FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7703, 416 aa
  1>>>pF1KB7703 416 - 416 aa - 416 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.3068+/-0.000936; mu= -3.3997+/- 0.055
 mean_var=402.3571+/-90.029, 0's: 0 Z-trim(117.2): 616  B-trim: 1043 in 1/51
 Lambda= 0.063939
 statistics sampled from 17090 (17875) to 17090 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.828), E-opt: 0.2 (0.549), width:  16
 Scan time:  3.830

The best scores are:                                      opt bits E(32554)
CCDS3036.1 KLF15 gene_id:28999|Hs108|chr3          ( 416) 2950 285.8 5.2e-77


>>CCDS3036.1 KLF15 gene_id:28999|Hs108|chr3               (416 aa)
 initn: 2950 init1: 2950 opt: 2950  Z-score: 1496.1  bits: 285.8 E(32554): 5.2e-77
Smith-Waterman score: 2950; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:1-416)

               10        20        30        40        50        60
pF1KB7 MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 CSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 CLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 CLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 HLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 HLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 QAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 QAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 AGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGW
              310       320       330       340       350       360

              370       380       390       400       410      
pF1KB7 RFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN
              370       380       390       400       410      




416 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 09:11:04 2016 done: Fri Nov  4 09:11:05 2016
 Total Scan time:  3.830 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]