Result of FASTA (omim) for
pF1KB7622
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7622, 368 aa
1>>>pF1KB7622 368 - 368 aa - 368 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5333+/-0.000416; mu= 6.1138+/- 0.025
mean_var=205.0987+/-42.574, 0's: 0 Z-trim(118.3): 2020 B-trim: 140 in 1/56
Lambda= 0.089556
statistics sampled from 28831 (31113) to 28831 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.365), width: 16
Scan time: 8.790
The best scores are: opt bits E(85289)
NP_008896 (OMIM: 194534) zinc finger protein 24 is ( 368) 2534 340.2 4.5e-93
XP_005258398 (OMIM: 194534) PREDICTED: zinc finger ( 368) 2534 340.2 4.5e-93
NP_001295052 (OMIM: 194534) zinc finger protein 24 ( 193) 1281 178.0 1.6e-44
NP_001309215 (OMIM: 609600) zinc finger protein 39 ( 335) 1201 167.9 3e-41
XP_016881177 (OMIM: 609600) PREDICTED: zinc finger ( 335) 1201 167.9 3e-41
XP_016881176 (OMIM: 609600) PREDICTED: zinc finger ( 335) 1201 167.9 3e-41
NP_001309219 (OMIM: 609600) zinc finger protein 39 ( 335) 1201 167.9 3e-41
XP_006722495 (OMIM: 609600) PREDICTED: zinc finger ( 335) 1201 167.9 3e-41
NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 1164 163.2 9.3e-40
XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1164 163.2 9.3e-40
XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1164 163.2 9.3e-40
NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 1164 163.2 9.3e-40
NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 1164 163.2 9.3e-40
NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1164 163.2 9.3e-40
NP_665699 (OMIM: 609600) zinc finger protein 396 i ( 333) 1064 150.2 6.3e-36
NP_006290 (OMIM: 602246) zinc finger and SCAN doma ( 394) 1063 150.2 7.7e-36
XP_016866756 (OMIM: 602246) PREDICTED: zinc finger ( 394) 1063 150.2 7.7e-36
NP_001186409 (OMIM: 602246) zinc finger and SCAN d ( 394) 1063 150.2 7.7e-36
XP_011513180 (OMIM: 602246) PREDICTED: zinc finger ( 526) 1063 150.3 9.4e-36
XP_011513319 (OMIM: 603978) PREDICTED: zinc finger ( 565) 1039 147.2 8.4e-35
NP_666019 (OMIM: 601261) zinc finger and SCAN doma ( 473) 894 128.4 3.3e-29
XP_005250625 (OMIM: 601261) PREDICTED: zinc finger ( 473) 894 128.4 3.3e-29
XP_016868073 (OMIM: 601261) PREDICTED: zinc finger ( 473) 894 128.4 3.3e-29
XP_006716176 (OMIM: 601261) PREDICTED: zinc finger ( 473) 894 128.4 3.3e-29
NP_001307884 (OMIM: 616463) zinc finger protein 23 ( 416) 891 128.0 3.9e-29
XP_016880511 (OMIM: 616463) PREDICTED: zinc finger ( 368) 882 126.8 8.1e-29
XP_016881178 (OMIM: 609600) PREDICTED: zinc finger ( 266) 726 106.4 7.6e-23
NP_001309220 (OMIM: 609600) zinc finger protein 39 ( 210) 675 99.7 6.2e-21
NP_001230172 (OMIM: 610794) zinc finger and SCAN d ( 247) 641 95.4 1.5e-19
NP_001230173 (OMIM: 610794) zinc finger and SCAN d ( 247) 641 95.4 1.5e-19
NP_001230171 (OMIM: 610794) zinc finger and SCAN d ( 247) 641 95.4 1.5e-19
XP_006715281 (OMIM: 612791) PREDICTED: zinc finger ( 390) 633 94.6 4.1e-19
NP_001229824 (OMIM: 612791) zinc finger protein wi ( 390) 633 94.6 4.1e-19
XP_005249480 (OMIM: 612791) PREDICTED: zinc finger ( 405) 633 94.6 4.2e-19
XP_016866809 (OMIM: 612791) PREDICTED: zinc finger ( 509) 633 94.7 4.9e-19
XP_006715279 (OMIM: 612791) PREDICTED: zinc finger ( 509) 633 94.7 4.9e-19
NP_001229823 (OMIM: 612791) zinc finger protein wi ( 538) 633 94.8 5e-19
XP_006715278 (OMIM: 612791) PREDICTED: zinc finger ( 538) 633 94.8 5e-19
NP_077819 (OMIM: 612791) zinc finger protein with ( 538) 633 94.8 5e-19
