Result of FASTA (ccds) for
pF1KB7351
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7351, 1256 aa
1>>>pF1KB7351 1256 - 1256 aa - 1256 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.8457+/-0.00113; mu= -6.0205+/- 0.068
mean_var=386.3507+/-78.309, 0's: 0 Z-trim(113.4): 47 B-trim: 13 in 1/52
Lambda= 0.065250
statistics sampled from 14048 (14084) to 14048 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.433), width: 16
Scan time: 5.690
The best scores are: opt bits E(32554)
CCDS43744.1 CSPP1 gene_id:79848|Hs108|chr8 (1221) 7218 694.7 3.7e-199
CCDS78344.1 CSPP1 gene_id:79848|Hs108|chr8 ( 876) 3426 337.6 8.2e-92
>>CCDS43744.1 CSPP1 gene_id:79848|Hs108|chr8 (1221 aa)
initn: 7218 init1: 7218 opt: 7218 Z-score: 3689.0 bits: 694.7 E(32554): 3.7e-199
Smith-Waterman score: 8029; 97.2% identity (97.2% similar) in 1256 aa overlap (1-1256:1-1221)
10 20 30 40 50 60
pF1KB7 MLFPLQVAAVTSSVRDDPLEHCVSPRTRARSPEICKMADNLDEFIEEQKARLAEDKAELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MLFPLQVAAVTSSVRDDPLEHCVSPRTRARSPEICKMADNLDEFIEEQKARLAEDKAELE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDPPYMEMKGKLSAKLSENSKILISMAKENIPPNSQQTRGSLGIDYGLSLPLGEDYERKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SDPPYMEMKGKLSAKLSENSKILISMAKENIPPNSQQTRGSLGIDYGLSLPLGEDYERKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 HKLKEELRQDYRRYLTQGITQGKRKKNFLSTSETDPSTLGVSLPIGERLSAKERLKLERN
::::::::::::::::: ::::::::
CCDS43 HKLKEELRQDYRRYLTQ-----------------------------------ERLKLERN
130 140
190 200 210 220 230 240
pF1KB7 KEYNQFLRGKEESSEKFRQVEKSTEPKSQRNKKPIGQVKPDLTSQIQTSCENSEGPRKDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KEYNQFLRGKEESSEKFRQVEKSTEPKSQRNKKPIGQVKPDLTSQIQTSCENSEGPRKDV
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB7 LTPSEAYEELLNQRRLEEDRYRQLDDEIELRNRRIIKKANEEVGISNLKHQRFASKAGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LTPSEAYEELLNQRRLEEDRYRQLDDEIELRNRRIIKKANEEVGISNLKHQRFASKAGIP
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB7 DRRFHRFNEDRVFDRRYHRPDQDPEVSEEMDERFRYESDFDRRLSRVYTNDRMHRNKRGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DRRFHRFNEDRVFDRRYHRPDQDPEVSEEMDERFRYESDFDRRLSRVYTNDRMHRNKRGN
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB7 MPPMEHDGDVIEQSNIRISSAENKSAPDNETSKSANQDTCSPFAGMLFGGEDRELIQRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MPPMEHDGDVIEQSNIRISSAENKSAPDNETSKSANQDTCSPFAGMLFGGEDRELIQRRK
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB7 EKYRLELLEQMAEQQRNKRREKDLELRVAASGAQDPEKSPDRLKQFSVAPRHFEEMIPPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EKYRLELLEQMAEQQRNKRREKDLELRVAASGAQDPEKSPDRLKQFSVAPRHFEEMIPPE
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB7 RPRIAFQTPLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSSALGEMVSPRIAPLPPPPLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RPRIAFQTPLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSSALGEMVSPRIAPLPPPPLLP
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB7 PLATNYRTPYDDAYYFYGSRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQLAQPVVNTVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PLATNYRTPYDDAYYFYGSRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQLAQPVVNTVG
510 520 530 540 550 560
610 620 630 640 650 660
pF1KB7 QNELKITSDQVINSGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREEKEEYEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QNELKITSDQVINSGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREEKEEYEAK
570 580 590 600 610 620
670 680 690 700 710 720
pF1KB7 LEAEMRTYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LEAEMRTYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSLD
630 640 650 660 670 680
730 740 750 760 770 780
