Result of FASTA (ccds) for
pF1KB7427
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7427, 152 aa
1>>>pF1KB7427 152 - 152 aa - 152 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3368+/-0.000844; mu= 11.2517+/- 0.051
mean_var=58.7014+/-11.665, 0's: 0 Z-trim(105.6): 53 B-trim: 172 in 1/51
Lambda= 0.167398
statistics sampled from 8452 (8506) to 8452 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.261), width: 16
Scan time: 1.670
The best scores are: opt bits E(32554)
CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 1024 255.4 1e-68
CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 535 137.3 4.8e-33
CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 519 133.5 6.9e-32
CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 509 131.0 3.2e-31
CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 509 131.0 3.5e-31
CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 503 129.6 8.8e-31
CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 491 126.7 8.3e-30
CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 485 125.2 1.8e-29
CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 477 123.3 7.1e-29
CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 477 123.3 7.7e-29
CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 477 123.4 1.1e-28
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 464 120.2 9.8e-28
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 464 120.3 1.5e-27
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 464 120.3 1.7e-27
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 464 120.4 2.6e-27
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 464 120.4 3.3e-27
CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 451 117.0 5.9e-27
CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 440 114.4 3.8e-26
CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 428 111.5 3.2e-25
CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 428 111.5 3.6e-25
CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 425 110.7 3.7e-25
CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 428 111.6 4.9e-25
CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 396 103.8 6.2e-23
CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 347 92.0 4.1e-19
CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 347 92.1 4.6e-19
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 336 89.2 1.1e-18
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 336 89.2 1.2e-18
CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 341 90.6 1.2e-18
CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 341 90.6 1.3e-18
CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 331 88.2 6.9e-18
CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 328 87.5 1.5e-17
CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 328 87.5 1.5e-17
CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 322 86.0 2.8e-17
CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 322 86.0 3e-17
CCDS55652.1 RGS5 gene_id:8490|Hs108|chr1 ( 73) 282 76.1 4.6e-15
CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 287 77.5 1e-14
CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 287 77.6 1e-14
CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 287 77.6 1e-14
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 280 75.9 4e-14
CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 272 74.0 2.1e-13
CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 272 74.1 3.4e-13
CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 272 74.1 3.5e-13
CCDS10406.1 AXIN1 gene_id:8312|Hs108|chr16 ( 826) 239 66.1 5.3e-11
CCDS10405.1 AXIN1 gene_id:8312|Hs108|chr16 ( 862) 239 66.1 5.5e-11
>>CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 (152 aa)
initn: 1024 init1: 1024 opt: 1024 Z-score: 1347.3 bits: 255.4 E(32554): 1e-68
Smith-Waterman score: 1024; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152)
10 20 30 40 50 60
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIFLKSEFSEENVEFWLACEDFKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIFLKSEFSEENVEFWLACEDFKKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 KNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISKNIAEPTLKCFDEAQKLIYCLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISKNIAEPTLKCFDEAQKLIYCLMA
70 80 90 100 110 120
130 140 150
pF1KB7 KDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
::::::::::::::::::::::::::::::::
CCDS41 KDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
130 140 150
>>CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 (211 aa)
initn: 545 init1: 524 opt: 535 Z-score: 706.8 bits: 137.3 E(32554): 4.8e-33
Smith-Waterman score: 535; 58.1% identity (78.7% similar) in 136 aa overlap (7-142:69-204)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFR
: . :.. ::: .: :::.. :: :::
CCDS13 KDWKTRLSYFLQNSSTPGKPKTGKKSKQQAFIKPSPEEAQLWSEAFDELLASKYGLAAFR
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB7 IFLKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLI
:::::: :::.:::::::::::::. .:..:::. ::..::: .::::::::: :. ::
CCDS13 AFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLI
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB7 SKNIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
..:: : : :: ::: .: :: ..:.::::.::.:. : .. :.
