Result of FASTA (omim) for
pF1KB7305
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7305, 810 aa
1>>>pF1KB7305 810 - 810 aa - 810 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9239+/-0.000544; mu= -5.8599+/- 0.034
mean_var=419.6220+/-88.956, 0's: 0 Z-trim(116.4): 192 B-trim: 357 in 1/55
Lambda= 0.062610
statistics sampled from 27353 (27547) to 27353 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.323), width: 16
Scan time: 13.520
The best scores are: opt bits E(85289)
NP_005656 (OMIM: 602942) ecotropic viral integrati ( 810) 5238 488.8 3.9e-137
XP_016857772 (OMIM: 602942) PREDICTED: ecotropic v ( 785) 3025 288.9 5.7e-77
XP_016857760 (OMIM: 602942) PREDICTED: ecotropic v ( 903) 3025 289.0 6.3e-77
NP_001295177 (OMIM: 602942) ecotropic viral integr ( 821) 2961 283.2 3.2e-75
XP_016857766 (OMIM: 602942) PREDICTED: ecotropic v ( 854) 2949 282.1 7e-75
XP_016857770 (OMIM: 602942) PREDICTED: ecotropic v ( 818) 2864 274.4 1.4e-72
XP_016857774 (OMIM: 602942) PREDICTED: ecotropic v ( 741) 2754 264.4 1.3e-69
XP_016857769 (OMIM: 602942) PREDICTED: ecotropic v ( 826) 2754 264.5 1.4e-69
XP_016857765 (OMIM: 602942) PREDICTED: ecotropic v ( 859) 2754 264.5 1.4e-69
XP_016857773 (OMIM: 602942) PREDICTED: ecotropic v ( 777) 2690 258.7 7.3e-68
XP_016857767 (OMIM: 602942) PREDICTED: ecotropic v ( 848) 2397 232.2 7.2e-60
XP_016857761 (OMIM: 602942) PREDICTED: ecotropic v ( 897) 2384 231.1 1.7e-59
XP_016857771 (OMIM: 602942) PREDICTED: ecotropic v ( 812) 2066 202.3 7e-51
XP_016857768 (OMIM: 602942) PREDICTED: ecotropic v ( 841) 2066 202.3 7.1e-51
XP_016857764 (OMIM: 602942) PREDICTED: ecotropic v ( 886) 2066 202.4 7.4e-51
XP_016857762 (OMIM: 602942) PREDICTED: ecotropic v ( 886) 2066 202.4 7.4e-51
XP_016857763 (OMIM: 602942) PREDICTED: ecotropic v ( 886) 2066 202.4 7.4e-51
XP_016857759 (OMIM: 602942) PREDICTED: ecotropic v ( 927) 2066 202.4 7.6e-51
XP_016857758 (OMIM: 602942) PREDICTED: ecotropic v ( 930) 2066 202.4 7.6e-51
XP_016857775 (OMIM: 602942) PREDICTED: ecotropic v ( 722) 1880 185.5 7.3e-46
XP_016857777 (OMIM: 602942) PREDICTED: ecotropic v ( 722) 1880 185.5 7.3e-46
XP_016857776 (OMIM: 602942) PREDICTED: ecotropic v ( 722) 1880 185.5 7.3e-46
XP_005245738 (OMIM: 609238) PREDICTED: rab GTPase- (1014) 898 96.9 4.7e-19
XP_011508525 (OMIM: 609238) PREDICTED: rab GTPase- (1051) 898 96.9 4.8e-19
XP_005245737 (OMIM: 609238) PREDICTED: rab GTPase- (1051) 898 96.9 4.8e-19
XP_006711756 (OMIM: 609238) PREDICTED: rab GTPase- ( 985) 891 96.3 7.1e-19
XP_016870059 (OMIM: 615882) PREDICTED: rab GTPase- ( 900) 890 96.1 7.1e-19
XP_011516744 (OMIM: 615882) PREDICTED: rab GTPase- ( 900) 890 96.1 7.1e-19
NP_036329 (OMIM: 615882) rab GTPase-activating pro (1069) 890 96.2 8e-19
XP_016870058 (OMIM: 615882) PREDICTED: rab GTPase- (1069) 890 96.2 8e-19
XP_016870057 (OMIM: 615882) PREDICTED: rab GTPase- (1069) 890 96.2 8e-19
XP_011516743 (OMIM: 615882) PREDICTED: rab GTPase- (1069) 890 96.2 8e-19
XP_011516742 (OMIM: 615882) PREDICTED: rab GTPase- (1069) 890 96.2 8e-19
XP_016870056 (OMIM: 615882) PREDICTED: rab GTPase- (1069) 890 96.2 8e-19
XP_016858483 (OMIM: 609238) PREDICTED: rab GTPase- ( 778) 837 91.3 1.8e-17
NP_055672 (OMIM: 609238) rab GTPase-activating pro ( 815) 837 91.3 1.8e-17
XP_016876373 (OMIM: 612465,616087) PREDICTED: TBC1 ( 487) 589 68.7 7.1e-11
XP_011511972 (OMIM: 609850) PREDICTED: TBC1 domain ( 494) 583 68.1 1e-10
XP_006714064 (OMIM: 609850) PREDICTED: TBC1 domain ( 546) 583 68.2 1.1e-10
XP_016876372 (OMIM: 612465,616087) PREDICTED: TBC1 (1017) 589 69.0 1.2e-10
