Result of FASTA (omim) for
pF1KB7654
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7654, 371 aa
1>>>pF1KB7654 371 - 371 aa - 371 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2824+/-0.000328; mu= 14.2784+/- 0.021
mean_var=136.6932+/-27.325, 0's: 0 Z-trim(119.5): 93 B-trim: 397 in 1/54
Lambda= 0.109699
statistics sampled from 33580 (33686) to 33580 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.754), E-opt: 0.2 (0.395), width: 16
Scan time: 10.150
The best scores are: opt bits E(85289)
NP_006359 (OMIM: 606443) cyclic AMP-responsive ele ( 371) 2453 399.3 7.3e-111
XP_016855861 (OMIM: 607138) PREDICTED: cyclic AMP- ( 375) 519 93.2 1e-18
NP_001242910 (OMIM: 607138) cyclic AMP-responsive ( 375) 519 93.2 1e-18
XP_006711235 (OMIM: 607138) PREDICTED: cyclic AMP- ( 375) 519 93.2 1e-18
NP_001242909 (OMIM: 607138) cyclic AMP-responsive ( 375) 519 93.2 1e-18
NP_570968 (OMIM: 607138) cyclic AMP-responsive ele ( 395) 519 93.3 1e-18
NP_001242907 (OMIM: 607138) cyclic AMP-responsive ( 395) 519 93.3 1e-18
NP_001242908 (OMIM: 607138) cyclic AMP-responsive ( 395) 519 93.3 1e-18
NP_001258925 (OMIM: 611998) cyclic AMP-responsive ( 459) 508 91.6 3.9e-18
NP_001258924 (OMIM: 611998) cyclic AMP-responsive ( 460) 508 91.6 3.9e-18
NP_115996 (OMIM: 611998) cyclic AMP-responsive ele ( 461) 508 91.6 3.9e-18
NP_443086 (OMIM: 616215) cyclic AMP-responsive ele ( 519) 387 72.5 2.5e-12
XP_016868030 (OMIM: 608834) PREDICTED: cyclic AMP- ( 457) 378 71.0 6e-12
XP_005250598 (OMIM: 608834) PREDICTED: cyclic AMP- ( 457) 378 71.0 6e-12
NP_001305175 (OMIM: 608834) cyclic AMP-responsive ( 457) 378 71.0 6e-12
XP_016868029 (OMIM: 608834) PREDICTED: cyclic AMP- ( 457) 378 71.0 6e-12
NP_919047 (OMIM: 608834) cyclic AMP-responsive ele ( 520) 378 71.1 6.6e-12
XP_006718443 (OMIM: 616215) PREDICTED: cyclic AMP- ( 363) 311 60.3 8e-09
>>NP_006359 (OMIM: 606443) cyclic AMP-responsive element (371 aa)
initn: 2453 init1: 2453 opt: 2453 Z-score: 2111.3 bits: 399.3 E(85289): 7.3e-111
Smith-Waterman score: 2453; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)
10 20 30 40 50 60
pF1KB7 MELELDAGDQDLLAFLLEESGDLGTAPDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MELELDAGDQDLLAFLLEESGDLGTAPDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PASLNILSSSNPCLVHHDHTYSLPRETVSMDLESESCRKEGTQMTPQHMEELAEQEIARL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PASLNILSSSNPCLVHHDHTYSLPRETVSMDLESESCRKEGTQMTPQHMEELAEQEIARL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VLTDEEKSLLEKEGLILPETLPLTKTEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VLTDEEKSLLEKEGLILPETLPLTKTEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RVLKYTAQNMELQNKVQLLEEQNLSLLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RVLKYTAQNMELQNKVQLLEEQNLSLLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LLVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LLVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 VLQAPGNTSCLLHYMPQAPSAEPPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VLQAPGNTSCLLHYMPQAPSAEPPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGS
310 320 330 340 350 360
370
pF1KB7 PSVILQDRYSG
:::::::::::
NP_006 PSVILQDRYSG
370
>>XP_016855861 (OMIM: 607138) PREDICTED: cyclic AMP-resp (375 aa)
initn: 534 init1: 488 opt: 519 Z-score: 457.1 bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
: :::::: :: .::. :: :::::.::.
