Result of FASTA (omim) for
pF1KB7397
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7397, 197 aa
1>>>pF1KB7397 197 - 197 aa - 197 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3763+/-0.00036; mu= 17.8847+/- 0.022
mean_var=56.7791+/-11.835, 0's: 0 Z-trim(113.5): 36 B-trim: 160 in 1/53
Lambda= 0.170208
statistics sampled from 22848 (22884) to 22848 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.268), width: 16
Scan time: 5.560
The best scores are: opt bits E(85289)
NP_001291462 (OMIM: 612872) sodium/potassium-trans ( 218) 1243 313.2 1.9e-85
XP_016868848 (OMIM: 612872) PREDICTED: sodium/pota ( 211) 1241 312.7 2.7e-85
XP_016868849 (OMIM: 612872) PREDICTED: sodium/pota ( 181) 1238 311.9 4e-85
XP_011515813 (OMIM: 612872) PREDICTED: sodium/pota ( 187) 1238 311.9 4.1e-85
XP_011515814 (OMIM: 612872) PREDICTED: sodium/pota ( 186) 1110 280.5 1.2e-75
NP_001035304 (OMIM: 609758) sodium/potassium-trans ( 208) 875 222.8 3e-58
XP_011533803 (OMIM: 609758) PREDICTED: sodium/pota ( 213) 875 222.8 3.1e-58
NP_690603 (OMIM: 612873) sodium/potassium-transpor ( 208) 840 214.2 1.2e-55
XP_011526829 (OMIM: 612873) PREDICTED: sodium/pota ( 222) 840 214.2 1.2e-55
XP_005260249 (OMIM: 612873) PREDICTED: sodium/pota ( 181) 838 213.7 1.5e-55
NP_078798 (OMIM: 612871) sodium/potassium-transpor ( 207) 822 209.8 2.5e-54
XP_016868850 (OMIM: 612872) PREDICTED: sodium/pota ( 156) 805 205.5 3.6e-53
NP_001287666 (OMIM: 609758) sodium/potassium-trans ( 207) 790 201.9 5.7e-52
XP_011533804 (OMIM: 609758) PREDICTED: sodium/pota ( 212) 790 201.9 5.8e-52
NP_699186 (OMIM: 609758) sodium/potassium-transpor ( 141) 522 136.0 2.8e-32
XP_016865808 (OMIM: 609758) PREDICTED: sodium/pota ( 146) 522 136.0 2.9e-32
XP_016883128 (OMIM: 612873) PREDICTED: sodium/pota ( 146) 479 125.4 4.3e-29
XP_016883127 (OMIM: 612873) PREDICTED: sodium/pota ( 146) 479 125.4 4.3e-29
XP_011526831 (OMIM: 612873) PREDICTED: sodium/pota ( 160) 479 125.5 4.6e-29
XP_011526830 (OMIM: 612873) PREDICTED: sodium/pota ( 160) 479 125.5 4.6e-29
XP_016883125 (OMIM: 612873) PREDICTED: sodium/pota ( 160) 479 125.5 4.6e-29
XP_016883126 (OMIM: 612873) PREDICTED: sodium/pota ( 160) 479 125.5 4.6e-29
XP_005260251 (OMIM: 612873) PREDICTED: sodium/pota ( 119) 477 124.9 5.2e-29
XP_016865807 (OMIM: 609758) PREDICTED: sodium/pota ( 181) 368 98.2 8.1e-21
XP_011533805 (OMIM: 609758) PREDICTED: sodium/pota ( 186) 368 98.2 8.3e-21
XP_016857809 (OMIM: 612871) PREDICTED: sodium/pota ( 180) 357 95.5 5.3e-20
NP_001287667 (OMIM: 609758) sodium/potassium-trans ( 118) 353 94.4 7.6e-20
NP_001287669 (OMIM: 609758) sodium/potassium-trans ( 106) 312 84.3 7.5e-17
>>NP_001291462 (OMIM: 612872) sodium/potassium-transport (218 aa)
initn: 1242 init1: 1242 opt: 1243 Z-score: 1654.8 bits: 313.2 E(85289): 1.9e-85
Smith-Waterman score: 1243; 93.7% identity (95.8% similar) in 191 aa overlap (1-191:1-191)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::..