XP_016876371 (OMIM: 612465,616087) PREDICTED: TBC1 (1054) 589 69.0 1.2e-10
XP_005266662 (OMIM: 612465,616087) PREDICTED: TBC1 (1117) 589 69.1 1.3e-10
XP_006719966 (OMIM: 612465,616087) PREDICTED: TBC1 (1140) 589 69.1 1.3e-10
NP_001273588 (OMIM: 612465,616087) TBC1 domain fam (1235) 589 69.1 1.3e-10
XP_011533633 (OMIM: 612465,616087) PREDICTED: TBC1 (1261) 589 69.1 1.4e-10
XP_005266660 (OMIM: 612465,616087) PREDICTED: TBC1 (1273) 589 69.1 1.4e-10
NP_001273587 (OMIM: 612465,616087) TBC1 domain fam (1290) 589 69.1 1.4e-10
NP_055647 (OMIM: 612465,616087) TBC1 domain family (1298) 589 69.1 1.4e-10
XP_016863410 (OMIM: 609850) PREDICTED: TBC1 domain (1039) 583 68.5 1.7e-10
XP_005262706 (OMIM: 609850) PREDICTED: TBC1 domain (1146) 583 68.5 1.9e-10
>>NP_005656 (OMIM: 602942) ecotropic viral integration s (810 aa)
initn: 5238 init1: 5238 opt: 5238 Z-score: 2583.0 bits: 488.8 E(85289): 3.9e-137
Smith-Waterman score: 5238; 100.0% identity (100.0% similar) in 810 aa overlap (1-810:1-810)
10 20 30 40 50 60
pF1KB7 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 KEMEEQVEIKRLRTENRLLKQRIETLEKHKCSSNYNEDFVLQLEKELVQARLSEAESQCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KEMEEQVEIKRLRTENRLLKQRIETLEKHKCSSNYNEDFVLQLEKELVQARLSEAESQCA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 LKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 RHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNH
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB7 LRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB7 VAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB7 PFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESET
730 740 750 760 770 780
790 800 810
pF1KB7 EDSVLETRESNQVVQKERPPRRRESYSTTV
::::::::::::::::::::::::::::::
NP_005 EDSVLETRESNQVVQKERPPRRRESYSTTV
790 800 810
>>XP_016857772 (OMIM: 602942) PREDICTED: ecotropic viral (785 aa)
initn: 4592 init1: 2909 opt: 3025 Z-score: 1502.8 bits: 288.9 E(85289): 5.7e-77
Smith-Waterman score: 4410; 92.2% identity (92.2% similar) in 766 aa overlap (1-706:1-766)
10 20 30 40 50 60
pF1KB7 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
370 380 390 400 410 420
430 440
pF1KB7 KEMEEQVEIKRLRTENRLLKQRIETLEK--------------------------------
::::::::::::::::::::::::::::
XP_016 KEMEEQVEIKRLRTENRLLKQRIETLEKESASLADRLIQGQVTRAQEAEENYLIKRELAT
430 440 450 460 470 480
450 460 470 480
pF1KB7 ----------------------------HKCSSNYNEDFVLQLEKELVQARLSEAESQCA
::::::::::::::::::::::::::::::::
XP_016 IKQQSDEASAKLEQAENTIRKLQHQQQWHKCSSNYNEDFVLQLEKELVQARLSEAESQCA
490 500 510 520 530 540
490 500 510 520 530 540
pF1KB7 LKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQ
550 560 570 580 590 600
550 560 570 580 590 600
pF1KB7 RHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNH
610 620 630 640 650 660
610 620 630 640 650 660
pF1KB7 LRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAA
670 680 690 700 710 720
670 680 690 700 710 720
pF1KB7 VAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQP
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHESTSAQVPKRPEGLL
730 740 750 760 770 780
730 740 750 760 770 780
pF1KB7 PFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESET
XP_016 RPTSF
>>XP_016857760 (OMIM: 602942) PREDICTED: ecotropic viral (903 aa)
initn: 5276 init1: 2909 opt: 3025 Z-score: 1502.1 bits: 289.0 E(85289): 6.3e-77
Smith-Waterman score: 4642; 89.0% identity (89.0% similar) in 842 aa overlap (1-749:1-842)
10 20 30 40 50 60
pF1KB7 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
370 380 390 400 410 420
430 440