XP_016 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::.::::::::.:::.:::.:: :. :::::: .:::.:::.::: ::..:.::. :
XP_016 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
::.::... . :::....:::.:.:: :. :...:.. ..: .: ::: ::.
XP_016 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
. : .: . :...: .. .. ..: : :.: ::. : :
XP_016 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
320 330 340 350 360
330 340 350 360 370
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
XP_016 RSVLHADEM
370
>>NP_001242910 (OMIM: 607138) cyclic AMP-responsive elem (375 aa)
initn: 534 init1: 488 opt: 519 Z-score: 457.1 bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
: :::::: :: .::. :: :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::.::::::::.:::.:::.:: :. :::::: .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
::.::... . :::....:::.:.:: :. :...:.. ..: .: ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
. : .: . :...: .. .. ..: : :.: ::. : :
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
320 330 340 350 360
330 340 350 360 370
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
NP_001 RSVLHADEM
370
>>XP_006711235 (OMIM: 607138) PREDICTED: cyclic AMP-resp (375 aa)
initn: 534 init1: 488 opt: 519 Z-score: 457.1 bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
: :::::: :: .::. :: :::::.::.
XP_006 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::.::::::::.:::.:::.:: :. :::::: .:::.:::.::: ::..:.::. :
XP_006 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
::.::... . :::....:::.:.:: :. :...:.. ..: .: ::: ::.
XP_006 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
. : .: . :...: .. .. ..: : :.: ::. : :
XP_006 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
320 330 340 350 360
330 340 350 360 370
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
XP_006 RSVLHADEM
370
>>NP_001242909 (OMIM: 607138) cyclic AMP-responsive elem (375 aa)
initn: 534 init1: 488 opt: 519 Z-score: 457.1 bits: 93.2 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:167-360)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
: :::::: :: .::. :: :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::.::::::::.:::.:::.:: :. :::::: .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
::.::... . :::....:::.:.:: :. :...:.. ..: .: ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
. : .: . :...: .. .. ..: : :.: ::. : :
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
320 330 340 350 360
330 340 350 360 370
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
NP_001 RSVLHADEM
370
>>NP_570968 (OMIM: 607138) cyclic AMP-responsive element (395 aa)
initn: 534 init1: 488 opt: 519 Z-score: 456.8 bits: 93.3 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:187-380)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
: :::::: :: .::. :: :::::.::.
NP_570 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
160 170 180 190 200 210
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::.::::::::.:::.:::.:: :. :::::: .:::.:::.::: ::..:.::. :
NP_570 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
220 230 240 250 260 270
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
::.::... . :::....:::.:.:: :. :...:.. ..: .: ::: ::.
NP_570 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
280 290 300 310 320 330
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
. : .: . :...: .. .. ..: : :.: ::. : :
NP_570 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
340 350 360 370 380
330 340 350 360 370
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
NP_570 RSVLHADEM
390
>>NP_001242907 (OMIM: 607138) cyclic AMP-responsive elem (395 aa)
initn: 534 init1: 488 opt: 519 Z-score: 456.8 bits: 93.3 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:187-380)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
: :::::: :: .::. :: :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
160 170 180 190 200 210
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::.::::::::.:::.:::.:: :. :::::: .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
220 230 240 250 260 270
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
::.::... . :::....:::.:.:: :. :...:.. ..: .: ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
280 290 300 310 320 330
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
. : .: . :...: .. .. ..: : :.: ::. : :
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
340 350 360 370 380
330 340 350 360 370
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
NP_001 RSVLHADEM
390
>>NP_001242908 (OMIM: 607138) cyclic AMP-responsive elem (395 aa)
initn: 534 init1: 488 opt: 519 Z-score: 456.8 bits: 93.3 E(85289): 1e-18
Smith-Waterman score: 519; 46.6% identity (72.1% similar) in 204 aa overlap (120-319:187-380)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
: :::::: :: .::. :: :::::.::.
