FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7092, 184 aa
  1>>>pF1KB7092 184 - 184 aa - 184 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4720+/-0.00078; mu= 12.2979+/- 0.047
 mean_var=64.0316+/-12.730, 0's: 0 Z-trim(107.6): 14  B-trim: 0 in 0/50
 Lambda= 0.160279
 statistics sampled from 9703 (9709) to 9703 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.298), width:  16
 Scan time:  1.900

The best scores are:                                      opt bits E(32554)
CCDS10282.1 IMP3 gene_id:55272|Hs108|chr15         ( 184) 1208 287.5 3.1e-78


>>CCDS10282.1 IMP3 gene_id:55272|Hs108|chr15              (184 aa)
 initn: 1208 init1: 1208 opt: 1208  Z-score: 1518.0  bits: 287.5 E(32554): 3.1e-78
Smith-Waterman score: 1208; 100.0% identity (100.0% similar) in 184 aa overlap (1-184:1-184)

               10        20        30        40        50        60
pF1KB7 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDF
              130       140       150       160       170       180

           
pF1KB7 DLEA
       ::::
CCDS10 DLEA
           




184 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 04:38:55 2016 done: Fri Nov  4 04:38:55 2016
 Total Scan time:  1.900 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]