pF1KB7 KEMEEQVEIKRLRTENRLLKQRIETLEK--------------------------------
::::::::::::::::::::::::::::
XP_016 KEMEEQVEIKRLRTENRLLKQRIETLEKESASLADRLIQGQVTRAQEAEENYLIKRELAT
430 440 450 460 470 480
450 460 470 480
pF1KB7 ----------------------------HKCSSNYNEDFVLQLEKELVQARLSEAESQCA
::::::::::::::::::::::::::::::::
XP_016 IKQQSDEASAKLEQAENTIRKLQHQQQWHKCSSNYNEDFVLQLEKELVQARLSEAESQCA
490 500 510 520 530 540
490 500 510 520 530 540
pF1KB7 LKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQ
550 560 570 580 590 600
550 560 570 580 590 600
pF1KB7 RHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNH
610 620 630 640 650 660
610 620 630 640 650 660
pF1KB7 LRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAA
670 680 690 700 710 720
670 680 690 700
pF1KB7 VAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHE--------------
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHEGELGREGRNVIPDW
730 740 750 760 770 780
710 720 730 740
pF1KB7 -------------------LRCLKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFID
:::::::::::::::::::::::::::::::::::::::::
XP_016 HSPHAEGNLMSGKQHSSPTLRCLKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFID
790 800 810 820 830 840
750 760 770 780 790 800
pF1KB7 NSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDSVLETRESNQVVQKERPPRRRESYS
::
XP_016 NSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDSVLETRESNQVVQKERPPRRRESYS
850 860 870 880 890 900
>--
initn: 390 init1: 390 opt: 390 Z-score: 215.8 bits: 51.0 E(85289): 2.8e-05
Smith-Waterman score: 390; 100.0% identity (100.0% similar) in 61 aa overlap (750-810:843-903)
720 730 740 750 760 770
pF1KB7 PPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESE
::::::::::::::::::::::::::::::
XP_016 PPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESE
820 830 840 850 860 870
780 790 800 810
pF1KB7 TEDSVLETRESNQVVQKERPPRRRESYSTTV
:::::::::::::::::::::::::::::::
XP_016 TEDSVLETRESNQVVQKERPPRRRESYSTTV
880 890 900
>>NP_001295177 (OMIM: 602942) ecotropic viral integratio (821 aa)
initn: 3041 init1: 2909 opt: 2961 Z-score: 1471.4 bits: 283.2 E(85289): 3.2e-75
Smith-Waterman score: 5206; 98.7% identity (98.7% similar) in 821 aa overlap (1-810:1-821)
10 20 30 40 50 60
pF1KB7 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
370 380 390 400 410 420
430 440 450 460
pF1KB7 KEMEEQVEIKRLRTENRLLKQRIETLEK-----------HKCSSNYNEDFVLQLEKELVQ
:::::::::::::::::::::::::::: :::::::::::::::::::::
NP_001 KEMEEQVEIKRLRTENRLLKQRIETLEKESASLADRLIQHKCSSNYNEDFVLQLEKELVQ
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB7 ARLSEAESQCALKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARLSEAESQCALKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELR
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB7 QQVKDLEEHWQRHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQVKDLEEHWQRHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMME
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB7 METQNQINSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METQNQINSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMA
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB7 VRLREADSIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRLREADSIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRC
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB7 LKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLD
730 740 750 760 770 780
770 780 790 800 810
pF1KB7 PAVADGSESETEDSVLETRESNQVVQKERPPRRRESYSTTV
:::::::::::::::::::::::::::::::::::::::::
NP_001 PAVADGSESETEDSVLETRESNQVVQKERPPRRRESYSTTV
790 800 810 820
