Result of FASTA (omim) for
pF1KB7770
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7770, 477 aa
1>>>pF1KB7770 477 - 477 aa - 477 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8683+/-0.00042; mu= 15.9629+/- 0.026
mean_var=89.7328+/-18.554, 0's: 0 Z-trim(112.6): 400 B-trim: 0 in 0/53
Lambda= 0.135394
statistics sampled from 21110 (21524) to 21110 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.252), width: 16
Scan time: 8.950
The best scores are: opt bits E(85289)
XP_011532143 (OMIM: 125853,601487,601665,604367,60 ( 477) 3162 628.1 1.7e-179
NP_619725 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179
NP_619726 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179
NP_005028 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179
NP_056953 (OMIM: 125853,601487,601665,604367,60933 ( 505) 3162 628.1 1.7e-179
XP_011532144 (OMIM: 125853,601487,601665,604367,60 ( 445) 2657 529.4 7.8e-150
NP_001165290 (OMIM: 600409) peroxisome proliferato ( 402) 1724 347.1 5.2e-95
XP_006715186 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_016866462 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_011513009 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_016866460 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_016866463 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_005249250 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_016866461 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_011513011 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
NP_006229 (OMIM: 600409) peroxisome proliferator-a ( 441) 1724 347.2 5.6e-95
XP_006715183 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
XP_011513012 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95
NP_001165289 (OMIM: 600409) peroxisome proliferato ( 441) 1724 347.2 5.6e-95
XP_011528544 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
XP_005261713 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
XP_011528545 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
XP_005261712 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
XP_011528542 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
XP_011528541 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
XP_011528543 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
XP_006724333 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
NP_005027 (OMIM: 170998) peroxisome proliferator-a ( 468) 1714 345.2 2.3e-94
NP_001001928 (OMIM: 170998) peroxisome proliferato ( 468) 1714 345.2 2.3e-94
XP_006724332 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94
NP_001317544 (OMIM: 125853,601487,601665,604367,60 ( 250) 1675 337.4 2.7e-92
XP_011532146 (OMIM: 125853,601487,601665,604367,60 ( 250) 1675 337.4 2.7e-92
XP_011532145 (OMIM: 125853,601487,601665,604367,60 ( 278) 1675 337.4 3e-92
NP_803184 (OMIM: 600409) peroxisome proliferator-a ( 361) 1342 272.5 1.4e-72
XP_016866464 (OMIM: 600409) PREDICTED: peroxisome ( 365) 1342 272.5 1.4e-72
NP_001165291 (OMIM: 600409) peroxisome proliferato ( 343) 1257 255.9 1.3e-67
XP_011528547 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1220 248.6 1.9e-65
XP_016884328 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1220 248.6 1.9e-65
XP_011528546 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1220 248.6 1.9e-65
XP_016884329 (OMIM: 170998) PREDICTED: peroxisome ( 265) 1001 205.8 1.2e-52
NP_055064 (OMIM: 268100,604485,611131) photorecept ( 410) 498 107.7 6.5e-23
NP_068370 (OMIM: 602408) nuclear receptor subfamil ( 614) 468 101.9 5.2e-21
XP_006713514 (OMIM: 602304) PREDICTED: nuclear rec ( 448) 457 99.7 1.8e-20
NP_057430 (OMIM: 268100,604485,611131) photorecept ( 367) 430 94.3 5.9e-19
NP_599023 (OMIM: 600825) nuclear receptor ROR-alph ( 523) 414 91.3 6.9e-18
NP_001273031 (OMIM: 603849) nuclear receptor subfa ( 422) 405 89.5 2e-17
XP_011520177 (OMIM: 600825) PREDICTED: nuclear rec ( 504) 404 89.4 2.6e-17
NP_005051 (OMIM: 602943,616622) nuclear receptor R ( 518) 403 89.2 3e-17
XP_006711547 (OMIM: 602943,616622) PREDICTED: nucl ( 651) 403 89.2 3.6e-17
NP_001001523 (OMIM: 602943,616622) nuclear recepto ( 497) 400 88.6 4.4e-17
>>XP_011532143 (OMIM: 125853,601487,601665,604367,609338 (477 aa)
initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)
10 20 30 40 50 60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
430 440 450 460 470
>>NP_619725 (OMIM: 125853,601487,601665,604367,609338) p (477 aa)
initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)
10 20 30 40 50 60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
430 440 450 460 470
>>NP_619726 (OMIM: 125853,601487,601665,604367,609338) p (477 aa)
initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)
10 20 30 40 50 60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
430 440 450 460 470
>>NP_005028 (OMIM: 125853,601487,601665,604367,609338) p (477 aa)
initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)
10 20 30 40 50 60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
430 440 450 460 470
>>NP_056953 (OMIM: 125853,601487,601665,604367,609338) p (505 aa)
initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.3 bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:29-505)
10 20 30
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
::::::::::::::::::::::::::::::::
NP_056 MGETLGDSPIDPESDSFTDTLSANISQEMTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
