Result of FASTA (ccds) for
pF1KB7775
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7775, 453 aa
1>>>pF1KB7775 453 - 453 aa - 453 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9526+/-0.00101; mu= 14.2341+/- 0.060
mean_var=68.9540+/-13.553, 0's: 0 Z-trim(103.6): 43 B-trim: 0 in 0/51
Lambda= 0.154452
statistics sampled from 7485 (7507) to 7485 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.231), width: 16
Scan time: 2.490
The best scores are: opt bits E(32554)
CCDS9654.1 PPP2R3C gene_id:55012|Hs108|chr14 ( 453) 3005 678.9 2.8e-195
CCDS3088.1 PPP2R3A gene_id:5523|Hs108|chr3 ( 529) 432 105.6 1.3e-22
CCDS54642.1 PPP2R3A gene_id:5523|Hs108|chr3 ( 414) 427 104.4 2.2e-22
CCDS3087.1 PPP2R3A gene_id:5523|Hs108|chr3 (1150) 432 105.7 2.6e-22
CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrX ( 575) 402 98.9 1.4e-20
CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrY ( 575) 402 98.9 1.4e-20
>>CCDS9654.1 PPP2R3C gene_id:55012|Hs108|chr14 (453 aa)
initn: 3005 init1: 3005 opt: 3005 Z-score: 3619.3 bits: 678.9 E(32554): 2.8e-195
Smith-Waterman score: 3005; 100.0% identity (100.0% similar) in 453 aa overlap (1-453:1-453)
10 20 30 40 50 60
pF1KB7 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 YRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 ENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 DVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 QDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 LNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 LNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV
370 380 390 400 410 420
430 440 450
pF1KB7 TTILIDLNGFWTYENREALVANDSENSADLDDT
:::::::::::::::::::::::::::::::::
CCDS96 TTILIDLNGFWTYENREALVANDSENSADLDDT
430 440 450
>>CCDS3088.1 PPP2R3A gene_id:5523|Hs108|chr3 (529 aa)
initn: 364 init1: 199 opt: 432 Z-score: 519.6 bits: 105.6 E(32554): 1.3e-22
Smith-Waterman score: 432; 24.5% identity (59.3% similar) in 364 aa overlap (103-451:108-466)
80 90 100 110 120 130
pF1KB7 KLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGA
:.. .: : :: . .. :... :
CCDS30 NVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCG-
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB7 KCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIG--LSLYDVAGQGYLRE
: .. : .: . .. : .. ..:. . . . :. . . : . . :..
CCDS30 -CPLYWKAPMF-RAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQ
140 150 160 170 180 190
200 210 220 230 240
pF1KB7 SDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSF
:. . ... : : : :. . :.: :. :.....:. .. .::: .: .:
CCDS30 EDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNF
200 210 220 230 240 250
250 260 270 280 290 300
pF1KB7 LDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTN
:. : :..:: .: :..:: .: .. .:: ::. ..:. .::::. . ..
CCDS30 LQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSS
260 270 280 290 300 310
310 320 330 340 350 360
pF1KB7 VFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLN
...:.:. .: .:.:.: .. :... :....:....: :. .:... : :.
CCDS30 RIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLS
320 330 340 350 360 370
370 380 390 400 410 420
pF1KB7 VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTT
.. :.::.. : :. : .:. :.:. ...:.::: ::.:.:: ..
CCDS30 MYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYD
380 390 400 410 420 430
430 440 450
pF1KB7 ILIDLNGFWTYENREAL-----VANDSENSADLDDT
...:. . .:.:. . : ::. . .: :
CCDS30 TFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFED
440 450 460 470 480 490
CCDS30 YETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE
500 510 520
>>CCDS54642.1 PPP2R3A gene_id:5523|Hs108|chr3 (414 aa)
initn: 336 init1: 199 opt: 427 Z-score: 515.3 bits: 104.4 E(32554): 2.2e-22
Smith-Waterman score: 427; 24.4% identity (59.5% similar) in 353 aa overlap (114-451:4-351)
90 100 110 120 130 140
pF1KB7 QRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGAKCKQFFTAKVF
:: . .. :... : : .. : .:
CCDS54 MDIEEQKADIYEMGKIAKVCG--CPLYWKAPMF
10 20 30
150 160 170 180 190 200
pF1KB7 AKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIG--LSLYDVAGQGYLRESDLENYILELI
. .. : .. ..:. . . . :. . . : . . :.. :. . ...
CCDS54 -RAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVV
40 50 60 70 80 90
210 220 230 240 250
pF1KB7 PTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDLLELRDEE
: : : :. . :.: :. :.....:. .. .::: .: .::. : :..::
CCDS54 DTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEE
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB7 LSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECL
.: :..:: .: .. .:: ::. ..:. .::::. . .. ...:.:. .
CCDS54 --DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAV
160 170 180 190 200
320 330 340 350 360 370
pF1KB7 TY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAI
: .:.:.: .. :... :....:....: :. .:... : :... :.::..
CCDS54 TRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQ
210 220 230 240 250 260
380 390 400 410 420 430
pF1KB7 QELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTY
: :. : .:. :.:. ...:.::: ::.:.:: .. ...:. . .
