Result of FASTA (omim) for
pF1KB7217
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7217, 326 aa
1>>>pF1KB7217 326 - 326 aa - 326 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0596+/-0.000404; mu= 17.5753+/- 0.025
mean_var=76.4847+/-15.364, 0's: 0 Z-trim(112.6): 44 B-trim: 0 in 0/56
Lambda= 0.146652
statistics sampled from 21522 (21564) to 21522 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.253), width: 16
Scan time: 6.390
The best scores are: opt bits E(85289)
NP_653261 (OMIM: 611575) sphingomyelin synthase-re ( 326) 2261 488.0 1.2e-137
XP_011537614 (OMIM: 611575) PREDICTED: sphingomyel ( 415) 2180 470.9 2e-132
XP_016871228 (OMIM: 611575) PREDICTED: sphingomyel ( 415) 2180 470.9 2e-132
NP_001167627 (OMIM: 611575) sphingomyelin synthase ( 415) 2180 470.9 2e-132
XP_005269598 (OMIM: 611575) PREDICTED: sphingomyel ( 415) 2180 470.9 2e-132
XP_016871227 (OMIM: 611575) PREDICTED: sphingomyel ( 429) 2180 470.9 2e-132
XP_011537613 (OMIM: 611575) PREDICTED: sphingomyel ( 478) 2180 471.0 2.2e-132
XP_016863330 (OMIM: 611574) PREDICTED: phosphatidy ( 242) 560 128.0 2e-29
XP_011530002 (OMIM: 611574) PREDICTED: phosphatidy ( 365) 560 128.1 2.7e-29
XP_011530001 (OMIM: 611574) PREDICTED: phosphatidy ( 365) 560 128.1 2.7e-29
XP_011530004 (OMIM: 611574) PREDICTED: phosphatidy ( 365) 560 128.1 2.7e-29
XP_011530003 (OMIM: 611574) PREDICTED: phosphatidy ( 365) 560 128.1 2.7e-29
XP_016863329 (OMIM: 611574) PREDICTED: phosphatidy ( 365) 560 128.1 2.7e-29
NP_001129729 (OMIM: 611574) phosphatidylcholine:ce ( 365) 560 128.1 2.7e-29
NP_689834 (OMIM: 611574) phosphatidylcholine:ceram ( 365) 560 128.1 2.7e-29
XP_011530000 (OMIM: 611574) PREDICTED: phosphatidy ( 365) 560 128.1 2.7e-29
XP_016863328 (OMIM: 611574) PREDICTED: phosphatidy ( 365) 560 128.1 2.7e-29
NP_001129730 (OMIM: 611574) phosphatidylcholine:ce ( 365) 560 128.1 2.7e-29
XP_011537884 (OMIM: 611573) PREDICTED: phosphatidy ( 413) 559 128.0 3.5e-29
NP_671512 (OMIM: 611573) phosphatidylcholine:ceram ( 413) 559 128.0 3.5e-29
XP_011537885 (OMIM: 611573) PREDICTED: phosphatidy ( 413) 559 128.0 3.5e-29
XP_005269732 (OMIM: 611573) PREDICTED: phosphatidy ( 413) 559 128.0 3.5e-29
XP_011537886 (OMIM: 611573) PREDICTED: phosphatidy ( 225) 248 61.9 1.4e-09
>>NP_653261 (OMIM: 611575) sphingomyelin synthase-relate (326 aa)
initn: 2261 init1: 2261 opt: 2261 Z-score: 2592.5 bits: 488.0 E(85289): 1.2e-137
Smith-Waterman score: 2261; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KB7 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
250 260 270 280 290 300
310 320
pF1KB7 HTVVLTMLNFFVTECKYLFSASMRIR
::::::::::::::::::::::::::
NP_653 HTVVLTMLNFFVTECKYLFSASMRIR
310 320
>>XP_011537614 (OMIM: 611575) PREDICTED: sphingomyelin s (415 aa)
initn: 2180 init1: 2180 opt: 2180 Z-score: 2498.4 bits: 470.9 E(85289): 2e-132
Smith-Waterman score: 2180; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KB7 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
250 260 270 280 290 300
310 320
pF1KB7 HTVVLTMLNFFVTECKYLFSASMRIR
::::::::::::::
XP_011 HTVVLTMLNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLF
310 320 330 340 350 360
>>XP_016871228 (OMIM: 611575) PREDICTED: sphingomyelin s (415 aa)
initn: 2180 init1: 2180 opt: 2180 Z-score: 2498.4 bits: 470.9 E(85289): 2e-132
Smith-Waterman score: 2180; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KB7 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
250 260 270 280 290 300
310 320
pF1KB7 HTVVLTMLNFFVTECKYLFSASMRIR
::::::::::::::
XP_016 HTVVLTMLNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLF
310 320 330 340 350 360
>>NP_001167627 (OMIM: 611575) sphingomyelin synthase-rel (415 aa)
initn: 2180 init1: 2180 opt: 2180 Z-score: 2498.4 bits: 470.9 E(85289): 2e-132
Smith-Waterman score: 2180; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KB7 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
250 260 270 280 290 300
310 320
pF1KB7 HTVVLTMLNFFVTECKYLFSASMRIR
::::::::::::::
NP_001 HTVVLTMLNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLF
310 320 330 340 350 360