NP_001 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTFDF
130 140 150 160 170 180
190
pF1KB7 DLQVCKHLFIQMLQIIE
. : . :
NP_001 IGGLDTHSYYQDHVELKPVKPVEISNDIEPEMRLLNLT
190 200 210
>>XP_016868848 (OMIM: 612872) PREDICTED: sodium/potassiu (211 aa)
initn: 1240 init1: 1240 opt: 1241 Z-score: 1652.4 bits: 312.7 E(85289): 2.7e-85
Smith-Waterman score: 1241; 98.9% identity (99.4% similar) in 180 aa overlap (1-180:1-179)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::. :
XP_016 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTW-C
130 140 150 160 170
190
pF1KB7 DLQVCKHLFIQMLQIIE
XP_016 TSNMVPAPAQLLERTQEAFTHDGRQSGRRHIT
180 190 200 210
>>XP_016868849 (OMIM: 612872) PREDICTED: sodium/potassiu (181 aa)
initn: 1238 init1: 1238 opt: 1238 Z-score: 1649.3 bits: 311.9 E(85289): 4e-85
Smith-Waterman score: 1238; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTCRN
130 140 150 160 170 180
190
pF1KB7 DLQVCKHLFIQMLQIIE
XP_016 K
>>XP_011515813 (OMIM: 612872) PREDICTED: sodium/potassiu (187 aa)
initn: 1238 init1: 1238 opt: 1238 Z-score: 1649.1 bits: 311.9 E(85289): 4.1e-85
Smith-Waterman score: 1238; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTCLF
130 140 150 160 170 180
190
pF1KB7 DLQVCKHLFIQMLQIIE
XP_011 CQDDAPS
>>XP_011515814 (OMIM: 612872) PREDICTED: sodium/potassiu (186 aa)
initn: 1110 init1: 1110 opt: 1110 Z-score: 1479.3 bits: 280.5 E(85289): 1.2e-75
Smith-Waterman score: 1110; 100.0% identity (100.0% similar) in 157 aa overlap (1-157:1-157)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
:::::::::::::::::::::::::::::::::::::
XP_011 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSPEQVPRVSGAWNWKKSHLCHKHS
130 140 150 160 170 180
190
pF1KB7 DLQVCKHLFIQMLQIIE
XP_011 TDCVHA
>>NP_001035304 (OMIM: 609758) sodium/potassium-transport (208 aa)
initn: 872 init1: 544 opt: 875 Z-score: 1166.7 bits: 222.8 E(85289): 3e-58
Smith-Waterman score: 875; 64.2% identity (87.2% similar) in 179 aa overlap (1-178:1-179)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
:: :.:::.:: .:..::: .::::::::::.::::::.::.:::.::::::::::::::
NP_001 MGYCSGRCTLIFICGMQLVCVLERQIFDFLGYQWAPILANFVHIIIVILGLFGTIQYRPR
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDL-MTFNISVHRSWWREHGPGCVRRVL
:: :.:: .::::::::.::::::.: :::.::: .:::::.::::: :.::::. .
NP_001 YITGYAVWLVLWVTWNVFVICFYLEAGDLSKETDLILTFNISMHRSWWMENGPGCTVTSV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 PPSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYS
:. .:. :..:.::....::.:: ::..::.:.:.::.:::::.. ::::..
NP_001 TPAPDWAPEDHRYITVSGCLLEYQYIEVAHSSLQIVLALAGFIYACYVVKCITEEEDSFD
130 140 150 160 170 180
180 190
pF1KB7 CDLQVCKHLFIQMLQIIE
NP_001 FIGGFDSYGYQGPQKTSHLQLQPMYMSK
190 200
>>XP_011533803 (OMIM: 609758) PREDICTED: sodium/potassiu (213 aa)
initn: 872 init1: 544 opt: 875 Z-score: 1166.6 bits: 222.8 E(85289): 3.1e-58
Smith-Waterman score: 875; 64.2% identity (87.2% similar) in 179 aa overlap (1-178:1-179)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
:: :.:::.:: .:..::: .::::::::::.::::::.::.:::.::::::::::::::
XP_011 MGYCSGRCTLIFICGMQLVCVLERQIFDFLGYQWAPILANFVHIIIVILGLFGTIQYRPR
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDL-MTFNISVHRSWWREHGPGCVRRVL
:: :.:: .::::::::.::::::.: :::.::: .:::::.::::: :.::::. .
XP_011 YITGYAVWLVLWVTWNVFVICFYLEAGDLSKETDLILTFNISMHRSWWMENGPGCTVTSV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 PPSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYS
:. .:. :..:.::....::.:: ::..::.:.:.::.:::::.. ::::..
