FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7523, 144 aa
  1>>>pF1KB7523 144 - 144 aa - 144 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2741+/-0.000573; mu= 12.5424+/- 0.035
 mean_var=67.6044+/-13.502, 0's: 0 Z-trim(112.3): 2  B-trim: 50 in 1/50
 Lambda= 0.155986
 statistics sampled from 13102 (13104) to 13102 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.403), width:  16
 Scan time:  1.580

The best scores are:                                      opt bits E(32554)
CCDS5663.1 BUD31 gene_id:8896|Hs108|chr7           ( 144) 1036 240.9   2e-64


>>CCDS5663.1 BUD31 gene_id:8896|Hs108|chr7                (144 aa)
 initn: 1036 init1: 1036 opt: 1036  Z-score: 1270.0  bits: 240.9 E(32554): 2e-64
Smith-Waterman score: 1036; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144)

               10        20        30        40        50        60
pF1KB7 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICR
               70        80        90       100       110       120

              130       140    
pF1KB7 VPKSKLEVGRIIECTHCGCRGCSG
       ::::::::::::::::::::::::
CCDS56 VPKSKLEVGRIIECTHCGCRGCSG
              130       140    




144 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:25:26 2016 done: Fri Nov  4 08:25:26 2016
 Total Scan time:  1.580 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]