Result of FASTA (nr) for
pF1KB7689
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7689, 349 aa
1>>>pF1KB7689 349 - 349 aa - 349 aa
Library: nr
8900870272 residues in 25779625 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9235+/-0.000171; mu= 7.9916+/- 0.009
mean_var=75.8959+/-14.325, 0's: 41 Z-trim(121.7): 69 B-trim: 29 in 1/63
Lambda= 0.147219
statistics sampled from 60000 (144581) to 7582647 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.676), E-opt: 0.2 (0.294), width: 16
Scan time: 674.730
The best scores are: opt bits E(25779625)
gi|153082752|ref|NP_002190.2| interferon regulator ( 349) 2346 507.5 5.5e-141
gi|397505962|ref|XP_003823507.1| PREDICTED: interf ( 349) 2345 507.2 6.3e-141
gi|114597071|ref|XP_517553.2| PREDICTED: interfero ( 349) 2341 506.4 1.1e-140
gi|209447038|ref|NP_001129265.1| interferon regula ( 349) 2341 506.4 1.1e-140
gi|332244715|ref|XP_003271519.1| PREDICTED: interf ( 349) 2335 505.1 2.8e-140
gi|355749696|gb|EHH54095.1| hypothetical protein E ( 349) 2330 504.1 5.8e-140
gi|33967|emb|CAA34073.1| unnamed protein product [ ( 349) 2328 503.6 7.7e-140
gi|197100053|ref|NP_001127478.1| interferon regula ( 349) 2319 501.7 2.9e-139
gi|403285142|ref|XP_003933897.1| PREDICTED: interf ( 349) 2269 491.1 4.6e-136
gi|149742692|ref|XP_001491848.1| PREDICTED: interf ( 349) 2267 490.7 6.1e-136
gi|296195080|ref|XP_002745228.1| PREDICTED: interf ( 349) 2265 490.3 8.2e-136
gi|478509024|ref|XP_004428792.1| PREDICTED: interf ( 349) 2257 488.6 2.7e-135
gi|466067931|ref|XP_004281785.1| PREDICTED: interf ( 349) 2252 487.5 5.6e-135
gi|410955995|ref|XP_003984631.1| PREDICTED: interf ( 349) 2252 487.5 5.6e-135
gi|350593349|ref|XP_003359517.2| PREDICTED: interf ( 349) 2249 486.9 8.7e-135
gi|350593353|ref|XP_003483663.1| PREDICTED: interf ( 364) 2249 486.9 9.1e-135
gi|350593351|ref|XP_003483662.1| PREDICTED: interf ( 386) 2249 486.9 9.6e-135
gi|472386867|ref|XP_004412782.1| PREDICTED: interf ( 349) 2247 486.4 1.2e-134
gi|73979502|ref|XP_848907.1| PREDICTED: interferon ( 349) 2243 485.6 2.1e-134
gi|431902327|gb|ELK08828.1| Interferon regulatory ( 349) 2237 484.3 5.1e-134
gi|354466110|ref|XP_003495518.1| PREDICTED: interf ( 349) 2233 483.5 9.2e-134
gi|281354636|gb|EFB30220.1| hypothetical protein P ( 347) 2227 482.2 2.2e-133
gi|13879220|gb|AAH06577.1| Interferon regulatory f ( 349) 2209 478.4 3.1e-132
gi|30580432|sp|Q8R4E0.1|IRF2_SIGHI RecName: Full=I ( 349) 2207 477.9 4.2e-132
gi|162287051|ref|NP_032417.3| interferon regulator ( 349) 2205 477.5 5.6e-132
gi|83404939|gb|AAI10667.1| Interferon regulatory f ( 349) 2204 477.3 6.5e-132
gi|471416406|ref|XP_004389726.1| PREDICTED: interf ( 349) 2203 477.1 7.6e-132
gi|57619225|ref|NP_001009740.1| interferon regulat ( 349) 2192 474.7 3.8e-131
gi|329665054|ref|NP_001192722.1| interferon regula ( 349) 2191 474.5 4.4e-131
gi|440899727|gb|ELR50990.1| Interferon regulatory ( 349) 2190 474.3 5.1e-131
gi|114052899|ref|NP_001040551.1| interferon regula ( 349) 2190 474.3 5.1e-131
gi|351715655|gb|EHB18574.1| Interferon regulatory ( 346) 2188 473.9 6.8e-131
gi|348566735|ref|XP_003469157.1| PREDICTED: interf ( 349) 2186 473.5 9.3e-131
gi|395542320|ref|XP_003773081.1| PREDICTED: interf ( 349) 2175 471.1 4.7e-130
gi|291385983|ref|XP_002709539.1| PREDICTED: interf ( 346) 2168 469.7 1.3e-129
gi|395839952|ref|XP_003792835.1| PREDICTED: interf ( 349) 2164 468.8 2.4e-129
gi|126331188|ref|XP_001363882.1| PREDICTED: interf ( 347) 2144 464.6 4.5e-128
gi|402870944|ref|XP_003899453.1| PREDICTED: interf ( 469) 2138 463.3 1.5e-127
gi|488593148|ref|XP_004481805.1| PREDICTED: interf ( 345) 2117 458.8 2.4e-126