430 440 450 460 470 480
460 470
pF1KB7 LQVIKKTETDMSLHPLLQEIYKDLY
:::::::::::::::::::::::::
NP_056 LQVIKKTETDMSLHPLLQEIYKDLY
490 500
>>XP_011532144 (OMIM: 125853,601487,601665,604367,609338 (445 aa)
initn: 2657 init1: 2657 opt: 2657 Z-score: 2811.0 bits: 529.4 E(85289): 7.8e-150
Smith-Waterman score: 2657; 99.7% identity (99.7% similar) in 398 aa overlap (1-398:29-426)
10 20 30
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
::::::::::::::::::::::::::::::::
XP_011 MGETLGDSPIDPESDSFTDTLSANISQEMTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
::: ::
XP_011 LSGARPRKLPPAAVSASSGHSTSVH
430 440
>>NP_001165290 (OMIM: 600409) peroxisome proliferator-ac (402 aa)
initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.7 bits: 347.1 E(85289): 5.2e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:10-402)
60 70 80 90 100 110
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
.::: .. :. . : . . .:::
NP_001 MHQRDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
10 20 30
120 130 140 150 160 170
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
NP_001 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
.:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .::
NP_001 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
:::.:::::.. .::::.:...: ..: . .:... ::.....: :: .::
NP_001 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
.:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
NP_001 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: :::
NP_001 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
NP_001 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
340 350 360 370 380 390
pF1KB7 IYKDLY
::::.:
NP_001 IYKDMY
400
>>XP_006715186 (OMIM: 600409) PREDICTED: peroxisome prol (441 aa)
initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.1 bits: 347.2 E(85289): 5.6e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441)
60 70 80 90 100 110
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
.::: .. :. . : . . .:::
XP_006 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
20 30 40 50 60 70
120 130 140 150 160 170
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
XP_006 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
80 90 100 110 120 130
180 190 200 210 220 230
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
.:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .::
XP_006 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
:::.:::::.. .::::.:...: ..: . .:... ::.....: :: .::
XP_006 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
.:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
XP_006 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: :::
XP_006 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
XP_006 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
380 390 400 410 420 430
pF1KB7 IYKDLY
::::.:
XP_006 IYKDMY
440
>>XP_016866462 (OMIM: 600409) PREDICTED: peroxisome prol (441 aa)
initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.1 bits: 347.2 E(85289): 5.6e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441)
60 70 80 90 100 110
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
.::: .. :. . : . . .:::
XP_016 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
20 30 40 50 60 70
120 130 140 150 160 170
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
XP_016 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
80 90 100 110 120 130
180 190 200 210 220 230
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
.:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .::
XP_016 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
:::.:::::.. .::::.:...: ..: . .:... ::.....: :: .::
XP_016 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
.:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
XP_016 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: :::
XP_016 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
XP_016 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
380 390 400 410 420 430
pF1KB7 IYKDLY
::::.:
XP_016 IYKDMY
440
>>XP_011513009 (OMIM: 600409) PREDICTED: peroxisome prol (441 aa)
initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.1 bits: 347.2 E(85289): 5.6e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441)
60 70 80 90 100 110
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
.::: .. :. . : . . .:::
XP_011 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
20 30 40 50 60 70
120 130 140 150 160 170
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
XP_011 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
80 90 100 110 120 130
180 190 200 210 220 230
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
.:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .::
XP_011 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
:::.:::::.. .::::.:...: ..: . .:... ::.....: :: .::
XP_011 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
.:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
XP_011 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: :::
XP_011 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
XP_011 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
380 390 400 410 420 430
pF1KB7 IYKDLY
::::.:
XP_011 IYKDMY
440
477 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:38:09 2016 done: Sat Nov 5 07:38:11 2016
Total Scan time: 8.950 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]