XP_011 TPAPDWAPEDHRYITVSGCLLEYQYIEVAHSSLQIVLALAGFIYACYVVKCITEEEDSFD
130 140 150 160 170 180
180 190
pF1KB7 CDLQVCKHLFIQMLQIIE
XP_011 FIGGFDSYGYQGPQKTSHLQLQPMYMQIPLDNN
190 200 210
>>NP_690603 (OMIM: 612873) sodium/potassium-transporting (208 aa)
initn: 855 init1: 840 opt: 840 Z-score: 1120.3 bits: 214.2 E(85289): 1.2e-55
Smith-Waterman score: 840; 62.9% identity (86.5% similar) in 178 aa overlap (1-178:1-178)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
:: :.:::.:. :::.:::.:::::.:::::.::::::.::.:::.:::::::::::: :
NP_690 MGSCSGRCALVVLCAFQLVAALERQVFDFLGYQWAPILANFVHIIIVILGLFGTIQYRLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
:.::::.:.:.:::::::::::::::::: ::..:.::..: :::::::. :::... .:
NP_690 YVMVYTLWAAVWVTWNVFIICFYLEVGGLLKDSELLTFSLSRHRSWWRERWPGCLHEEVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
. : . :: .:: .. .:.:..:: .:::..:.::: .: :.:. ::::..
NP_690 AVGLGAPHGQALVSGAGCALEPSYVEALHSCLQILIALLGFVCGCQVVSVFTEEEDSFDF
130 140 150 160 170 180
190
pF1KB7 DLQVCKHLFIQMLQIIE
NP_690 IGGFDPFPLYHVNEKPSSLLSKQVYLPA
190 200
>>XP_011526829 (OMIM: 612873) PREDICTED: sodium/potassiu (222 aa)
initn: 855 init1: 840 opt: 840 Z-score: 1119.9 bits: 214.2 E(85289): 1.2e-55
Smith-Waterman score: 840; 62.9% identity (86.5% similar) in 178 aa overlap (1-178:1-178)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
:: :.:::.:. :::.:::.:::::.:::::.::::::.::.:::.:::::::::::: :
XP_011 MGSCSGRCALVVLCAFQLVAALERQVFDFLGYQWAPILANFVHIIIVILGLFGTIQYRLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
:.::::.:.:.:::::::::::::::::: ::..:.::..: :::::::. :::... .:
XP_011 YVMVYTLWAAVWVTWNVFIICFYLEVGGLLKDSELLTFSLSRHRSWWRERWPGCLHEEVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
. : . :: .:: .. .:.:..:: .:::..:.::: .: :.:. ::::..
XP_011 AVGLGAPHGQALVSGAGCALEPSYVEALHSCLQILIALLGFVCGCQVVSVFTEEEDSFDF
130 140 150 160 170 180
190
pF1KB7 DLQVCKHLFIQMLQIIE
XP_011 IGGFDPFPLYHVNEKPSSLLSKQVYFPTGQTPLRCQQTGTRR
190 200 210 220
>>XP_005260249 (OMIM: 612873) PREDICTED: sodium/potassiu (181 aa)
initn: 865 init1: 836 opt: 838 Z-score: 1118.4 bits: 213.7 E(85289): 1.5e-55
Smith-Waterman score: 838; 63.3% identity (85.6% similar) in 180 aa overlap (1-180:1-178)
10 20 30 40 50 60
pF1KB7 MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPR
:: :.:::.:. :::.:::.:::::.:::::.::::::.::.:::.:::::::::::: :
XP_005 MGSCSGRCALVVLCAFQLVAALERQVFDFLGYQWAPILANFVHIIIVILGLFGTIQYRLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 YIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLP
:.::::.:.:.:::::::::::::::::: ::..:.::..: :::::::. :::... .:
XP_005 YVMVYTLWAAVWVTWNVFIICFYLEVGGLLKDSELLTFSLSRHRSWWRERWPGCLHEEVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PSAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTYSC
. : . :: .:: .. .:.:..:: .:::..:.::: .: :.:. :::: ::
XP_005 AVGLGAPHGQALVSGAGCALEPSYVEALHSCLQILIALLGFVCGCQVVSVFTEEED--SC
130 140 150 160 170
190
pF1KB7 DLQVCKHLFIQMLQIIE
XP_005 LRK
180
197 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:23:27 2016 done: Fri Nov 4 07:23:28 2016
Total Scan time: 5.560 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]