>>XP_016857766 (OMIM: 602942) PREDICTED: ecotropic viral (854 aa)
initn: 3681 init1: 2909 opt: 2949 Z-score: 1465.3 bits: 282.1 E(85289): 7e-75
Smith-Waterman score: 5050; 94.8% identity (94.8% similar) in 842 aa overlap (1-798:1-842)
10 20 30 40 50 60
pF1KB7 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
370 380 390 400 410 420
430 440 450 460
pF1KB7 KEMEEQVEIKRLRTENRLLKQRIETLEK-----------HKCSSNYNEDFVLQLEKELVQ
:::::::::::::::::::::::::::: :::::::::::::::::::::
XP_016 KEMEEQVEIKRLRTENRLLKQRIETLEKESASLADRLIQHKCSSNYNEDFVLQLEKELVQ
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB7 ARLSEAESQCALKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARLSEAESQCALKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELR
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB7 QQVKDLEEHWQRHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQVKDLEEHWQRHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMME
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB7 METQNQINSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METQNQINSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMA
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB7 VRLREADSIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHE---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRLREADSIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHEGEL
670 680 690 700 710 720
710 720 730
pF1KB7 ------------------------------LRCLKGQRGFSGQPPFDGIHIVNHLIGDDE
::::::::::::::::::::::::::::::
XP_016 GREGRNVIPDWHSPHAEGNLMSGKQHSSPTLRCLKGQRGFSGQPPFDGIHIVNHLIGDDE
730 740 750 760 770 780
740 750 760 770 780 790
pF1KB7 SFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDSVLETRESNQVVQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDSVLETRESNQVVQK
790 800 810 820 830 840
800 810
pF1KB7 ERPPRRRESYSTTV
::
XP_016 ERPPRRRESYSTTV
850
>>XP_016857770 (OMIM: 602942) PREDICTED: ecotropic viral (818 aa)
initn: 2939 init1: 2807 opt: 2864 Z-score: 1424.0 bits: 274.4 E(85289): 1.4e-72
Smith-Waterman score: 5109; 97.8% identity (98.2% similar) in 814 aa overlap (8-810:5-818)
10 20 30 40 50 60
pF1KB7 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
:... :: :::::::::::::::::::::::::::::::::::::::::::
XP_016 MTSGASLKLTSGFPVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSASSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB7 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB7 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGYCQGSAFIVGLLLMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB7 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLPELFVHFQSQSFHTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALL
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB7 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMNQAELMQLDMEGMLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKT
360 370 380 390 400 410
430 440 450 460
pF1KB7 KEMEEQVEIKRLRTENRLLKQRIETLEK-----------HKCSSNYNEDFVLQLEKELVQ
:::::::::::::::::::::::::::: :::::::::::::::::::::
XP_016 KEMEEQVEIKRLRTENRLLKQRIETLEKESASLADRLIQHKCSSNYNEDFVLQLEKELVQ
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB7 ARLSEAESQCALKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARLSEAESQCALKEMQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELR
480 490 500 510 520 530
530 540 550 560 570 580
pF1KB7 QQVKDLEEHWQRHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQVKDLEEHWQRHLARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMME
540 550 560 570 580 590
590 600 610 620 630 640
