Result of FASTA (omim) for
pF1KB7701
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7701, 414 aa
1>>>pF1KB7701 414 - 414 aa - 414 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8989+/-0.00043; mu= 7.7715+/- 0.027
mean_var=378.2805+/-84.648, 0's: 0 Z-trim(120.9): 1519 B-trim: 0 in 0/54
Lambda= 0.065943
statistics sampled from 34687 (36689) to 34687 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.43), width: 16
Scan time: 9.160
The best scores are: opt bits E(85289)
NP_003394 (OMIM: 600013) transcriptional repressor ( 414) 2882 288.3 2.3e-77
NP_996806 (OMIM: 300570) transcription factor YY2 ( 372) 1195 127.8 4.5e-29
NP_001291287 (OMIM: 614572) zinc finger protein 42 ( 310) 942 103.6 7.2e-22
NP_777560 (OMIM: 614572) zinc finger protein 42 ho ( 310) 942 103.6 7.2e-22
XP_011529906 (OMIM: 614572) PREDICTED: zinc finger ( 310) 942 103.6 7.2e-22
XP_011529907 (OMIM: 614572) PREDICTED: zinc finger ( 310) 942 103.6 7.2e-22
XP_011529909 (OMIM: 614572) PREDICTED: zinc finger ( 310) 942 103.6 7.2e-22
XP_011529908 (OMIM: 614572) PREDICTED: zinc finger ( 310) 942 103.6 7.2e-22
XP_016866739 (OMIM: 194549) PREDICTED: zinc finger ( 561) 383 50.8 1e-05
XP_016866746 (OMIM: 194549) PREDICTED: zinc finger ( 462) 376 50.0 1.4e-05
NP_001278961 (OMIM: 194549) zinc finger protein 76 ( 515) 376 50.1 1.5e-05
XP_016866745 (OMIM: 194549) PREDICTED: zinc finger ( 515) 376 50.1 1.5e-05
XP_016866744 (OMIM: 194549) PREDICTED: zinc finger ( 517) 376 50.1 1.5e-05
XP_011513158 (OMIM: 194549) PREDICTED: zinc finger ( 519) 376 50.1 1.5e-05
XP_016866743 (OMIM: 194549) PREDICTED: zinc finger ( 524) 376 50.1 1.5e-05
XP_016866742 (OMIM: 194549) PREDICTED: zinc finger ( 524) 376 50.1 1.5e-05
XP_011513157 (OMIM: 194549) PREDICTED: zinc finger ( 526) 376 50.1 1.5e-05
XP_011513156 (OMIM: 194549) PREDICTED: zinc finger ( 526) 376 50.1 1.5e-05
XP_016866741 (OMIM: 194549) PREDICTED: zinc finger ( 527) 376 50.1 1.5e-05
XP_016866740 (OMIM: 194549) PREDICTED: zinc finger ( 536) 376 50.1 1.5e-05
XP_011526674 (OMIM: 611811) PREDICTED: zinc finger ( 434) 374 49.8 1.6e-05
XP_016866738 (OMIM: 194549) PREDICTED: zinc finger ( 570) 376 50.2 1.6e-05
NP_003418 (OMIM: 194549) zinc finger protein 76 is ( 570) 376 50.2 1.6e-05
XP_011513151 (OMIM: 194549) PREDICTED: zinc finger ( 579) 376 50.2 1.6e-05
XP_011513152 (OMIM: 194549) PREDICTED: zinc finger ( 579) 376 50.2 1.6e-05
XP_016866737 (OMIM: 194549) PREDICTED: zinc finger ( 582) 376 50.2 1.6e-05
XP_011513149 (OMIM: 194549) PREDICTED: zinc finger ( 591) 376 50.2 1.6e-05
XP_011513148 (OMIM: 194549) PREDICTED: zinc finger ( 591) 376 50.2 1.6e-05
XP_011526673 (OMIM: 611811) PREDICTED: zinc finger ( 476) 374 49.8 1.7e-05
XP_016882860 (OMIM: 611811) PREDICTED: zinc finger ( 519) 374 49.9 1.7e-05
XP_011526669 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_011526665 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_011526667 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_005260155 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_016882858 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_011526670 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_011526671 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_011526668 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_016882859 (OMIM: 611811) PREDICTED: zinc finger ( 556) 374 50.0 1.8e-05
XP_016882857 (OMIM: 611811) PREDICTED: zinc finger ( 578) 374 50.0 1.8e-05