CCDS54 CERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDH
270 280 290 300 310 320
440 450
pF1KB7 ENREAL-----VANDSENSADLDDT
:.:. . : ::. . .: :
CCDS54 EQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSE
330 340 350 360 370 380
>>CCDS3087.1 PPP2R3A gene_id:5523|Hs108|chr3 (1150 aa)
initn: 366 init1: 199 opt: 432 Z-score: 514.0 bits: 105.7 E(32554): 2.6e-22
Smith-Waterman score: 432; 24.5% identity (59.3% similar) in 364 aa overlap (103-451:729-1087)
80 90 100 110 120 130
pF1KB7 KLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGA
:.. .: : :: . .. :... :
CCDS30 NVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCG-
700 710 720 730 740 750
140 150 160 170 180 190
pF1KB7 KCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIG--LSLYDVAGQGYLRE
: .. : .: . .. : .. ..:. . . . :. . . : . . :..
CCDS30 -CPLYWKAPMF-RAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQ
760 770 780 790 800 810
200 210 220 230 240
pF1KB7 SDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSF
:. . ... : : : :. . :.: :. :.....:. .. .::: .: .:
CCDS30 EDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNF
820 830 840 850 860 870
250 260 270 280 290 300
pF1KB7 LDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTN
:. : :..:: .: :..:: .: .. .:: ::. ..:. .::::. . ..
CCDS30 LQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSS
880 890 900 910 920 930
310 320 330 340 350 360
pF1KB7 VFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLN
...:.:. .: .:.:.: .. :... :....:....: :. .:... : :.
CCDS30 RIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLS
940 950 960 970 980 990
370 380 390 400 410 420
pF1KB7 VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTT
.. :.::.. : :. : .:. :.:. ...:.::: ::.:.:: ..
CCDS30 MYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYD
1000 1010 1020 1030 1040 1050
430 440 450
pF1KB7 ILIDLNGFWTYENREAL-----VANDSENSADLDDT
...:. . .:.:. . : ::. . .: :
CCDS30 TFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFED
1060 1070 1080 1090 1100 1110
CCDS30 YETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE
1120 1130 1140 1150
>>CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrX (575 aa)
initn: 284 init1: 186 opt: 402 Z-score: 482.9 bits: 98.9 E(32554): 1.4e-20
Smith-Waterman score: 405; 24.3% identity (62.3% similar) in 313 aa overlap (153-452:192-501)
130 140 150 160 170
pF1KB7 FLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWL--HQTRIGL-SL
: .:. .: . ::. :. . :
CCDS14 MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVA-MWRKILQNCHDDAAKFVHL
170 180 190 200 210 220
180 190 200 210 220 230
pF1KB7 YDVAGQGYLRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGK
: .:: . :. .. ... : : :. :... :.: :. :.....:. .. .:.
CCDS14 LMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGR
230 240 250 260 270 280
240 250 260 270 280 290
pF1KB7 IKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEE
: .. :::... : :: . .: :..:: .: .. .:: ::. ... ..
CCDS14 ITCAELRRSSFLQNVALL--EEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADD
290 300 310 320 330
300 310 320 330 340 350
pF1KB7 LSRYGTATMTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFK
:.:.. .... ..::.:. .: .:...: .. :... :..: :....: :.
CCDS14 LARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFR
340 350 360 370 380 390
360 370 380 390 400 410
pF1KB7 LLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDL
.:... : :..: :.::.. . . . . . ::: ...:.:::. ::.::::
CCDS14 CMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDL
400 410 420 430 440 450
420 430 440 450
pF1KB7 INSNQGDTVTTILIDLNGFWTYENRE--ALVANDSENSADLDDT
. ... ..... . .:..: .:. . . .. .:.:
CCDS14 KRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEET
460 470 480 490 500 510
CCDS14 AGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
520 530 540 550 560 570
>>CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrY (575 aa)
initn: 284 init1: 186 opt: 402 Z-score: 482.9 bits: 98.9 E(32554): 1.4e-20
Smith-Waterman score: 405; 24.3% identity (62.3% similar) in 313 aa overlap (153-452:192-501)
130 140 150 160 170
pF1KB7 FLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWL--HQTRIGL-SL
: .:. .: . ::. :. . :
CCDS14 MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVA-MWRKILQNCHDDAAKFVHL
170 180 190 200 210 220
180 190 200 210 220 230
pF1KB7 YDVAGQGYLRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGK
: .:: . :. .. ... : : :. :... :.: :. :.....:. .. .:.
CCDS14 LMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGR
230 240 250 260 270 280
240 250 260 270 280 290
pF1KB7 IKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEE
: .. :::... : :: . .: :..:: .: .. .:: ::. ... ..
CCDS14 ITCAELRRSSFLQNVALL--EEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADD
290 300 310 320 330
300 310 320 330 340 350
pF1KB7 LSRYGTATMTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFK
:.:.. .... ..::.:. .: .:...: .. :... :..: :....: :.
CCDS14 LARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFR
340 350 360 370 380 390
360 370 380 390 400 410
pF1KB7 LLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDL
.:... : :..: :.::.. . . . . . ::: ...:.:::. ::.::::
CCDS14 CMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDL
400 410 420 430 440 450
420 430 440 450
pF1KB7 INSNQGDTVTTILIDLNGFWTYENRE--ALVANDSENSADLDDT
. ... ..... . .:..: .:. . . .. .:.:
CCDS14 KRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEET
460 470 480 490 500 510
CCDS14 AGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
520 530 540 550 560 570
453 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:14:43 2016 done: Fri Nov 4 22:14:44 2016
Total Scan time: 2.490 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]