Result of FASTA (omim) for
pF1KB7303
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7303, 1288 aa
1>>>pF1KB7303 1288 - 1288 aa - 1288 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5334+/-0.000339; mu= 24.2237+/- 0.021
mean_var=94.4221+/-19.066, 0's: 0 Z-trim(116.4): 2 B-trim: 442 in 1/57
Lambda= 0.131989
statistics sampled from 27483 (27485) to 27483 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.322), width: 16
Scan time: 17.420
The best scores are: opt bits E(85289)
NP_060040 (OMIM: 260005,614243) 5-oxoprolinase [Ho (1288) 8671 1662.1 0
XP_011515262 (OMIM: 260005,614243) PREDICTED: 5-ox (1384) 8671 1662.1 0
>>NP_060040 (OMIM: 260005,614243) 5-oxoprolinase [Homo s (1288 aa)
initn: 8671 init1: 8671 opt: 8671 Z-score: 8916.6 bits: 1662.1 E(85289): 0
Smith-Waterman score: 8671; 100.0% identity (100.0% similar) in 1288 aa overlap (1-1288:1-1288)
10 20 30 40 50 60
pF1KB7 MGSPEGRFHFAIDRGGTFTDVFAQCPGGHVRVLKLLSEDPANYADAPTEGIRRILEQEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MGSPEGRFHFAIDRGGTFTDVFAQCPGGHVRVLKLLSEDPANYADAPTEGIRRILEQEAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 MLLPRDQPLDSSHIASIRMGTTVATNALLERKGERVALLVTRGFRDLLHIGTQARGDLFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MLLPRDQPLDSSHIASIRMGTTVATNALLERKGERVALLVTRGFRDLLHIGTQARGDLFD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LAVPMPEVLYEEVLEVDERVVLHRGEAGTGTPVKGRTGDLLEVQQPVDLGALRGKLEGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LAVPMPEVLYEEVLEVDERVVLHRGEAGTGTPVKGRTGDLLEVQQPVDLGALRGKLEGLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SRGIRSLAVVLMHSYTWAQHEQQVGVLARELGFTHVSLSSEAMPMVRIVPRGHTACADAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SRGIRSLAVVLMHSYTWAQHEQQVGVLARELGFTHVSLSSEAMPMVRIVPRGHTACADAY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LTPAIQRYVQGFCRGFQGQLKDVQVLFMRSDGGLAPMDTFSGSSAVLSGPAGGVVGYSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LTPAIQRYVQGFCRGFQGQLKDVQVLFMRSDGGLAPMDTFSGSSAVLSGPAGGVVGYSAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 TYQQEGGQPVIGFDMGGTSTDVSRYAGEFEHVFEASTAGVTLQAPQLDINTVAAGGGSRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TYQQEGGQPVIGFDMGGTSTDVSRYAGEFEHVFEASTAGVTLQAPQLDINTVAAGGGSRL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 FFRSGLFVVGPESAGAHPGPACYRKGGPVTVTDANLVLGRLLPASFPCIFGPGENQPLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 FFRSGLFVVGPESAGAHPGPACYRKGGPVTVTDANLVLGRLLPASFPCIFGPGENQPLSP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 EASRKALEAVATEVNSFLTNGPCPASPLSLEEVAMGFVRVANEAMCRPIRALTQARGHDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EASRKALEAVATEVNSFLTNGPCPASPLSLEEVAMGFVRVANEAMCRPIRALTQARGHDP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 SAHVLACFGGAGGQHACAIARALGMDTVHIHRHSGLLSALGLALADVVHEAQEPCSLLYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SAHVLACFGGAGGQHACAIARALGMDTVHIHRHSGLLSALGLALADVVHEAQEPCSLLYA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 PETFVQLDQRLSRLEEQCVDALQAQGFPRSQISTESFLHLRYQGTDCALMVSAHQHPATA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PETFVQLDQRLSRLEEQCVDALQAQGFPRSQISTESFLHLRYQGTDCALMVSAHQHPATA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB7 RSPRAGDFGAAFVERYMREFGFVIPERPVVVDDVRVRGTGRSGLRLEDAPKAQTGPPRVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RSPRAGDFGAAFVERYMREFGFVIPERPVVVDDVRVRGTGRSGLRLEDAPKAQTGPPRVD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB7 KMTQCYFEGGYQETPVYLLAELGYGHKLHGPCLIIDSNSTILVEPGCQAEVTKTGDICIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KMTQCYFEGGYQETPVYLLAELGYGHKLHGPCLIIDSNSTILVEPGCQAEVTKTGDICIS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB7 VGAEVPGTVGPQLDPIQLSIFSHRFMSIAEQMGRILQRTAISTNIKERLDFSCALFGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VGAEVPGTVGPQLDPIQLSIFSHRFMSIAEQMGRILQRTAISTNIKERLDFSCALFGPDG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB7 GLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVITPVFW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVITPVFW
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB7 PGQTRPVFYVASRGHHADIGGITPGSMPPHSTMLQQEGAVFLSFKLVQGGVFQEEAVTEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PGQTRPVFYVASRGHHADIGGITPGSMPPHSTMLQQEGAVFLSFKLVQGGVFQEEAVTEA
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB7 LRAPGKVPNCSGTRNLHDNLSDLRAQVAANQKGIQLVGELIGQYGLDVVQAYMGHIQANA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LRAPGKVPNCSGTRNLHDNLSDLRAQVAANQKGIQLVGELIGQYGLDVVQAYMGHIQANA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB7 ELAVRDMLRAFGTSRQARGLPLEVSSEDHMDDGSPIRLRVQISLSQGSAVFDFSGTGPEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ELAVRDMLRAFGTSRQARGLPLEVSSEDHMDDGSPIRLRVQISLSQGSAVFDFSGTGPEV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB7 FGNLNAPRAVTLSALIYCLRCLVGRDIPLNQGCLAPVRVVIPRGSILDPSPEAAVVGGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 FGNLNAPRAVTLSALIYCLRCLVGRDIPLNQGCLAPVRVVIPRGSILDPSPEAAVVGGNV
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB7 LTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGAGPSWHGRSGVHSHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGAGPSWHGRSGVHSHM
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB7 TNTRITDPEILESRYPVILRRFELRRGSGGRGRFRGGDGVTRELLFREEALLSVLTERRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TNTRITDPEILESRYPVILRRFELRRGSGGRGRFRGGDGVTRELLFREEALLSVLTERRA
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB7 FRPYGLHGGEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 FRPYGLHGGEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPA
1210 1220 1230 1240 1250 1260
1270 1280
pF1KB7 PPPGSPPQALAFPEHGSVYEYRRAQEAV
::::::::::::::::::::::::::::
NP_060 PPPGSPPQALAFPEHGSVYEYRRAQEAV
1270 1280
>>XP_011515262 (OMIM: 260005,614243) PREDICTED: 5-oxopro (1384 aa)
initn: 8671 init1: 8671 opt: 8671 Z-score: 8916.2 bits: 1662.1 E(85289): 0
Smith-Waterman score: 8671; 100.0% identity (100.0% similar) in 1288 aa overlap (1-1288:97-1384)
10 20 30
pF1KB7 MGSPEGRFHFAIDRGGTFTDVFAQCPGGHV
::::::::::::::::::::::::::::::
XP_011 RRRTIKFKNAERVFPGLPAEELLWDSSPTTMGSPEGRFHFAIDRGGTFTDVFAQCPGGHV
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB7 RVLKLLSEDPANYADAPTEGIRRILEQEAGMLLPRDQPLDSSHIASIRMGTTVATNALLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVLKLLSEDPANYADAPTEGIRRILEQEAGMLLPRDQPLDSSHIASIRMGTTVATNALLE
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB7 RKGERVALLVTRGFRDLLHIGTQARGDLFDLAVPMPEVLYEEVLEVDERVVLHRGEAGTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKGERVALLVTRGFRDLLHIGTQARGDLFDLAVPMPEVLYEEVLEVDERVVLHRGEAGTG
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB7 TPVKGRTGDLLEVQQPVDLGALRGKLEGLLSRGIRSLAVVLMHSYTWAQHEQQVGVLARE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPVKGRTGDLLEVQQPVDLGALRGKLEGLLSRGIRSLAVVLMHSYTWAQHEQQVGVLARE
250 260 270 280 290 300
220 230 240 250 260 270
pF1KB7 LGFTHVSLSSEAMPMVRIVPRGHTACADAYLTPAIQRYVQGFCRGFQGQLKDVQVLFMRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGFTHVSLSSEAMPMVRIVPRGHTACADAYLTPAIQRYVQGFCRGFQGQLKDVQVLFMRS
310 320 330 340 350 360
280 290 300 310 320 330
pF1KB7 DGGLAPMDTFSGSSAVLSGPAGGVVGYSATTYQQEGGQPVIGFDMGGTSTDVSRYAGEFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGGLAPMDTFSGSSAVLSGPAGGVVGYSATTYQQEGGQPVIGFDMGGTSTDVSRYAGEFE
370 380 390 400 410 420
340 350 360 370 380 390
pF1KB7 HVFEASTAGVTLQAPQLDINTVAAGGGSRLFFRSGLFVVGPESAGAHPGPACYRKGGPVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HVFEASTAGVTLQAPQLDINTVAAGGGSRLFFRSGLFVVGPESAGAHPGPACYRKGGPVT