XP_016882856 (OMIM: 611811) PREDICTED: zinc finger ( 665) 374 50.1 2e-05
NP_115809 (OMIM: 611811) zinc finger protein 333 i ( 665) 374 50.1 2e-05
XP_011526664 (OMIM: 611811) PREDICTED: zinc finger ( 665) 374 50.1 2e-05
XP_011539795 (OMIM: 600172) PREDICTED: metal regul ( 595) 362 48.9 4.1e-05
XP_011539793 (OMIM: 600172) PREDICTED: metal regul ( 753) 362 49.0 4.7e-05
NP_005946 (OMIM: 600172) metal regulatory transcri ( 753) 362 49.0 4.7e-05
NP_001311074 (OMIM: 314995) zinc finger protein 41 ( 693) 360 48.8 5.1e-05
NP_001311072 (OMIM: 314995) zinc finger protein 41 ( 693) 360 48.8 5.1e-05
NP_001311081 (OMIM: 314995) zinc finger protein 41 ( 693) 360 48.8 5.1e-05
NP_001311078 (OMIM: 314995) zinc finger protein 41 ( 693) 360 48.8 5.1e-05
>>NP_003394 (OMIM: 600013) transcriptional repressor pro (414 aa)
initn: 2882 init1: 2882 opt: 2882 Z-score: 1509.9 bits: 288.3 E(85289): 2.3e-77
Smith-Waterman score: 2882; 100.0% identity (100.0% similar) in 414 aa overlap (1-414:1-414)
10 20 30 40 50 60
pF1KB7 MASGDTLYIATDGSEMPAEIVELHEIEVETIPVETIETTVVGEEEEEDDDDEDGGGGDHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MASGDTLYIATDGSEMPAEIVELHEIEVETIPVETIETTVVGEEEEEDDDDEDGGGGDHG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GGGGHGHAGHHHHHHHHHHHPPMIALQPLVTDDPTQVHHHQEVILVQTREEVVGGDDSDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GGGGHGHAGHHHHHHHHHHHPPMIALQPLVTDDPTQVHHHQEVILVQTREEVVGGDDSDG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGKSGGGGSSSSGGGRVKKGGGKKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGKSGGGGSSSSGGGRVKKGGGKKS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 GKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDEKKDIDHETVVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDEKKDIDHETVVEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 QIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDAPRTIACPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDAPRTIACPH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC
310 320 330 340 350 360
370 380 390 400 410
pF1KB7 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
370 380 390 400 410
>>NP_996806 (OMIM: 300570) transcription factor YY2 [Hom (372 aa)
initn: 1137 init1: 769 opt: 1195 Z-score: 643.0 bits: 127.8 E(85289): 4.5e-29
Smith-Waterman score: 1432; 56.4% identity (76.5% similar) in 413 aa overlap (1-413:1-371)
10 20 30 40 50 60
pF1KB7 MASGDTLYIATDGSEMPAEIVELHEIEVETIPVETIETTVVGEEEEEDDDDEDGGGGDHG
:::.. . :. : :.::.:::::.:.:: .:.: : : : . :: : :. .:
NP_996 MASNEDFSITQD-LEIPADIVELHDINVEPLPMEDIPTESV---QYEDVD----GNWIYG
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 GGGGHGHAGHHHHHHHHHHHPPMIALQPLVTDDPTQVHHHQEVILVQTREEVVGGDDSDG
: :.:::...:::: :. : ::....::.::::: :::.
NP_996 G----------------HNHPPLMVLQPLFTNTGYG-DHDQEMLMLQTQEEVVGYCDSDN
60 70 80 90
130 140 150 160 170 180
pF1KB7 LRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGKSGGGGSSSSGGGRVKKGGGKKS
..: .:::. .: .:.....::....:.. : .:.: .: :: . : :
NP_996 QLGND-LEDQLALPDSI----EDEHFQMTLASLSASAAS----TSTSTQSRSKKPSKKPS
100 110 120 130 140
190 200 210 220 230 240
pF1KB7 GKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDEKKDIDHETVVEE
:: : : :. ::.... :..::::::.:.::::::::::::: ....: . .: :
NP_996 GK-SATSTEANPAGSSSSL-GTRKWEQKQMQVKTLEGEFSVTMWSPNDNND--QGAVGEG
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB7 QIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDAPRTIACPH
: .:: :::::::. ::::::::.::::::::::::::...::.. : . :.:. : .