CCDS13 AQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCKKPQITTEPHAT
160 170 180 190 200 210
>>CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 (209 aa)
initn: 534 init1: 288 opt: 519 Z-score: 686.0 bits: 133.5 E(32554): 6.9e-32
Smith-Waterman score: 519; 59.0% identity (81.3% similar) in 134 aa overlap (13-146:77-209)
10 20 30 40
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIFLKSE
::.: ::.... :::::.: ..: :::::
CCDS13 GMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSE
50 60 70 80 90 100
50 60 70 80 90 100
pF1KB7 FSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISKNIAE
:::::.::::::::.:::.. : . ::. ::. :...:: :.::::: ::. .:.:
CCDS13 FSEENIEFWLACEDYKKTES-DLLPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIKA
110 120 130 140 150 160
110 120 130 140 150
pF1KB7 PTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
:: :::::::.:: :: :::.::::::.:: .:.:. :. . :
CCDS13 PTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
170 180 190 200
>>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa)
initn: 471 init1: 471 opt: 509 Z-score: 674.0 bits: 131.0 E(32554): 3.2e-31
Smith-Waterman score: 509; 52.6% identity (82.7% similar) in 133 aa overlap (9-141:44-176)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIF
: : :. :....:.::... :. ::: :
CCDS41 RTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAF
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB7 LKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISK
::.::::::.:::::::.::::... :..:::. :. ::....::.:.:::: ::. :
CCDS41 LKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRK
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB7 NIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
:. ::.: :::.:: .. :: :::.::::.:..: :....:
CCDS41 NLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS
140 150 160 170 180
>>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa)
initn: 484 init1: 471 opt: 509 Z-score: 673.3 bits: 131.0 E(32554): 3.5e-31
Smith-Waterman score: 509; 52.6% identity (82.7% similar) in 133 aa overlap (9-141:62-194)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIF
: : :. :....:.::... :. ::: :
CCDS13 RTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAF
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB7 LKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISK
::.::::::.:::::::.::::... :..:::. :. ::....::.:.:::: ::. :
CCDS13 LKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRK
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB7 NIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
:. ::.: :::.:: .. :: :::.::::.:..: :....:
CCDS13 NLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS
160 170 180 190
>>CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 (181 aa)
initn: 500 init1: 467 opt: 503 Z-score: 666.1 bits: 129.6 E(32554): 8.8e-31
Smith-Waterman score: 503; 55.0% identity (81.4% similar) in 129 aa overlap (9-137:52-180)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIF
.. :.. : ...: :: :. :: .:. :
CCDS12 KLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 LKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISK
:::::::::.:::.::::.:: :. :.: :::.:: :::...::::.::: :.:. :
CCDS12 LKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDITMK
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 NIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
:..::.:. :: ::: :. :: :::.:::..::.:..:.
CCDS12 NLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELIK
150 160 170 180
>>CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 (235 aa)
initn: 481 init1: 451 opt: 491 Z-score: 648.6 bits: 126.7 E(32554): 8.3e-30
Smith-Waterman score: 491; 53.3% identity (83.2% similar) in 137 aa overlap (10-145:76-211)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIFL
:: :.. :.:..: ::... ::.:: ::
CCDS13 NRLSLLVQKPEFHEDTRSSRSGHLAKETRVSPE-EAVKWGESFDKLLSHRDGLEAFTRFL
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB7 KSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISKN
:.::::::.:::.:::::::.:. ..: ::: :: .::..:::::.:.:: :...:...
CCDS13 KTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNS
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB7 IAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQ-QVPNHKKWLPFL
:..:::. :: ::. .: :: .::. :::::.:: :.... : :..
CCDS13 ITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEF
170 180 190 200 210 220
CCDS13 QDVQSDVAIWL
230
>>CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 (185 aa)
initn: 455 init1: 276 opt: 485 Z-score: 642.4 bits: 125.2 E(32554): 1.8e-29
Smith-Waterman score: 485; 53.4% identity (78.9% similar) in 133 aa overlap (9-137:52-184)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIF
.. :.. : ...: :: :. :: .:. :
CCDS58 KLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 LKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEI----NIDFGTRD
:::::::::.:::.::::.:: :. :.: :::.:: :::...::::. ::: :.:
CCDS58 LKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVGLWVNIDHFTKD
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 LISKNIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
. ::..::.:. :: ::: :. :: :::.:::..::.:..:.
CCDS58 ITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELIK
150 160 170 180
>>CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 (187 aa)
initn: 472 init1: 472 opt: 477 Z-score: 631.9 bits: 123.3 E(32554): 7.1e-29
Smith-Waterman score: 477; 49.6% identity (77.7% similar) in 139 aa overlap (9-147:32-170)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIF
: :. :.:....:.... :: ::. :
CCDS44 KHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAFKAF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 LKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISK
::::.::::..::..::..:: :. .:.. ::: ::.::: ..: ::.:.: ::. :.
CCDS44 LKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 NIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
:. :::. ::::::: :. :: :::. :::::..: ::: .. .:.
CCDS44 NMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCAS
130 140 150 160 170 180
CCDS44 LVPQCA
>>CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 (205 aa)
initn: 472 init1: 472 opt: 477 Z-score: 631.3 bits: 123.3 E(32554): 7.7e-29
Smith-Waterman score: 477; 49.6% identity (77.7% similar) in 139 aa overlap (9-147:50-188)
10 20 30
pF1KB7 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIF
: :. :.:....:.... :: ::. :
CCDS12 KHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAFKAF
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB7 LKSEFSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISK
::::.::::..::..::..:: :. .:.. ::: ::.::: ..: ::.:.: ::. :.
CCDS12 LKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSR
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB7 NIAEPTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
:. :::. ::::::: :. :: :::. :::::..: ::: .. .:.
CCDS12 NMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCAS
140 150 160 170 180 190
CCDS12 LVPQCA
200
152 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:41:51 2016 done: Fri Nov 4 07:41:52 2016
Total Scan time: 1.670 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]