NP_001 ELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEER
160 170 180 190 200 210
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::.::::::::.:::.:::.:: :. :::::: .:::.:::.::: ::..:.::. :
NP_001 VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQ
220 230 240 250 260 270
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAE----HGVLSRQ
::.::... . :::....:::.:.:: :. :...:.. ..: .: ::: ::.
NP_001 LRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRN
280 290 300 310 320 330
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPKDSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPPL
. : .: . :...: .. .. ..: : :.: ::. : :
NP_001 I--LTHKDVTE----NLETQVVESRLREPPGAKD----ANGSTRTLLEKMGGKPRPSGRI
340 350 360 370 380
330 340 350 360 370
pF1KB7 EWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
NP_001 RSVLHADEM
390
>>NP_001258925 (OMIM: 611998) cyclic AMP-responsive elem (459 aa)
initn: 561 init1: 503 opt: 508 Z-score: 446.6 bits: 91.6 E(85289): 3.9e-18
Smith-Waterman score: 508; 47.3% identity (74.7% similar) in 186 aa overlap (120-298:211-396)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
::::..::.:: :::. :: ::::: ::.
NP_001 KDLLLSGSSGDLHHLGASYLLRPGAGHCQELVLTEDEKKLLAKEGITLPTQLPLTKYEER
190 200 210 220 230 240
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::..:::::::.::::::.::: :. :::.:. ::::.::: :: ::.::::::.:
NP_001 VLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNLSLLEQ
250 260 270 280 290 300
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYS-SDTRGSLPAEHG---VLSRQ
:.::::.:.. ..:.....::. :::.:: :...:.. . .. :.. . :.::
NP_001 LKKLQAIVVQSTSKSAQTGTCVAVLLLSFALIILPSISPFGPNKTESPGDFAPVRVFSRT
310 320 330 340 350 360
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPK---DSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAE
:. . .:. .. :. :.:.. ::
NP_001 LHNDAASRVAADAVPGSEAPGPRPEADTTREESPGSPGADWGFQDTANLTNSTEELDNAT
370 380 390 400 410 420
330 340 350 360 370
pF1KB7 PPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
NP_001 LVLRNATEGLGQVALLDWVAPGPSTGSGRAGLEAAGDEL
430 440 450
>>NP_001258924 (OMIM: 611998) cyclic AMP-responsive elem (460 aa)
initn: 561 init1: 503 opt: 508 Z-score: 446.6 bits: 91.6 E(85289): 3.9e-18
Smith-Waterman score: 508; 47.3% identity (74.7% similar) in 186 aa overlap (120-298:212-397)
90 100 110 120 130 140
pF1KB7 MDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTKTEEQ
::::..::.:: :::. :: ::::: ::.
NP_001 LLLSGSSGDLQQHHLGASYLLRPGAGHCQELVLTEDEKKLLAKEGITLPTQLPLTKYEER
190 200 210 220 230 240
150 160 170 180 190 200
pF1KB7 ILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSLLDQ
.::..:::::::.::::::.::: :. :::.:. ::::.::: :: ::.::::::.:
NP_001 VLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNLSLLEQ
250 260 270 280 290 300
210 220 230 240 250 260
pF1KB7 LRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYS-SDTRGSLPAEHG---VLSRQ
:.::::.:.. ..:.....::. :::.:: :...:.. . .. :.. . :.::
NP_001 LKKLQAIVVQSTSKSAQTGTCVAVLLLSFALIILPSISPFGPNKTESPGDFAPVRVFSRT
310 320 330 340 350 360
270 280 290 300 310 320
pF1KB7 LRALPSEDPYQLELPALQSEVPK---DSTHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAE
:. . .:. .. :. :.:.. ::
NP_001 LHNDAASRVAADAVPGSEAPGPRPEADTTREESPGSPGADWGFQDTANLTNSTEELDNAT
370 380 390 400 410 420
330 340 350 360 370
pF1KB7 PPLEWPFPDLFSEPLCRGPILPLQANLTRKGGWLPTGSPSVILQDRYSG
NP_001 LVLRNATEGLGQVALLDWVAPGPSTGSGRAGLEAAGDEL
430 440 450 460
371 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:07:35 2016 done: Fri Nov 4 09:07:36 2016
Total Scan time: 10.150 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]