NP_996 Q--AEN-PPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSK-GEPPKTVPCSY
210 220 230 240 250
310 320 330 340 350 360
pF1KB7 KGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC
.:: ::::: .::::::: :::::::::::::::.:::::.:::::::::::::::::::
NP_996 SGCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGC
260 270 280 290 300 310
370 380 390 400 410
pF1KB7 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
:::::::::::::.::::::.:.::::: ::.:::::::::.:::::.:.:::
NP_996 GKRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
320 330 340 350 360 370
>>NP_001291287 (OMIM: 614572) zinc finger protein 42 hom (310 aa)
initn: 1169 init1: 904 opt: 942 Z-score: 513.6 bits: 103.6 E(85289): 7.2e-22
Smith-Waterman score: 942; 65.9% identity (84.1% similar) in 214 aa overlap (203-414:99-306)
180 190 200 210 220 230
pF1KB7 KKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDE--KK
:: ..:.. :..:. .. : : ::
NP_001 SDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEAS---SLECSLEYMKK
70 80 90 100 110 120
240 250 260 270 280 290
pF1KB7 DIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKED
. .: . ..:.:::: .::::::::::::::::::::::::::::::: :: ::
NP_001 GVKKE--LPQKIVGENSL-EYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEY
130 140 150 160 170 180
300 310 320 330 340 350
pF1KB7 DAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE
:. .::::..:::. .:. .:.:::: :::: ::::::::::::::::::: ::::::
NP_001 DSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGE
190 200 210 220 230 240
360 370 380 390 400 410
pF1KB7 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA
:::.:::::::::::::::::::::::::.. .::::.:::..: ::.:::.::::::..
NP_001 KPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANT
250 260 270 280 290 300
pF1KB7 KNNQ
..:.
NP_001 NKNEQEGK
310
>>NP_777560 (OMIM: 614572) zinc finger protein 42 homolo (310 aa)
initn: 1169 init1: 904 opt: 942 Z-score: 513.6 bits: 103.6 E(85289): 7.2e-22
Smith-Waterman score: 942; 65.9% identity (84.1% similar) in 214 aa overlap (203-414:99-306)
180 190 200 210 220 230
pF1KB7 KKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDE--KK
:: ..:.. :..:. .. : : ::
NP_777 SDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEAS---SLECSLEYMKK
70 80 90 100 110 120
240 250 260 270 280 290
pF1KB7 DIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKED
. .: . ..:.:::: .::::::::::::::::::::::::::::::: :: ::
NP_777 GVKKE--LPQKIVGENSL-EYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEY
130 140 150 160 170 180
300 310 320 330 340 350
pF1KB7 DAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE
:. .::::..:::. .:. .:.:::: :::: ::::::::::::::::::: ::::::
NP_777 DSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGE
190 200 210 220 230 240
360 370 380 390 400 410
pF1KB7 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA
:::.:::::::::::::::::::::::::.. .::::.:::..: ::.:::.::::::..
NP_777 KPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANT
250 260 270 280 290 300
pF1KB7 KNNQ
..:.
NP_777 NKNEQEGK
310
>>XP_011529906 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1169 init1: 904 opt: 942 Z-score: 513.6 bits: 103.6 E(85289): 7.2e-22
Smith-Waterman score: 942; 65.9% identity (84.1% similar) in 214 aa overlap (203-414:99-306)
180 190 200 210 220 230
pF1KB7 KKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDE--KK
:: ..:.. :..:. .. : : ::
XP_011 SDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEAS---SLECSLEYMKK
70 80 90 100 110 120
240 250 260 270 280 290
pF1KB7 DIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKED
. .: . ..:.:::: .::::::::::::::::::::::::::::::: :: ::
XP_011 GVKKE--LPQKIVGENSL-EYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEY
130 140 150 160 170 180
300 310 320 330 340 350
pF1KB7 DAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE
:. .::::..:::. .:. .:.:::: :::: ::::::::::::::::::: ::::::
XP_011 DSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGE
190 200 210 220 230 240
360 370 380 390 400 410
pF1KB7 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA
:::.:::::::::::::::::::::::::.. .::::.:::..: ::.:::.::::::..
XP_011 KPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANT
250 260 270 280 290 300
pF1KB7 KNNQ
..:.
XP_011 NKNEQEGK
310
>>XP_011529907 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1169 init1: 904 opt: 942 Z-score: 513.6 bits: 103.6 E(85289): 7.2e-22
Smith-Waterman score: 942; 65.9% identity (84.1% similar) in 214 aa overlap (203-414:99-306)
180 190 200 210 220 230
pF1KB7 KKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDE--KK
:: ..:.. :..:. .. : : ::
XP_011 SDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEAS---SLECSLEYMKK
70 80 90 100 110 120
240 250 260 270 280 290
pF1KB7 DIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKED
. .: . ..:.:::: .::::::::::::::::::::::::::::::: :: ::
XP_011 GVKKE--LPQKIVGENSL-EYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEY
130 140 150 160 170 180
300 310 320 330 340 350
pF1KB7 DAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE
:. .::::..:::. .:. .:.:::: :::: ::::::::::::::::::: ::::::
XP_011 DSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGE
190 200 210 220 230 240
360 370 380 390 400 410
pF1KB7 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA
:::.:::::::::::::::::::::::::.. .::::.:::..: ::.:::.::::::..