430 440 450 460 470 480
400 410 420 430 440 450
pF1KB7 VTDANLVLGRLLPASFPCIFGPGENQPLSPEASRKALEAVATEVNSFLTNGPCPASPLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTDANLVLGRLLPASFPCIFGPGENQPLSPEASRKALEAVATEVNSFLTNGPCPASPLSL
490 500 510 520 530 540
460 470 480 490 500 510
pF1KB7 EEVAMGFVRVANEAMCRPIRALTQARGHDPSAHVLACFGGAGGQHACAIARALGMDTVHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEVAMGFVRVANEAMCRPIRALTQARGHDPSAHVLACFGGAGGQHACAIARALGMDTVHI
550 560 570 580 590 600
520 530 540 550 560 570
pF1KB7 HRHSGLLSALGLALADVVHEAQEPCSLLYAPETFVQLDQRLSRLEEQCVDALQAQGFPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HRHSGLLSALGLALADVVHEAQEPCSLLYAPETFVQLDQRLSRLEEQCVDALQAQGFPRS
610 620 630 640 650 660
580 590 600 610 620 630
pF1KB7 QISTESFLHLRYQGTDCALMVSAHQHPATARSPRAGDFGAAFVERYMREFGFVIPERPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QISTESFLHLRYQGTDCALMVSAHQHPATARSPRAGDFGAAFVERYMREFGFVIPERPVV
670 680 690 700 710 720
640 650 660 670 680 690
pF1KB7 VDDVRVRGTGRSGLRLEDAPKAQTGPPRVDKMTQCYFEGGYQETPVYLLAELGYGHKLHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDDVRVRGTGRSGLRLEDAPKAQTGPPRVDKMTQCYFEGGYQETPVYLLAELGYGHKLHG
730 740 750 760 770 780
700 710 720 730 740 750
pF1KB7 PCLIIDSNSTILVEPGCQAEVTKTGDICISVGAEVPGTVGPQLDPIQLSIFSHRFMSIAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PCLIIDSNSTILVEPGCQAEVTKTGDICISVGAEVPGTVGPQLDPIQLSIFSHRFMSIAE
790 800 810 820 830 840
760 770 780 790 800 810
pF1KB7 QMGRILQRTAISTNIKERLDFSCALFGPDGGLVSNAPHIPVHLGAMQETVQFQIQHLGAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QMGRILQRTAISTNIKERLDFSCALFGPDGGLVSNAPHIPVHLGAMQETVQFQIQHLGAD
850 860 870 880 890 900
820 830 840 850 860 870
pF1KB7 LHPGDVLLSNHPSAGGSHLPDLTVITPVFWPGQTRPVFYVASRGHHADIGGITPGSMPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHPGDVLLSNHPSAGGSHLPDLTVITPVFWPGQTRPVFYVASRGHHADIGGITPGSMPPH
910 920 930 940 950 960
880 890 900 910 920 930
pF1KB7 STMLQQEGAVFLSFKLVQGGVFQEEAVTEALRAPGKVPNCSGTRNLHDNLSDLRAQVAAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STMLQQEGAVFLSFKLVQGGVFQEEAVTEALRAPGKVPNCSGTRNLHDNLSDLRAQVAAN
970 980 990 1000 1010 1020
940 950 960 970 980 990
pF1KB7 QKGIQLVGELIGQYGLDVVQAYMGHIQANAELAVRDMLRAFGTSRQARGLPLEVSSEDHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKGIQLVGELIGQYGLDVVQAYMGHIQANAELAVRDMLRAFGTSRQARGLPLEVSSEDHM
1030 1040 1050 1060 1070 1080
1000 1010 1020 1030 1040 1050
pF1KB7 DDGSPIRLRVQISLSQGSAVFDFSGTGPEVFGNLNAPRAVTLSALIYCLRCLVGRDIPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDGSPIRLRVQISLSQGSAVFDFSGTGPEVFGNLNAPRAVTLSALIYCLRCLVGRDIPLN
1090 1100 1110 1120 1130 1140
1060 1070 1080 1090 1100 1110
pF1KB7 QGCLAPVRVVIPRGSILDPSPEAAVVGGNVLTSQRVVDVILGAFGACAASQGCMNNVTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGCLAPVRVVIPRGSILDPSPEAAVVGGNVLTSQRVVDVILGAFGACAASQGCMNNVTLG
1150 1160 1170 1180 1190 1200
1120 1130 1140 1150 1160 1170
pF1KB7 NAHMGYYETVAGGAGAGPSWHGRSGVHSHMTNTRITDPEILESRYPVILRRFELRRGSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NAHMGYYETVAGGAGAGPSWHGRSGVHSHMTNTRITDPEILESRYPVILRRFELRRGSGG
1210 1220 1230 1240 1250 1260
1180 1190 1200 1210 1220 1230
pF1KB7 RGRFRGGDGVTRELLFREEALLSVLTERRAFRPYGLHGGEPGARGLNLLIRKNGRTVNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGRFRGGDGVTRELLFREEALLSVLTERRAFRPYGLHGGEPGARGLNLLIRKNGRTVNLG
1270 1280 1290 1300 1310 1320
1240 1250 1260 1270 1280
pF1KB7 GKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQALAFPEHGSVYEYRRAQEAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQALAFPEHGSVYEYRRAQEAV
1330 1340 1350 1360 1370 1380
1288 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:47:45 2016 done: Fri Nov 4 06:47:48 2016
Total Scan time: 17.420 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]