>>XP_005269598 (OMIM: 611575) PREDICTED: sphingomyelin s (415 aa)
initn: 2180 init1: 2180 opt: 2180 Z-score: 2498.4 bits: 470.9 E(85289): 2e-132
Smith-Waterman score: 2180; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KB7 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
250 260 270 280 290 300
310 320
pF1KB7 HTVVLTMLNFFVTECKYLFSASMRIR
::::::::::::::
XP_005 HTVVLTMLNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLF
310 320 330 340 350 360
>>XP_016871227 (OMIM: 611575) PREDICTED: sphingomyelin s (429 aa)
initn: 2180 init1: 2180 opt: 2180 Z-score: 2498.3 bits: 470.9 E(85289): 2e-132
Smith-Waterman score: 2180; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:15-328)
10 20 30 40
pF1KB7 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLT
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGVTWNPLVAAEEEMAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 LTEYDLRSPPLEIKVLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTEYDLRSPPLEIKVLGDIKRLMLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 TDWLCNGELSHDCDGPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDWLCNGELSHDCDGPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFT
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB7 SFIMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFIMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB7 ILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMT
250 260 270 280 290 300
290 300 310 320
pF1KB7 LTGVHTCGDYMFSGHTVVLTMLNFFVTECKYLFSASMRIR
::::::::::::::::::::::::::::
XP_016 LTGVHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYS
310 320 330 340 350 360
>>XP_011537613 (OMIM: 611575) PREDICTED: sphingomyelin s (478 aa)
initn: 2180 init1: 2180 opt: 2180 Z-score: 2497.6 bits: 471.0 E(85289): 2.2e-132
Smith-Waterman score: 2180; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:64-377)
10 20 30
pF1KB7 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYV
::::::::::::::::::::::::::::::
XP_011 RAPDSDGGSDADSEVGPGSPTRTAEAAEEEMAGPNQLCIRRWTTKHVAVWLKDEGFFEYV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB7 DILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRLMLSVRKLQKIHIDVLEEMGYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRLMLSVRKLQKIHIDVLEEMGYNS
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB7 DSPMGSMTPFISALQSTDWLCNGELSHDCDGPITDLNSDQYQYMNGKNKHSVRRLDPEYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPMGSMTPFISALQSTDWLCNGELSHDCDGPITDLNSDQYQYMNGKNKHSVRRLDPEYW
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB7 KTILSCIYVFIVFGFTSFIMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTILSCIYVFIVFGFTSFIMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMI
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB7 LCYIWLLVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCYIWLLVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVW
280 290 300 310 320 330
280 290 300 310 320
pF1KB7 EKLHRAFAIWSGFGMTLTGVHTCGDYMFSGHTVVLTMLNFFVTECKYLFSASMRIR
::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKLHRAFAIWSGFGMTLTGVHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNFLHTLSWVL
340 350 360 370 380 390
XP_011 NLFGIFFILAAHEHYSIDVFIAFYITTRLFLYYHTLANTRAYQQSRRARIWFPMFSFFEC
400 410 420 430 440 450
>>XP_016863330 (OMIM: 611574) PREDICTED: phosphatidylcho (242 aa)
initn: 551 init1: 460 opt: 560 Z-score: 649.2 bits: 128.0 E(85289): 2e-29
Smith-Waterman score: 560; 44.0% identity (76.2% similar) in 168 aa overlap (148-314:75-242)
120 130 140 150 160 170
pF1KB7 DCDGPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERV
:.::: .. ::. . . .:. ....:::::
XP_016 LSSGLRKGTKKYPDYIQIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERV
50 60 70 80 90 100
180 190 200 210 220 230
pF1KB7 PDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMG
: . ::::: :.: . :. :::...:. :.:: .:. :. ...::. ::.: ..:
XP_016 PPKELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIG
110 120 130 140 150 160
240 250 260 270 280 290
pF1KB7 TVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHT-CGDY
:..: ::.::.::.: :::.:.::. :. :. :..: . . :: :...:: : :::.
