FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7221, 207 aa
  1>>>pF1KB7221 207 - 207 aa - 207 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0739+/-0.000899; mu= 11.2050+/- 0.054
 mean_var=92.9602+/-18.887, 0's: 0 Z-trim(108.1): 23  B-trim: 531 in 1/52
 Lambda= 0.133023
 statistics sampled from 9986 (10007) to 9986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.307), width:  16
 Scan time:  2.060

The best scores are:                                      opt bits E(32554)
CCDS6521.1 IFNK gene_id:56832|Hs108|chr9           ( 207) 1410 280.1 6.5e-76


>>CCDS6521.1 IFNK gene_id:56832|Hs108|chr9                (207 aa)
 initn: 1410 init1: 1410 opt: 1410  Z-score: 1476.4  bits: 280.1 E(32554): 6.5e-76
Smith-Waterman score: 1410; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207)

               10        20        30        40        50        60
pF1KB7 MSTKPDMIQKCLWLEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MSTKPDMIQKCLWLEILMGIFIAGTLSLDCNLLNVHLRRVTWQNLRHLSSMSNSFPVECL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 RENIAFELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 RENIAFELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFSQHTFKYWKERHLKQIQIGLDQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 QAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 QAEYLNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSD
              130       140       150       160       170       180

              190       200       
pF1KB7 CAWEIVRVEIRRCLYYFYKFTALFRRK
       :::::::::::::::::::::::::::
CCDS65 CAWEIVRVEIRRCLYYFYKFTALFRRK
              190       200       




207 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:05:36 2016 done: Fri Nov  4 06:05:36 2016
 Total Scan time:  2.060 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]