : :
NP_665 ENSVTDSNSDSEDES--GMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSD
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB7 SRKKTVRRAFSEGQITRRMNPTRSARPPEKF------ALENFTVSAAKFAEEFYSFRRRK
:... :: : .:: :: : ::: . .:. . . . .... :.::
NP_665 SQSRRPRRRTFPGVASRR-NPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRK
160 170 180 190 200 210
310 320 330 340 350
pF1KB7 TIGGKCRE----YRRRHRISS-----FRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQ
:. : : :: : : .::::.::::.:::: . :.:::.. ::.::::
NP_665 TVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQ
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB7 CRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYC
:::::::::: ::: : :::::::::::::::::.::.:::::.: :::::::::::.:
NP_665 CRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFC
280 290 300 310 320 330
420 430 440 450
pF1KB7 RKRDGRCATGILIHLAKFYGYDNVKEYLESLQKELVEDN
:.::::::::.:..:::..:. ::. ::.::..:.
NP_665 RQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQEFEMQA
340 350 360 370
453 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:15:56 2016 done: Fri Nov 4 22:15:57 2016
Total Scan time: 8.310 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]