pF1KB7 METQNQINSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METQNQINSNHLRRAEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMA
600 610 620 630 640 650
650 660 670 680 690 700
pF1KB7 VRLREADSIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRLREADSIAAVAELRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRC
660 670 680 690 700 710
710 720 730 740 750 760
pF1KB7 LKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLD
720 730 740 750 760 770
770 780 790 800 810
pF1KB7 PAVADGSESETEDSVLETRESNQVVQKERPPRRRESYSTTV
:::::::::::::::::::::::::::::::::::::::::
XP_016 PAVADGSESETEDSVLETRESNQVVQKERPPRRRESYSTTV
780 790 800 810
>>XP_016857774 (OMIM: 602942) PREDICTED: ecotropic viral (741 aa)
initn: 4259 init1: 2638 opt: 2754 Z-score: 1370.9 bits: 264.4 E(85289): 1.3e-69
Smith-Waterman score: 4139; 91.7% identity (91.7% similar) in 722 aa overlap (45-706:1-722)
20 30 40 50 60 70
pF1KB7 GKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTSSSTTLSTPALSPSS
::::::::::::::::::::::::::::::
XP_016 MASQVASPSTSLHTTSSSTTLSTPALSPSS
10 20 30
80 90 100 110 120 130
pF1KB7 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB7 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB7 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB7 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB7 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB7 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
340 350 360 370 380 390
440
pF1KB7 ENRLLKQRIETLEK----------------------------------------------
::::::::::::::
XP_016 ENRLLKQRIETLEKESASLADRLIQGQVTRAQEAEENYLIKRELATIKQQSDEASAKLEQ
400 410 420 430 440 450
450 460 470 480 490
pF1KB7 --------------HKCSSNYNEDFVLQLEKELVQARLSEAESQCALKEMQDKVLDIEKR
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AENTIRKLQHQQQWHKCSSNYNEDFVLQLEKELVQARLSEAESQCALKEMQDKVLDIEKR
460 470 480 490 500 510
500 510 520 530 540 550
pF1KB7 NNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHLARTTGRWKDPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHLARTTGRWKDPP
520 530 540 550 560 570
560 570 580 590 600 610
pF1KB7 KKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRRAEQEVISLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRRAEQEVISLQEK
580 590 600 610 620 630
620 630 640 650 660 670
pF1KB7 VQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAELRQHIAELEIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAELRQHIAELEIQ
640 650 660 670 680 690
680 690 700 710 720 730
pF1KB7 KEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQPPFDGIHIVNHLIGD
::::::::::::::::::::::::::::::::
XP_016 KEEGKLQGQLNKSDSNQYIGELKDQIAELNHESTSAQVPKRPEGLLRPTSF
700 710 720 730 740
740 750 760 770 780 790
pF1KB7 DESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDSVLETRESNQVV
>>XP_016857769 (OMIM: 602942) PREDICTED: ecotropic viral (826 aa)
initn: 4957 init1: 2638 opt: 2754 Z-score: 1370.3 bits: 264.5 E(85289): 1.4e-69
Smith-Waterman score: 4663; 92.5% identity (92.5% similar) in 798 aa overlap (45-782:1-798)
20 30 40 50 60 70
pF1KB7 GKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTSSSTTLSTPALSPSS
::::::::::::::::::::::::::::::
XP_016 MASQVASPSTSLHTTSSSTTLSTPALSPSS
10 20 30
80 90 100 110 120 130
pF1KB7 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB7 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB7 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB7 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB7 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB7 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
340 350 360 370 380 390
440
pF1KB7 ENRLLKQRIETLEK----------------------------------------------