pF1KB7 PNLATSNAENLEDAANKSSGHMQTQSSPFARGNVFGEPPTELQIKQQELYKNFLRFQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PNLATSNAENLEDAANKSSGHMQTQSSPFARGNVFGEPPTELQIKQQELYKNFLRFQIEE
690 700 710 720 730 740
790 800 810 820 830 840
pF1KB7 KKQREEAERERLRIAEEKEERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KKQREEAERERLRIAEEKEERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAE
750 760 770 780 790 800
850 860 870 880 890 900
pF1KB7 ERQKEAERKKKEEEEKYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQNKIASKLQRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ERQKEAERKKKEEEEKYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQNKIASKLQRPP
810 820 830 840 850 860
910 920 930 940 950 960
pF1KB7 SVDSIIRSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SVDSIIRSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQER
870 880 890 900 910 920
970 980 990 1000 1010 1020
pF1KB7 LLHMDSDDEIPIRKKERNPMDIFDMARHRLQAPVRRQSPKGLDAATFQNVHDFNELKDRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LLHMDSDDEIPIRKKERNPMDIFDMARHRLQAPVRRQSPKGLDAATFQNVHDFNELKDRD
930 940 950 960 970 980
1030 1040 1050 1060 1070 1080
pF1KB7 SETRVDLKFMYLDPPRDHHTLEIQQQALLREQQKRLNRIKMQEGAKVDLDAIPSAKVREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SETRVDLKFMYLDPPRDHHTLEIQQQALLREQQKRLNRIKMQEGAKVDLDAIPSAKVREQ
990 1000 1010 1020 1030 1040
1090 1100 1110 1120 1130 1140
pF1KB7 RMPRDDTSDFLKNSLLESDSAFIGAYGETYPAIEDDVLPPPSQLPSARERRRNKWKGLDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RMPRDDTSDFLKNSLLESDSAFIGAYGETYPAIEDDVLPPPSQLPSARERRRNKWKGLDI
1050 1060 1070 1080 1090 1100
1150 1160 1170 1180 1190 1200
pF1KB7 DSSRPNVAPDGLSLKSISSVNVDELRVRNEERMRRLNEFHNKPINTDDESSLVDPDDIMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DSSRPNVAPDGLSLKSISSVNVDELRVRNEERMRRLNEFHNKPINTDDESSLVDPDDIMK
1110 1120 1130 1140 1150 1160
1210 1220 1230 1240 1250
pF1KB7 HIGDDGSNSVATEPWLRPGTSETLKRFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HIGDDGSNSVATEPWLRPGTSETLKRFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG
1170 1180 1190 1200 1210 1220
>>CCDS78344.1 CSPP1 gene_id:79848|Hs108|chr8 (876 aa)
initn: 3426 init1: 3426 opt: 3426 Z-score: 1761.8 bits: 337.6 E(32554): 8.2e-92
Smith-Waterman score: 5725; 94.4% identity (94.5% similar) in 927 aa overlap (330-1256:1-876)
300 310 320 330 340 350
pF1KB7 PDRRFHRFNEDRVFDRRYHRPDQDPEVSEEMDERFRYESDFDRRLSRVYTNDRMHRNKRG
::::::::::::::::::::::::::::::
CCDS78 MDERFRYESDFDRRLSRVYTNDRMHRNKRG
10 20 30
360 370 380 390 400 410
pF1KB7 NMPPMEHDGDVIEQSNIRISSAENKSAPDNETSKSANQDTCSPFAGMLFGGEDRELIQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 NMPPMEHDGDVIEQSNIRISSAENKSAPDNETSKSANQDTCSPFAGMLFGGEDRELIQRR
40 50 60 70 80 90
420 430 440 450 460 470
pF1KB7 KEKYRLELLEQMAEQQRNKRREKDLELRVAASGAQDPEKSPDRLKQFSVAPRHFEEMIPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 KEKYRLELLEQMAEQQRNKRREKDLELRVAASGAQDPEKSPDRLKQFSVAPRHFEEMIPP
100 110 120 130 140 150
480 490 500 510 520 530
pF1KB7 ERPRIAFQTPLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSSALGEMVSPRIAPLPPPPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 ERPRIAFQTPLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSSALGEMVSPRIAPLPPPPLL
160 170 180 190 200 210
540 550 560 570 580 590
pF1KB7 PPLATNYRTPYDDAYYFYGSRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQLAQPVVNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 PPLATNYRTPYDDAYYFYGSRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQLAQPVVNTV
220 230 240 250 260 270
600 610 620 630 640 650
pF1KB7 GQNELKITSDQVINSGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREEKEEYEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 GQNELKITSDQVINSGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREEKEEYEA
280 290 300 310 320 330
660 670 680 690 700 710
pF1KB7 KLEAEMRTYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSL
:::::::::::::::::::::::::::::.