XP_011512891 (OMIM: 611643) PREDICTED: zinc finger ( 390) 595 89.7 1.2e-17
XP_016866333 (OMIM: 611643) PREDICTED: zinc finger ( 390) 595 89.7 1.2e-17
NP_001291435 (OMIM: 611643) zinc finger protein wi ( 390) 595 89.7 1.2e-17
>>NP_008896 (OMIM: 194534) zinc finger protein 24 isofor (368 aa)
initn: 2534 init1: 2534 opt: 2534 Z-score: 1791.9 bits: 340.2 E(85289): 4.5e-93
Smith-Waterman score: 2534; 99.7% identity (100.0% similar) in 368 aa overlap (1-368:1-368)
10 20 30 40 50 60
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 QDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 EEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLSMGVPQIFKYGETCFPKGRFE
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
NP_008 WELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLNMGVPQIFKYGETCFPKGRFE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 HTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAE
310 320 330 340 350 360
pF1KB7 KLLNVVKV
::::::::
NP_008 KLLNVVKV
>>XP_005258398 (OMIM: 194534) PREDICTED: zinc finger pro (368 aa)
initn: 2534 init1: 2534 opt: 2534 Z-score: 1791.9 bits: 340.2 E(85289): 4.5e-93
Smith-Waterman score: 2534; 99.7% identity (100.0% similar) in 368 aa overlap (1-368:1-368)
10 20 30 40 50 60
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLSMGVPQIFKYGETCFPKGRFE
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
XP_005 WELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLNMGVPQIFKYGETCFPKGRFE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAE
310 320 330 340 350 360
pF1KB7 KLLNVVKV
::::::::
XP_005 KLLNVVKV
>>NP_001295052 (OMIM: 194534) zinc finger protein 24 iso (193 aa)
initn: 1281 init1: 1281 opt: 1281 Z-score: 920.4 bits: 178.0 E(85289): 1.6e-44
Smith-Waterman score: 1281; 100.0% identity (100.0% similar) in 189 aa overlap (1-189:1-189)
10 20 30 40 50 60
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 WELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLSMGVPQIFKYGETCFPKGRFE
:::::::::
NP_001 WELHSLRHCVIIP
190
>>NP_001309215 (OMIM: 609600) zinc finger protein 396 is (335 aa)
initn: 1106 init1: 925 opt: 1201 Z-score: 861.6 bits: 167.9 E(85289): 3e-41
Smith-Waterman score: 1201; 57.4% identity (77.4% similar) in 340 aa overlap (1-333:1-333)
10 20 30 40 50
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEE-----DPDGEEGSSIPWNHLPDPEIFRQRF
:::. . ..: :. : .: . :: :.:: ::: ::. :. .:: :::.:
NP_001 MSAK-LGKSSSLLTQTSEECNGILTEKMEEEEQTCDPD----SSLHWSSSYSPETFRQQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 RQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDH
:::::::::::.::.:.: :::.::::::.:::::::::.:::::.::::::::.::. :
NP_001 RQFGYQDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 HPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQ
:::::::.::.:::.: ::: : : . . ::: ....: .. .: .. ::::.: :..:
NP_001 HPENGEETVTMLEDVERELDGPKQ-IFFGRRK-DMIAEKLAPSEITEELPSSQLMPVKKQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LKWASWELHSLRHCDDDGRTENGALAPKQELPSALESH-EVPGTLSMGVPQIFKYGETCF
:. :::::.::: :.: .: : : .:. ..: : .: . : :. : : :
NP_001 LQGASWELQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 PKGRFERKR-NPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSI
::::... ::: :::. :::::: :::.::::::::::::.:::.: ::.::::::.:
NP_001 QDGRFEKRQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRH
:.::.:.::::::::: .:::::::.:.:. :.. : .:
NP_001 LIQHRRTHTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
300 310 320 330
360
pF1KB7 QRRHNAEKLLNVVKV
>>XP_016881177 (OMIM: 609600) PREDICTED: zinc finger pro (335 aa)
initn: 1106 init1: 925 opt: 1201 Z-score: 861.6 bits: 167.9 E(85289): 3e-41
Smith-Waterman score: 1201; 57.4% identity (77.4% similar) in 340 aa overlap (1-333:1-333)
10 20 30 40 50
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEE-----DPDGEEGSSIPWNHLPDPEIFRQRF
:::. . ..: :. : .: . :: :.:: ::: ::. :. .:: :::.:
XP_016 MSAK-LGKSSSLLTQTSEECNGILTEKMEEEEQTCDPD----SSLHWSSSYSPETFRQQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 RQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDH
:::::::::::.::.:.: :::.::::::.:::::::::.:::::.::::::::.::. :
XP_016 RQFGYQDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 HPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQ
:::::::.::.:::.: ::: : : . . ::: ....: .. .: .. ::::.: :..:
XP_016 HPENGEETVTMLEDVERELDGPKQ-IFFGRRK-DMIAEKLAPSEITEELPSSQLMPVKKQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LKWASWELHSLRHCDDDGRTENGALAPKQELPSALESH-EVPGTLSMGVPQIFKYGETCF
:. :::::.::: :.: .: : : .:. ..: : .: . : :. : : :
XP_016 LQGASWELQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 PKGRFERKR-NPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSI
::::... ::: :::. :::::: :::.::::::::::::.:::.: ::.::::::.:
XP_016 QDGRFEKRQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRH
:.::.:.::::::::: .:::::::.:.:. :.. : .:
XP_016 LIQHRRTHTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
300 310 320 330
360
pF1KB7 QRRHNAEKLLNVVKV
>>XP_016881176 (OMIM: 609600) PREDICTED: zinc finger pro (335 aa)
initn: 1106 init1: 925 opt: 1201 Z-score: 861.6 bits: 167.9 E(85289): 3e-41
Smith-Waterman score: 1201; 57.4% identity (77.4% similar) in 340 aa overlap (1-333:1-333)
10 20 30 40 50
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEE-----DPDGEEGSSIPWNHLPDPEIFRQRF
:::. . ..: :. : .: . :: :.:: ::: ::. :. .:: :::.:
XP_016 MSAK-LGKSSSLLTQTSEECNGILTEKMEEEEQTCDPD----SSLHWSSSYSPETFRQQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 RQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDH
:::::::::::.::.:.: :::.::::::.:::::::::.:::::.::::::::.::. :
XP_016 RQFGYQDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 HPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQ
:::::::.::.:::.: ::: : : . . ::: ....: .. .: .. ::::.: :..:
XP_016 HPENGEETVTMLEDVERELDGPKQ-IFFGRRK-DMIAEKLAPSEITEELPSSQLMPVKKQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LKWASWELHSLRHCDDDGRTENGALAPKQELPSALESH-EVPGTLSMGVPQIFKYGETCF
:. :::::.::: :.: .: : : .:. ..: : .: . : :. : : :
XP_016 LQGASWELQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 PKGRFERKR-NPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSI
::::... ::: :::. :::::: :::.::::::::::::.:::.: ::.::::::.:
XP_016 QDGRFEKRQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRH
:.::.:.::::::::: .:::::::.:.:. :.. : .:
XP_016 LIQHRRTHTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
300 310 320 330
360
pF1KB7 QRRHNAEKLLNVVKV
>>NP_001309219 (OMIM: 609600) zinc finger protein 396 is (335 aa)
initn: 1106 init1: 925 opt: 1201 Z-score: 861.6 bits: 167.9 E(85289): 3e-41
Smith-Waterman score: 1201; 57.4% identity (77.4% similar) in 340 aa overlap (1-333:1-333)
10 20 30 40 50
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEE-----DPDGEEGSSIPWNHLPDPEIFRQRF
:::. . ..: :. : .: . :: :.:: ::: ::. :. .:: :::.:
NP_001 MSAK-LGKSSSLLTQTSEECNGILTEKMEEEEQTCDPD----SSLHWSSSYSPETFRQQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 RQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDH
:::::::::::.::.:.: :::.::::::.:::::::::.:::::.::::::::.::. :
NP_001 RQFGYQDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 HPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQ
:::::::.::.:::.: ::: : : . . ::: ....: .. .: .. ::::.: :..:
NP_001 HPENGEETVTMLEDVERELDGPKQ-IFFGRRK-DMIAEKLAPSEITEELPSSQLMPVKKQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LKWASWELHSLRHCDDDGRTENGALAPKQELPSALESH-EVPGTLSMGVPQIFKYGETCF
:. :::::.::: :.: .: : : .:. ..: : .: . : :. : : :
NP_001 LQGASWELQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 PKGRFERKR-NPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSI
::::... ::: :::. :::::: :::.::::::::::::.:::.: ::.::::::.:
NP_001 QDGRFEKRQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRH
:.::.:.::::::::: .:::::::.:.:. :.. : .:
NP_001 LIQHRRTHTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
300 310 320 330
360
pF1KB7 QRRHNAEKLLNVVKV
>>XP_006722495 (OMIM: 609600) PREDICTED: zinc finger pro (335 aa)
initn: 1106 init1: 925 opt: 1201 Z-score: 861.6 bits: 167.9 E(85289): 3e-41
Smith-Waterman score: 1201; 57.4% identity (77.4% similar) in 340 aa overlap (1-333:1-333)
10 20 30 40 50
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILRVKLEE-----DPDGEEGSSIPWNHLPDPEIFRQRF
:::. . ..: :. : .: . :: :.:: ::: ::. :. .:: :::.:
XP_006 MSAK-LGKSSSLLTQTSEECNGILTEKMEEEEQTCDPD----SSLHWSSSYSPETFRQQF
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 RQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDH
:::::::::::.::.:.: :::.::::::.:::::::::.:::::.::::::::.::. :
XP_006 RQFGYQDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 HPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQ
:::::::.::.:::.: ::: : : . . ::: ....: .. .: .. ::::.: :..:
XP_006 HPENGEETVTMLEDVERELDGPKQ-IFFGRRK-DMIAEKLAPSEITEELPSSQLMPVKKQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LKWASWELHSLRHCDDDGRTENGALAPKQELPSALESH-EVPGTLSMGVPQIFKYGETCF
:. :::::.::: :.: .: : : .:. ..: : .: . : :. : : :
XP_006 LQGASWELQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB7 PKGRFERKR-NPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSI
::::... ::: :::. :::::: :::.::::::::::::.:::.: ::.::::::.:
XP_006 QDGRFEKRQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRH
:.::.:.::::::::: .:::::::.:.:. :.. : .:
XP_006 LIQHRRTHTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
300 310 320 330
360
pF1KB7 QRRHNAEKLLNVVKV
>>NP_001128688 (OMIM: 610794) zinc finger and SCAN domai (406 aa)
initn: 1088 init1: 590 opt: 1164 Z-score: 834.8 bits: 163.2 E(85289): 9.3e-40
Smith-Waterman score: 1164; 53.0% identity (76.1% similar) in 347 aa overlap (19-361:5-349)
10 20 30 40 50
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILR-VKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFG
::. :. ::.:::: .. . . :.. : :: ::::
NP_001 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFC
10 20 30 40
60 70 80 90 100 110
pF1KB7 YQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPEN
::..::::::.:.:::::. ::::: :::::::::.:::::..:::.:::.:::.::::.
NP_001 YQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPES
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 GEEAVTVLEDLESELDDPG-QPVSLRRRKREVLVEDMVSQEEAQGLPSS-ELDAVENQLK
:::::.:.::::.::..:: : . .. . :::.:: : . ... :.. .:. . .::.
