Result of FASTA (ccds) for
pF1KB7212
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7212, 103 aa
1>>>pF1KB7212 103 - 103 aa - 103 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6775+/-0.000771; mu= 13.4149+/- 0.047
mean_var=64.1668+/-12.791, 0's: 0 Z-trim(108.8): 22 B-trim: 271 in 1/48
Lambda= 0.160110
statistics sampled from 10405 (10425) to 10405 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.32), width: 16
Scan time: 1.450
The best scores are: opt bits E(32554)
CCDS4637.1 HIST1H4L gene_id:8368|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4589.1 HIST1H4D gene_id:8360|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4583.1 HIST1H4C gene_id:8364|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS30847.1 HIST2H4A gene_id:8370|Hs108|chr1 ( 103) 663 160.9 1.3e-40
CCDS4598.1 HIST1H4F gene_id:8361|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS8665.1 HIST4H4 gene_id:121504|Hs108|chr12 ( 103) 663 160.9 1.3e-40
CCDS4572.1 HIST1H4B gene_id:8366|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS30851.1 HIST2H4B gene_id:554313|Hs108|chr1 ( 103) 663 160.9 1.3e-40
CCDS4631.1 HIST1H4K gene_id:8362|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4604.1 HIST1H4H gene_id:8365|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4571.1 HIST1H4A gene_id:8359|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4593.1 HIST1H4E gene_id:8367|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4630.1 HIST1H4J gene_id:8363|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4620.1 HIST1H4I gene_id:8294|Hs108|chr6 ( 103) 663 160.9 1.3e-40
CCDS4599.1 HIST1H4G gene_id:8369|Hs108|chr6 ( 98) 489 120.7 1.5e-28
>>CCDS4637.1 HIST1H4L gene_id:8368|Hs108|chr6 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS46 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS4589.1 HIST1H4D gene_id:8360|Hs108|chr6 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS4583.1 HIST1H4C gene_id:8364|Hs108|chr6 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS30847.1 HIST2H4A gene_id:8370|Hs108|chr1 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS30 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS4598.1 HIST1H4F gene_id:8361|Hs108|chr6 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS8665.1 HIST4H4 gene_id:121504|Hs108|chr12 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS86 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS4572.1 HIST1H4B gene_id:8366|Hs108|chr6 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS30851.1 HIST2H4B gene_id:554313|Hs108|chr1 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS30 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS4631.1 HIST1H4K gene_id:8362|Hs108|chr6 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS46 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
>>CCDS4604.1 HIST1H4H gene_id:8365|Hs108|chr6 (103 aa)
initn: 663 init1: 663 opt: 663 Z-score: 842.7 bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
10 20 30 40 50 60
70 80 90 100
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
:::::::::::::::::::::::::::::::::::::::::::
CCDS46 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
70 80 90 100
103 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:00:43 2016 done: Fri Nov 4 06:00:44 2016
Total Scan time: 1.450 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]