Result of FASTA (omim) for
pF1KB7688
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7688, 410 aa
1>>>pF1KB7688 410 - 410 aa - 410 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2248+/-0.000308; mu= 14.3922+/- 0.020
mean_var=108.5432+/-21.825, 0's: 0 Z-trim(118.5): 54 B-trim: 48 in 1/60
Lambda= 0.123104
statistics sampled from 31490 (31544) to 31490 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.37), width: 16
Scan time: 9.410
The best scores are: opt bits E(85289)
NP_009042 (OMIM: 189902) transcription factor Dp-1 ( 410) 2680 486.4 5.5e-137
XP_005268384 (OMIM: 189902) PREDICTED: transcripti ( 410) 2680 486.4 5.5e-137
XP_016876207 (OMIM: 189902) PREDICTED: transcripti ( 406) 2637 478.8 1.1e-134
XP_005268385 (OMIM: 189902) PREDICTED: transcripti ( 406) 2637 478.8 1.1e-134
XP_011535820 (OMIM: 189902) PREDICTED: transcripti ( 382) 2202 401.5 1.9e-111
XP_016876206 (OMIM: 189902) PREDICTED: transcripti ( 476) 2202 401.5 2.2e-111
XP_016876208 (OMIM: 189902) PREDICTED: transcripti ( 337) 2196 400.4 3.5e-111
XP_016876210 (OMIM: 189902) PREDICTED: transcripti ( 315) 2007 366.8 4.3e-101
XP_016876209 (OMIM: 189902) PREDICTED: transcripti ( 315) 2007 366.8 4.3e-101
XP_005268388 (OMIM: 189902) PREDICTED: transcripti ( 311) 1964 359.1 8.4e-99
NP_057605 (OMIM: 300772) transcription factor Dp f ( 405) 1894 346.8 5.7e-95
XP_011535821 (OMIM: 189902) PREDICTED: transcripti ( 381) 1529 281.9 1.8e-75
XP_011535822 (OMIM: 189902) PREDICTED: transcripti ( 381) 1529 281.9 1.8e-75
XP_016876211 (OMIM: 189902) PREDICTED: transcripti ( 242) 1523 280.7 2.6e-75
XP_005247788 (OMIM: 602160) PREDICTED: transcripti ( 447) 1353 250.7 5.2e-66
NP_001171610 (OMIM: 602160) transcription factor D ( 446) 1351 250.4 6.6e-66
XP_016862580 (OMIM: 602160) PREDICTED: transcripti ( 446) 1351 250.4 6.6e-66
XP_016862587 (OMIM: 602160) PREDICTED: transcripti ( 386) 1336 247.7 3.7e-65
NP_001171609 (OMIM: 602160) transcription factor D ( 386) 1336 247.7 3.7e-65
NP_006277 (OMIM: 602160) transcription factor Dp-2 ( 386) 1336 247.7 3.7e-65
XP_016862585 (OMIM: 602160) PREDICTED: transcripti ( 386) 1336 247.7 3.7e-65
XP_016862582 (OMIM: 602160) PREDICTED: transcripti ( 425) 1336 247.7 4e-65
XP_011511404 (OMIM: 602160) PREDICTED: transcripti ( 425) 1336 247.7 4e-65
XP_011511403 (OMIM: 602160) PREDICTED: transcripti ( 425) 1336 247.7 4e-65
XP_016862583 (OMIM: 602160) PREDICTED: transcripti ( 425) 1336 247.7 4e-65
XP_016862584 (OMIM: 602160) PREDICTED: transcripti ( 425) 1336 247.7 4e-65
XP_016862581 (OMIM: 602160) PREDICTED: transcripti ( 425) 1336 247.7 4e-65
XP_016862586 (OMIM: 602160) PREDICTED: transcripti ( 385) 1334 247.3 4.8e-65
XP_016862588 (OMIM: 602160) PREDICTED: transcripti ( 385) 1334 247.3 4.8e-65
NP_001171611 (OMIM: 602160) transcription factor D ( 418) 1334 247.3 5.1e-65
XP_011511409 (OMIM: 602160) PREDICTED: transcripti ( 360) 1333 247.1 5.1e-65
XP_011511408 (OMIM: 602160) PREDICTED: transcripti ( 424) 1334 247.4 5.1e-65
XP_016862589 (OMIM: 602160) PREDICTED: transcripti ( 359) 1331 246.8 6.5e-65
NP_001171612 (OMIM: 602160) transcription factor D ( 349) 1320 244.8 2.5e-64
XP_011511411 (OMIM: 602160) PREDICTED: transcripti ( 334) 1313 243.5 5.7e-64
XP_011511410 (OMIM: 602160) PREDICTED: transcripti ( 334) 1313 243.5 5.7e-64
XP_016862590 (OMIM: 602160) PREDICTED: transcripti ( 334) 1313 243.5 5.7e-64
XP_016862591 (OMIM: 602160) PREDICTED: transcripti ( 333) 1311 243.2 7.2e-64
XP_011511413 (OMIM: 602160) PREDICTED: transcripti ( 333) 1311 243.2 7.2e-64
XP_016862593 (OMIM: 602160) PREDICTED: transcripti ( 247) 1293 239.9 5.3e-63
XP_016862594 (OMIM: 602160) PREDICTED: transcripti ( 246) 1291 239.5 6.7e-63
NP_001171613 (OMIM: 602160) transcription factor D ( 310) 1208 224.9 2.2e-58
XP_016862592 (OMIM: 602160) PREDICTED: transcripti ( 322) 671 129.5 1.2e-29
>>NP_009042 (OMIM: 189902) transcription factor Dp-1 [Ho (410 aa)