CCDS78 KLEAEMRTYNPWGKGGGGAPLRDAKGNLIS------------------------------
340 350 360
720 730 740 750 760 770
pF1KB7 DPNLATSNAENLEDAANKSSGHMQTQSSPFARGNVFGEPPTELQIKQQELYKNFLRFQIE
:::::::::::::::::::::::::::::::::::::::
CCDS78 ---------------------HMQTQSSPFARGNVFGEPPTELQIKQQELYKNFLRFQIE
370 380 390
780 790 800 810 820 830
pF1KB7 EKKQREEAERERLRIAEEKEERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 EKKQREEAERERLRIAEEKEERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLA
400 410 420 430 440 450
840 850 860 870 880 890
pF1KB7 EERQKEAERKKKEEEEKYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQNKIASKLQRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 EERQKEAERKKKEEEEKYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQNKIASKLQRP
460 470 480 490 500 510
900 910 920 930 940 950
pF1KB7 PSVDSIIRSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 PSVDSIIRSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQE
520 530 540 550 560 570
960 970 980 990 1000 1010
pF1KB7 RLLHMDSDDEIPIRKKERNPMDIFDMARHRLQAPVRRQSPKGLDAATFQNVHDFNELKDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 RLLHMDSDDEIPIRKKERNPMDIFDMARHRLQAPVRRQSPKGLDAATFQNVHDFNELKDR
580 590 600 610 620 630
1020 1030 1040 1050 1060 1070
pF1KB7 DSETRVDLKFMYLDPPRDHHTLEIQQQALLREQQKRLNRIKMQEGAKVDLDAIPSAKVRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 DSETRVDLKFMYLDPPRDHHTLEIQQQALLREQQKRLNRIKMQEGAKVDLDAIPSAKVRE
640 650 660 670 680 690
1080 1090 1100 1110 1120 1130
pF1KB7 QRMPRDDTSDFLKNSLLESDSAFIGAYGETYPAIEDDVLPPPSQLPSARERRRNKWKGLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 QRMPRDDTSDFLKNSLLESDSAFIGAYGETYPAIEDDVLPPPSQLPSARERRRNKWKGLD
700 710 720 730 740 750
1140 1150 1160 1170 1180 1190
pF1KB7 IDSSRPNVAPDGLSLKSISSVNVDELRVRNEERMRRLNEFHNKPINTDDESSLVDPDDIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 IDSSRPNVAPDGLSLKSISSVNVDELRVRNEERMRRLNEFHNKPINTDDESSLVDPDDIM
760 770 780 790 800 810
1200 1210 1220 1230 1240 1250
pF1KB7 KHIGDDGSNSVATEPWLRPGTSETLKRFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 KHIGDDGSNSVATEPWLRPGTSETLKRFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG
820 830 840 850 860 870
1256 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 09:01:58 2016 done: Sat Nov 5 09:01:59 2016
Total Scan time: 5.690 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]