XP_016 TLYLYRCITMYVTTLPVPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDF
170 180 190 200 210 220
300 310 320
pF1KB7 MFSGHTVVLTMLNFFVTECKYLFSASMRIR
.::::::.::. .:. :
XP_016 LFSGHTVTLTLTYLFIKE
230 240
>>XP_011530002 (OMIM: 611574) PREDICTED: phosphatidylcho (365 aa)
initn: 551 init1: 460 opt: 560 Z-score: 646.8 bits: 128.1 E(85289): 2.7e-29
Smith-Waterman score: 560; 44.0% identity (76.2% similar) in 168 aa overlap (148-314:75-242)
120 130 140 150 160 170
pF1KB7 DCDGPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERV
:.::: .. ::. . . .:. ....:::::
XP_011 LSSGLRKGTKKYPDYIQIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERV
50 60 70 80 90 100
180 190 200 210 220 230
pF1KB7 PDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMG
: . ::::: :.: . :. :::...:. :.:: .:. :. ...::. ::.: ..:
XP_011 PPKELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIG
110 120 130 140 150 160
240 250 260 270 280 290
pF1KB7 TVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHT-CGDY
:..: ::.::.::.: :::.:.::. :. :. :..: . . :: :...:: : :::.
XP_011 TLYLYRCITMYVTTLPVPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDF
170 180 190 200 210 220
300 310 320
pF1KB7 MFSGHTVVLTMLNFFVTECKYLFSASMRIR
.::::::.::. .:. :
XP_011 LFSGHTVTLTLTYLFIKEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYIT
230 240 250 260 270 280
>>XP_011530001 (OMIM: 611574) PREDICTED: phosphatidylcho (365 aa)
initn: 551 init1: 460 opt: 560 Z-score: 646.8 bits: 128.1 E(85289): 2.7e-29
Smith-Waterman score: 560; 44.0% identity (76.2% similar) in 168 aa overlap (148-314:75-242)
120 130 140 150 160 170
pF1KB7 DCDGPITDLNSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERV
:.::: .. ::. . . .:. ....:::::
XP_011 LSSGLRKGTKKYPDYIQIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERV
50 60 70 80 90 100
180 190 200 210 220 230
pF1KB7 PDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMG
: . ::::: :.: . :. :::...:. :.:: .:. :. ...::. ::.: ..:
XP_011 PPKELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIG
110 120 130 140 150 160
240 250 260 270 280 290
pF1KB7 TVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHT-CGDY
:..: ::.::.::.: :::.:.::. :. :. :..: . . :: :...:: : :::.
XP_011 TLYLYRCITMYVTTLPVPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDF
170 180 190 200 210 220
300 310 320
pF1KB7 MFSGHTVVLTMLNFFVTECKYLFSASMRIR
.::::::.::. .:. :
XP_011 LFSGHTVTLTLTYLFIKEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYIT
230 240 250 260 270 280
326 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:09:52 2016 done: Sat Nov 5 21:09:53 2016
Total Scan time: 6.390 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]