initn: 2680 init1: 2680 opt: 2680 Z-score: 2580.4 bits: 486.4 E(85289): 5.5e-137
Smith-Waterman score: 2680; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KB7 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
310 320 330 340 350 360
370 380 390 400 410
pF1KB7 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
370 380 390 400 410
>>XP_005268384 (OMIM: 189902) PREDICTED: transcription f (410 aa)
initn: 2680 init1: 2680 opt: 2680 Z-score: 2580.4 bits: 486.4 E(85289): 5.5e-137
Smith-Waterman score: 2680; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KB7 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
310 320 330 340 350 360
370 380 390 400 410
pF1KB7 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
370 380 390 400 410
>>XP_016876207 (OMIM: 189902) PREDICTED: transcription f (406 aa)
initn: 2641 init1: 2331 opt: 2637 Z-score: 2539.2 bits: 478.8 E(85289): 1.1e-134
Smith-Waterman score: 2637; 99.0% identity (99.0% similar) in 410 aa overlap (1-410:1-406)
10 20 30 40 50 60
pF1KB7 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGT---
310 320 330 340 350
370 380 390 400 410
pF1KB7 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 -SDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
360 370 380 390 400
>>XP_005268385 (OMIM: 189902) PREDICTED: transcription f (406 aa)
initn: 2641 init1: 2331 opt: 2637 Z-score: 2539.2 bits: 478.8 E(85289): 1.1e-134
Smith-Waterman score: 2637; 99.0% identity (99.0% similar) in 410 aa overlap (1-410:1-406)
10 20 30 40 50 60
pF1KB7 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGT---
310 320 330 340 350
370 380 390 400 410
pF1KB7 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 -SDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
360 370 380 390 400
>>XP_011535820 (OMIM: 189902) PREDICTED: transcription f (382 aa)
initn: 2202 init1: 2202 opt: 2202 Z-score: 2122.0 bits: 401.5 E(85289): 1.9e-111
Smith-Waterman score: 2202; 100.0% identity (100.0% similar) in 336 aa overlap (1-336:1-336)
10 20 30 40 50 60
pF1KB7 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
::::::::::::::::::::::::::::::::::::
XP_011 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEKTGLCDCTAGCPAPWRSVENTGQA
310 320 330 340 350 360
370 380 390 400 410
pF1KB7 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
XP_011 KDIRKLLQPSVLWNCASFCWLP
370 380
>>XP_016876206 (OMIM: 189902) PREDICTED: transcription f (476 aa)
initn: 2202 init1: 2202 opt: 2202 Z-score: 2120.7 bits: 401.5 E(85289): 2.2e-111
Smith-Waterman score: 2305; 85.1% identity (85.1% similar) in 442 aa overlap (1-376:1-442)
10 20 30 40 50 60
pF1KB7 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
310 320 330
pF1KB7 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTE------------------------
::::::::::::::::::::::::::::::::::::
XP_016 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEKTGLCDCTAGCPAPWRSVENTGQA
310 320 330 340 350 360
340 350
pF1KB7 ------------------------------------------MAQGTVGGVFITTAGSTS
::::::::::::::::::
XP_016 KDIRKLLQPSVLWNCASFCWLPVRLVLFLFHDHSLIFFPFSEMAQGTVGGVFITTAGSTS
370 380 390 400 410 420
360 370 380 390 400 410
pF1KB7 NGTRFSASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
::::::::::::::::::::::
XP_016 NGTRFSASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
430 440 450 460 470
>--
initn: 233 init1: 233 opt: 233 Z-score: 230.7 bits: 51.9 E(85289): 4.1e-06
Smith-Waterman score: 233; 100.0% identity (100.0% similar) in 34 aa overlap (377-410:443-476)
350 360 370 380 390 400
pF1KB7 ITTAGSTSNGTRFSASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNEN
::::::::::::::::::::::::::::::
XP_016 ITTAGSTSNGTRFSASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNEN
420 430 440 450 460 470
410
pF1KB7 DEDD
::::
XP_016 DEDD
>>XP_016876208 (OMIM: 189902) PREDICTED: transcription f (337 aa)
initn: 2196 init1: 2196 opt: 2196 Z-score: 2117.0 bits: 400.4 E(85289): 3.5e-111