gi|488593146|ref|XP_004481804.1| PREDICTED: interf ( 357) 2117 458.8 2.4e-126
gi|449269866|gb|EMC80606.1| Interferon regulatory ( 348) 1987 431.2 4.9e-118
gi|45383952|ref|NP_990527.1| interferon regulatory ( 348) 1976 428.9 2.5e-117
gi|326918562|ref|XP_003205557.1| PREDICTED: interf ( 348) 1976 428.9 2.5e-117
gi|483496040|gb|EOA93628.1| Interferon regulatory ( 348) 1969 427.4 6.9e-117
gi|465999188|gb|EMP40858.1| Interferon regulatory ( 390) 1965 426.5 1.4e-116
gi|432089696|gb|ELK23516.1| Interferon regulatory ( 501) 1954 424.2 9.1e-116
gi|224049787|ref|XP_002191178.1| PREDICTED: interf ( 348) 1946 422.5 2e-115
gi|327273779|ref|XP_003221657.1| PREDICTED: interf ( 350) 1790 389.4 1.9e-105
gi|302201772|gb|ADL09139.1| interferon regulatory ( 325) 1649 359.4 1.9e-96
gi|51895489|gb|AAU13783.1| interferon regulatory f ( 248) 1643 358.2 3.4e-96
>>gi|153082752|ref|NP_002190.2| interferon regulatory fa (349 aa)
initn: 2346 init1: 2346 opt: 2346 Z-score: 2696.7 bits: 507.5 E(25779625): 5.5e-141
Smith-Waterman score: 2346; 100.0% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|153 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|153 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|153 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|153 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|153 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|153 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|397505962|ref|XP_003823507.1| PREDICTED: interferon (349 aa)
initn: 2345 init1: 2345 opt: 2345 Z-score: 2695.6 bits: 507.2 E(25779625): 6.3e-141
Smith-Waterman score: 2345; 99.7% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|397 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|397 HTGKHQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|397 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|397 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|397 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|397 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|114597071|ref|XP_517553.2| PREDICTED: interferon re (349 aa)
initn: 2341 init1: 2341 opt: 2341 Z-score: 2691.0 bits: 506.4 E(25779625): 1.1e-140
Smith-Waterman score: 2341; 99.4% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|114 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFKNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 HTGKHQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|209447038|ref|NP_001129265.1| interferon regulatory (349 aa)
initn: 2341 init1: 2341 opt: 2341 Z-score: 2691.0 bits: 506.4 E(25779625): 1.1e-140
Smith-Waterman score: 2341; 99.7% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 SHLDSNIEDQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|332244715|ref|XP_003271519.1| PREDICTED: interferon (349 aa)
initn: 2335 init1: 2335 opt: 2335 Z-score: 2684.1 bits: 505.1 E(25779625): 2.8e-140
Smith-Waterman score: 2335; 99.4% identity (99.7% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 SHLDSNIEDQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
:::::::::::::::::::: ::::::::::::::::::::::::::::
gi|332 YNSSWPPFQDLPLSSSMTPAPSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|355749696|gb|EHH54095.1| hypothetical protein EGM_1 (349 aa)
initn: 2330 init1: 2330 opt: 2330 Z-score: 2678.4 bits: 504.1 E(25779625): 5.8e-140
Smith-Waterman score: 2330; 99.4% identity (99.7% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|355 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|355 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|355 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPECAVLTSTIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|355 SHLDSNIEDQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|355 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|355 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|33967|emb|CAA34073.1| unnamed protein product [Homo (349 aa)