::::::::::::::
XP_016 ENRLLKQRIETLEKESASLADRLIQGQVTRAQEAEENYLIKRELATIKQQSDEASAKLEQ
400 410 420 430 440 450
450 460 470 480 490
pF1KB7 --------------HKCSSNYNEDFVLQLEKELVQARLSEAESQCALKEMQDKVLDIEKR
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AENTIRKLQHQQQWHKCSSNYNEDFVLQLEKELVQARLSEAESQCALKEMQDKVLDIEKR
460 470 480 490 500 510
500 510 520 530 540 550
pF1KB7 NNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHLARTTGRWKDPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHLARTTGRWKDPP
520 530 540 550 560 570
560 570 580 590 600 610
pF1KB7 KKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRRAEQEVISLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRRAEQEVISLQEK
580 590 600 610 620 630
620 630 640 650 660 670
pF1KB7 VQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAELRQHIAELEIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAELRQHIAELEIQ
640 650 660 670 680 690
680 690 700 710 720 730
pF1KB7 KEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQPPFDGIHIVNHLIGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQPPFDGIHIVNHLIGD
700 710 720 730 740 750
740 750 760 770 780 790
pF1KB7 DESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDSVLETRESNQVV
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDSVLETRESNQVV
760 770 780 790 800 810
800 810
pF1KB7 QKERPPRRRESYSTTV
XP_016 QKERPPRRRESYSTTV
820
>>XP_016857765 (OMIM: 602942) PREDICTED: ecotropic viral (859 aa)
initn: 4943 init1: 2638 opt: 2754 Z-score: 1370.1 bits: 264.5 E(85289): 1.4e-69
Smith-Waterman score: 4371; 88.3% identity (88.3% similar) in 798 aa overlap (45-749:1-798)
20 30 40 50 60 70
pF1KB7 GKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTSSSTTLSTPALSPSS
::::::::::::::::::::::::::::::
XP_016 MASQVASPSTSLHTTSSSTTLSTPALSPSS
10 20 30
80 90 100 110 120 130
pF1KB7 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB7 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB7 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB7 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB7 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB7 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
340 350 360 370 380 390
440
pF1KB7 ENRLLKQRIETLEK----------------------------------------------
::::::::::::::
XP_016 ENRLLKQRIETLEKESASLADRLIQGQVTRAQEAEENYLIKRELATIKQQSDEASAKLEQ
400 410 420 430 440 450
450 460 470 480 490
pF1KB7 --------------HKCSSNYNEDFVLQLEKELVQARLSEAESQCALKEMQDKVLDIEKR
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AENTIRKLQHQQQWHKCSSNYNEDFVLQLEKELVQARLSEAESQCALKEMQDKVLDIEKR
460 470 480 490 500 510
500 510 520 530 540 550
pF1KB7 NNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHLARTTGRWKDPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHLARTTGRWKDPP
520 530 540 550 560 570
560 570 580 590 600 610
pF1KB7 KKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRRAEQEVISLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRRAEQEVISLQEK
580 590 600 610 620 630
620 630 640 650 660 670
pF1KB7 VQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAELRQHIAELEIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAELRQHIAELEIQ
640 650 660 670 680 690
680 690 700
pF1KB7 KEEGKLQGQLNKSDSNQYIGELKDQIAELNHE----------------------------
::::::::::::::::::::::::::::::::
XP_016 KEEGKLQGQLNKSDSNQYIGELKDQIAELNHEGELGREGRNVIPDWHSPHAEGNLMSGKQ
700 710 720 730 740 750
710 720 730 740 750 760
pF1KB7 -----LRCLKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHG
:::::::::::::::::::::::::::::::::::::::::::
XP_016 HSSPTLRCLKGQRGFSGQPPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHG
760 770 780 790 800 810
770 780 790 800 810
pF1KB7 KSGSMSLDPAVADGSESETEDSVLETRESNQVVQKERPPRRRESYSTTV
XP_016 KSGSMSLDPAVADGSESETEDSVLETRESNQVVQKERPPRRRESYSTTV
820 830 840 850
>--
initn: 390 init1: 390 opt: 390 Z-score: 216.0 bits: 51.0 E(85289): 2.7e-05
Smith-Waterman score: 390; 100.0% identity (100.0% similar) in 61 aa overlap (750-810:799-859)
720 730 740 750 760 770
pF1KB7 PPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESE
::::::::::::::::::::::::::::::
XP_016 PPFDGIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESE
770 780 790 800 810 820
780 790 800 810
pF1KB7 TEDSVLETRESNQVVQKERPPRRRESYSTTV
:::::::::::::::::::::::::::::::
XP_016 TEDSVLETRESNQVVQKERPPRRRESYSTTV
830 840 850
>>XP_016857773 (OMIM: 602942) PREDICTED: ecotropic viral (777 aa)
initn: 2804 init1: 2638 opt: 2690 Z-score: 1339.4 bits: 258.7 E(85289): 7.3e-68
Smith-Waterman score: 4935; 98.6% identity (98.6% similar) in 777 aa overlap (45-810:1-777)
20 30 40 50 60 70
pF1KB7 GKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTSSSTTLSTPALSPSS
::::::::::::::::::::::::::::::
XP_016 MASQVASPSTSLHTTSSSTTLSTPALSPSS
10 20 30
80 90 100 110 120 130
pF1KB7 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVSSSSASSNLSHLEEDS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB7 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WILWGRIVNEWEDVRKKKEKQVKELVHKGIPHHFRAIVWQLLCSAQSMPIKDQYSELLKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB7 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLL
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB7 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMQMPEEEAFCVFVKLMQDYRLRELFKPSMAELGLCMYQFECMIQEHLPELFVHFQSQSF
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB7 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTSMYASSWFLTIFLTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEG
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB7 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLQHFQKVIPHQFDGVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRT
340 350 360 370 380 390
440 450 460 470 480
pF1KB7 ENRLLKQRIETLEK-----------HKCSSNYNEDFVLQLEKELVQARLSEAESQCALKE
:::::::::::::: :::::::::::::::::::::::::::::::::::
XP_016 ENRLLKQRIETLEKESASLADRLIQHKCSSNYNEDFVLQLEKELVQARLSEAESQCALKE
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB7 MQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQDKVLDIEKRNNSLPDENNIARLQEELIAVKLREAEAIMGLKELRQQVKDLEEHWQRHL
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB7 ARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARTTGRWKDPPKKNAMNELQDELMTIRLREAETQAEIREIKQRMMEMETQNQINSNHLRR
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB7 AEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEQEVISLQEKVQYLSAQNKGLLTQLSEAKRKQAEIECKNKEEVMAVRLREADSIAAVAE
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB7 LRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQPPFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRQHIAELEIQKEEGKLQGQLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQPPFD
640 650 660 670 680 690
730 740 750 760 770 780
pF1KB7 GIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GIHIVNHLIGDDESFHSSDEDFIDNSLQETGVGFPLHGKSGSMSLDPAVADGSESETEDS
700 710 720 730 740 750
790 800 810
pF1KB7 VLETRESNQVVQKERPPRRRESYSTTV
:::::::::::::::::::::::::::
XP_016 VLETRESNQVVQKERPPRRRESYSTTV
760 770
810 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:15:46 2016 done: Sat Nov 5 22:15:48 2016
Total Scan time: 13.520 Total Display time: 0.280
Function used was FASTA [36.3.4 Apr, 2011]