NP_001 GEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLED-VEHLKVKQEPTDIQLQPMVTQLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 WASWELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLSMGVPQIFKYGETCFPKG
. :. ::.... : .. :: :: :::. . .: : . :. : :: ::: .
NP_001 YESFCLHQFQEQDGESIPENQELASKQEILKEME-HLGDSKLQRDVSLDSKYRETCKRDS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 RFERKRNPSR-KKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQ
. :... : ...: :.:::: :...:.:: :::::.::::: : :::::::: : : .
NP_001 KAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNE
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 HQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRR
:.: :::::::.: ::::::: ..:: :.::::::::::: :::.. :: : .:::
NP_001 HRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRI
290 300 310 320 330 340
360
pF1KB7 HNAEKLLNVVKV
:..::
NP_001 HTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKIHTGE
350 360 370 380 390 400
>--
initn: 473 init1: 238 opt: 254 Z-score: 199.4 bits: 45.7 E(85289): 0.00023
Smith-Waterman score: 254; 60.7% identity (80.4% similar) in 56 aa overlap (279-334:351-406)
250 260 270 280 290 300
pF1KB7 KQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK
: : :::::: ... : :: :::::::::.
NP_001 KPYECKVCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQ
330 340 350 360 370 380
310 320 330 340 350 360
pF1KB7 CLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKLLNVVKV
: .:.: ::. . : .::.:::::.:
NP_001 CSQCSKLFSKRTLLKKHQKIHTGERP
390 400
>>XP_016866685 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 1088 init1: 590 opt: 1164 Z-score: 834.8 bits: 163.2 E(85289): 9.3e-40
Smith-Waterman score: 1164; 53.0% identity (76.1% similar) in 347 aa overlap (19-361:5-349)
10 20 30 40 50
pF1KB7 MSAQSVEEDSILIIPTPDEEEKILR-VKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFG
::. :. ::.:::: .. . . :.. : :: ::::
XP_016 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFC
10 20 30 40
60 70 80 90 100 110
pF1KB7 YQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPEN
::..::::::.:.:::::. ::::: :::::::::.:::::..:::.:::.:::.::::.
XP_016 YQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPES
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 GEEAVTVLEDLESELDDPG-QPVSLRRRKREVLVEDMVSQEEAQGLPSS-ELDAVENQLK
:::::.:.::::.::..:: : . .. . :::.:: : . ... :.. .:. . .::.
XP_016 GEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLED-VEHLKVKQEPTDIQLQPMVTQLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 WASWELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLSMGVPQIFKYGETCFPKG
. :. ::.... : .. :: :: :::. . .: : . :. : :: ::: .
XP_016 YESFCLHQFQEQDGESIPENQELASKQEILKEME-HLGDSKLQRDVSLDSKYRETCKRDS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 RFERKRNPSR-KKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQ
. :... : ...: :.:::: :...:.:: :::::.::::: : :::::::: : : .
XP_016 KAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNE
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 HQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRR
:.: :::::::.: ::::::: ..:: :.::::::::::: :::.. :: : .:::
XP_016 HRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRI
290 300 310 320 330 340
360
pF1KB7 HNAEKLLNVVKV
:..::
XP_016 HTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKIHTGE
350 360 370 380 390 400
>--
initn: 473 init1: 238 opt: 254 Z-score: 199.4 bits: 45.7 E(85289): 0.00023
Smith-Waterman score: 254; 60.7% identity (80.4% similar) in 56 aa overlap (279-334:351-406)
250 260 270 280 290 300
pF1KB7 KQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK
: : :::::: ... : :: :::::::::.
XP_016 KPYECKVCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQ
330 340 350 360 370 380
310 320 330 340 350 360
pF1KB7 CLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKLLNVVKV
: .:.: ::. . : .::.:::::.:
XP_016 CSQCSKLFSKRTLLKKHQKIHTGERP
390 400
368 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:19:25 2016 done: Sat Nov 5 04:19:27 2016
Total Scan time: 8.790 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]