initn: 2328 init1: 2328 opt: 2328 Z-score: 2676.1 bits: 503.6 E(25779625): 7.7e-140
Smith-Waterman score: 2328; 99.7% identity (99.7% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
gi|339 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNRAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|339 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|339 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|339 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|339 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|339 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|197100053|ref|NP_001127478.1| interferon regulatory (349 aa)
initn: 2319 init1: 2319 opt: 2319 Z-score: 2665.7 bits: 501.7 E(25779625): 2.9e-139
Smith-Waterman score: 2319; 98.6% identity (99.7% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
gi|197 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSAIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 SHLDSNIEDQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
::::::::::::: ::.::::::::::::.:::::::::::::::::::
gi|197 YNSSWPPFQDLPLPSSVTPASSSSRPDREARASVIKKTSDITQARVKSC
310 320 330 340
>>gi|403285142|ref|XP_003933897.1| PREDICTED: interferon (349 aa)
initn: 2269 init1: 2269 opt: 2269 Z-score: 2608.3 bits: 491.1 E(25779625): 4.6e-136
Smith-Waterman score: 2269; 96.3% identity (98.6% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|403 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|403 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
:::::::::::.:::::::::::::::::::::::::::::.:.::::::::::::::::
gi|403 KGKKPKTEKEDRVKHIKQEPVESSLGLSNGVSDLSPEYAVLASAIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::.::::::::::::::::::::::::.::::::::::::::::::::::::::
gi|403 SHLDSNIEDQEIVTNPPDICQVVEVTTESDEQPASMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
::::::::::::::::::::::::::: :: : ::::::::::.:::::::::.:: :::
gi|403 SDEESAEGRPHWRKRNIEGKQYLSNMGIRGPYQLPGMASFVTSSKPDLQVTIKDESRPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
::::::::::::::::.: ::::::::::::::::::::::::::::::
gi|403 YNSSWPPFQDLPLSSSVTQASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
>>gi|149742692|ref|XP_001491848.1| PREDICTED: interferon (349 aa)
initn: 2267 init1: 2267 opt: 2267 Z-score: 2606.0 bits: 490.7 E(25779625): 6.1e-136
Smith-Waterman score: 2267; 95.7% identity (99.1% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|149 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRMLPLSERPSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
:::::::::::.:::::::::::::::::::::::::::::::.::::::::::::::::
gi|149 KGKKPKTEKEDRVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSAIKNEVDSTVNIIVVGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 SHLDSNIEDQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
:::::.:::::::::::::::::::::::..::::.::.::::::::::::::::: :::
gi|149 SDEESTEGRPHWRKRNIEGKQYLSNMGTRSTYLLPSMATFVTSNKPDLQVTIKEESCPVP
250 260 270 280 290 300
310 320 330 340
pF1KB7 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
.::::::: ::::. :.::::::::::::::::::::::::::::::::
gi|149 FNSSWPPFPDLPLTPSVTPASSSSRPDRETRASVIKKTSDITQARVKSC
310 320 330 340
349 residues in 1 query sequences
8900870272 residues in 25779625 library sequences
Tcomplib [36.3.4 Apr, 2011] (6 proc)
start: Sat May 25 01:09:16 2013 done: Sat May 25 01:11:02 2013
Total Scan time: 674.730 Total Display time: -1.240
Function used was FASTA [36.3.4 Apr, 2011]