Smith-Waterman score: 2196; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335)
10 20 30 40 50 60
pF1KB7 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
:::::::::::::::::::::::::::::::::::
XP_016 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTVT
310 320 330
370 380 390 400 410
pF1KB7 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
>>XP_016876210 (OMIM: 189902) PREDICTED: transcription f (315 aa)
initn: 2005 init1: 2005 opt: 2007 Z-score: 1936.0 bits: 366.8 E(85289): 4.3e-101
Smith-Waterman score: 2007; 98.7% identity (98.7% similar) in 313 aa overlap (98-410:6-315)
70 80 90 100 110 120
pF1KB7 QRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFSMKVCEKV
: : ::::::::::::::::::::::::
XP_016 MSTLPSKW---KRNRKGEKNGKGLRHFSMKVCEKV
10 20 30
130 140 150 160 170 180
pF1KB7 QRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 EIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQA
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB7 SRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMAC
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB7 GLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFSASDLTNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFSASDLTNG
220 230 240 250 260 270
370 380 390 400 410
pF1KB7 ADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
:::::::::::::::::::::::::::::::::::::::::::
XP_016 ADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
280 290 300 310
>>XP_016876209 (OMIM: 189902) PREDICTED: transcription f (315 aa)
initn: 2005 init1: 2005 opt: 2007 Z-score: 1936.0 bits: 366.8 E(85289): 4.3e-101
Smith-Waterman score: 2007; 98.7% identity (98.7% similar) in 313 aa overlap (98-410:6-315)
70 80 90 100 110 120
pF1KB7 QRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFSMKVCEKV
: : ::::::::::::::::::::::::
XP_016 MSTLPSKW---KRNRKGEKNGKGLRHFSMKVCEKV
10 20 30
130 140 150 160 170 180
pF1KB7 QRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 EIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQA
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB7 SRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMAC
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB7 GLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFSASDLTNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFSASDLTNG
220 230 240 250 260 270
370 380 390 400 410
pF1KB7 ADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
:::::::::::::::::::::::::::::::::::::::::::
XP_016 ADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
280 290 300 310
>>XP_005268388 (OMIM: 189902) PREDICTED: transcription f (311 aa)
initn: 1966 init1: 1656 opt: 1964 Z-score: 1894.8 bits: 359.1 E(85289): 8.4e-99
Smith-Waterman score: 1964; 97.4% identity (97.4% similar) in 313 aa overlap (98-410:6-311)
70 80 90 100 110 120
pF1KB7 QRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFSMKVCEKV
: : ::::::::::::::::::::::::
XP_005 MSTLPSKW---KRNRKGEKNGKGLRHFSMKVCEKV
10 20 30
130 140 150 160 170 180
pF1KB7 QRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 EIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQA
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB7 SRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMAC
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB7 GLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFSASDLTNG
:::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_005 GLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGT----SDLTNG
220 230 240 250 260
370 380 390 400 410
pF1KB7 ADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
:::::::::::::::::::::::::::::::::::::::::::
XP_005 ADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
270 280 290 300 310
410 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:05:31 2016 done: Sat Nov 5 10:05:33 2016
Total Scan time: 9.410 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]