XP_011 KPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANT
250 260 270 280 290 300
pF1KB7 KNNQ
..:.
XP_011 NKNEQEGK
310
>>XP_011529909 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1169 init1: 904 opt: 942 Z-score: 513.6 bits: 103.6 E(85289): 7.2e-22
Smith-Waterman score: 942; 65.9% identity (84.1% similar) in 214 aa overlap (203-414:99-306)
180 190 200 210 220 230
pF1KB7 KKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDE--KK
:: ..:.. :..:. .. : : ::
XP_011 SDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEAS---SLECSLEYMKK
70 80 90 100 110 120
240 250 260 270 280 290
pF1KB7 DIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKED
. .: . ..:.:::: .::::::::::::::::::::::::::::::: :: ::
XP_011 GVKKE--LPQKIVGENSL-EYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEY
130 140 150 160 170 180
300 310 320 330 340 350
pF1KB7 DAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE
:. .::::..:::. .:. .:.:::: :::: ::::::::::::::::::: ::::::
XP_011 DSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGE
190 200 210 220 230 240
360 370 380 390 400 410
pF1KB7 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA
:::.:::::::::::::::::::::::::.. .::::.:::..: ::.:::.::::::..
XP_011 KPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANT
250 260 270 280 290 300
pF1KB7 KNNQ
..:.
XP_011 NKNEQEGK
310
>>XP_011529908 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1169 init1: 904 opt: 942 Z-score: 513.6 bits: 103.6 E(85289): 7.2e-22
Smith-Waterman score: 942; 65.9% identity (84.1% similar) in 214 aa overlap (203-414:99-306)
180 190 200 210 220 230
pF1KB7 KKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDE--KK
:: ..:.. :..:. .. : : ::
XP_011 SDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEAS---SLECSLEYMKK
70 80 90 100 110 120
240 250 260 270 280 290
pF1KB7 DIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKED
. .: . ..:.:::: .::::::::::::::::::::::::::::::: :: ::
XP_011 GVKKE--LPQKIVGENSL-EYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEY
130 140 150 160 170 180
300 310 320 330 340 350
pF1KB7 DAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE
:. .::::..:::. .:. .:.:::: :::: ::::::::::::::::::: ::::::
XP_011 DSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGE
190 200 210 220 230 240
360 370 380 390 400 410
pF1KB7 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA
:::.:::::::::::::::::::::::::.. .::::.:::..: ::.:::.::::::..
XP_011 KPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANT
250 260 270 280 290 300
pF1KB7 KNNQ
..:.
XP_011 NKNEQEGK
310
>>XP_016866739 (OMIM: 194549) PREDICTED: zinc finger pro (561 aa)
initn: 873 init1: 317 opt: 383 Z-score: 223.8 bits: 50.8 E(85289): 1e-05
Smith-Waterman score: 383; 40.9% identity (66.7% similar) in 132 aa overlap (284-411:164-295)
260 270 280 290 300 310
pF1KB7 YMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIK-EDDAPRTIACPHKGCTKMFRDNSA
::. : .. . :.. : .::: ...
XP_016 MMRASVQTQWWPWSSMPARLFPQVLHDSQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHH
140 150 160 170 180 190
320 330 340 350 360
pF1KB7 MRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN
.. : ..: : : . : :::::. . :: : .::::.:::: :::::. :. .
XP_016 LKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGERPFQCPFEGCGRSFTTSNI
200 210 220 230 240 250
370 380 390 400 410
pF1KB7 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
..::: :::.:::.:: :.. :...:: :.:. :. :
XP_016 RKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSS
260 270 280 290 300 310
XP_016 LYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAAS
320 330 340 350 360 370
>>XP_016866746 (OMIM: 194549) PREDICTED: zinc finger pro (462 aa)
initn: 845 init1: 301 opt: 376 Z-score: 221.0 bits: 50.0 E(85289): 1.4e-05
Smith-Waterman score: 376; 42.1% identity (67.8% similar) in 121 aa overlap (294-411:140-260)
270 280 290 300 310 320
pF1KB7 GIPGIDLSDPKQLAEFARMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTH-GP
: : .: : : . ....:..:: :
XP_016 RAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGE
110 120 130 140 150 160
330 340 350 360 370 380
pF1KB7 RVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD
. . : : :.::: :. :..: .::::.:::: :::::. :. . ..::: :::.
XP_016 KPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHTGE
170 180 190 200 210 220
390 400 410
pF1KB7 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
:::.:: :.. :...:: :.:. :. :
XP_016 RPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHC
230 240 250 260 270 280
XP_016 KPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAASAAEESPPPKRP
290 300 310 320 330 340
414 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:04:10 2016 done: Fri Nov 4 22:04:12 2016
Total Scan time: 9.160 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]