Result of FASTA (omim) for
pF1KB7050
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7050, 504 aa
1>>>pF1KB7050 504 - 504 aa - 504 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1873+/-0.000304; mu= 8.1366+/- 0.019
mean_var=213.5032+/-43.454, 0's: 0 Z-trim(123.9): 32 B-trim: 98 in 1/54
Lambda= 0.087775
statistics sampled from 44603 (44635) to 44603 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.523), width: 16
Scan time: 11.250
The best scores are: opt bits E(85289)
NP_071443 (OMIM: 614803) doublesex- and mab-3-rela ( 504) 3410 444.1 4.6e-124
NP_115486 (OMIM: 614804) doublesex- and mab-3-rela ( 542) 513 77.2 1.3e-13
XP_011540239 (OMIM: 614804) PREDICTED: doublesex- ( 542) 513 77.2 1.3e-13
XP_016869864 (OMIM: 602424) PREDICTED: doublesex- ( 215) 435 67.0 6.4e-11
NP_068770 (OMIM: 602424) doublesex- and mab-3-rela ( 373) 435 67.2 9.4e-11
XP_006716795 (OMIM: 602424) PREDICTED: doublesex- ( 374) 435 67.2 9.5e-11
XP_016869705 (OMIM: 604935) PREDICTED: doublesex- ( 226) 401 62.7 1.3e-09
NP_001124337 (OMIM: 604935) doublesex- and mab-3-r ( 226) 401 62.7 1.3e-09
NP_006548 (OMIM: 604935) doublesex- and mab-3-rela ( 226) 401 62.7 1.3e-09
XP_016869703 (OMIM: 604935) PREDICTED: doublesex- ( 561) 401 63.1 2.5e-09
XP_016869704 (OMIM: 604935) PREDICTED: doublesex- ( 561) 401 63.1 2.5e-09
XP_016869702 (OMIM: 604935) PREDICTED: doublesex- ( 561) 401 63.1 2.5e-09
XP_011515989 (OMIM: 604935) PREDICTED: doublesex- ( 561) 401 63.1 2.5e-09
NP_870987 (OMIM: 604935) doublesex- and mab-3-rela ( 561) 401 63.1 2.5e-09
XP_011515992 (OMIM: 604935) PREDICTED: doublesex- ( 561) 401 63.1 2.5e-09
NP_067063 (OMIM: 614754) doublesex- and mab-3-rela ( 472) 368 58.8 4e-08
XP_011525518 (OMIM: 614806) PREDICTED: doublesex- ( 228) 291 48.8 2e-05
NP_149056 (OMIM: 614805) doublesex- and mab-3-rela ( 342) 294 49.3 2.1e-05
NP_001035373 (OMIM: 614806) doublesex- and mab-3-r ( 367) 291 49.0 2.9e-05
XP_016882618 (OMIM: 614806) PREDICTED: doublesex- ( 372) 291 49.0 2.9e-05
XP_016882617 (OMIM: 614806) PREDICTED: doublesex- ( 418) 291 49.0 3.2e-05
XP_016882615 (OMIM: 614806) PREDICTED: doublesex- ( 418) 291 49.0 3.2e-05
XP_016882614 (OMIM: 614806) PREDICTED: doublesex- ( 418) 291 49.0 3.2e-05
XP_016882616 (OMIM: 614806) PREDICTED: doublesex- ( 418) 291 49.0 3.2e-05
XP_016882613 (OMIM: 614806) PREDICTED: doublesex- ( 421) 291 49.0 3.2e-05
XP_016882612 (OMIM: 614806) PREDICTED: doublesex- ( 423) 291 49.0 3.2e-05
>>NP_071443 (OMIM: 614803) doublesex- and mab-3-related (504 aa)
initn: 3410 init1: 3410 opt: 3410 Z-score: 2348.4 bits: 444.1 E(85289): 4.6e-124
Smith-Waterman score: 3410; 100.0% identity (100.0% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 AAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRFCRWRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 AAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRFCRWRD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 CACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGGGGRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 CACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGGGGRAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 NPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNGQEELI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 NPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNGQEELI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SKSHQLYLGSSSRSNGVIGKQSIGSSISEYSNKPDSILSPHPGEQSGGEESPRSLSSSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 SKSHQLYLGSSSRSNGVIGKQSIGSSISEYSNKPDSILSPHPGEQSGGEESPRSLSSSDL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 ESGNESEWVKDLTATKASLPTVSSRPRDPLDILTKIFPNYRRSRLEGILRFCKGDVVQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 ESGNESEWVKDLTATKASLPTVSSRPRDPLDILTKIFPNYRRSRLEGILRFCKGDVVQAI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 EQVLNGKEHKPDNRNLANSEELENTAFQRASSFSLAGIGFGTLGNKSAFSPLQTTSASYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 EQVLNGKEHKPDNRNLANSEELENTAFQRASSFSLAGIGFGTLGNKSAFSPLQTTSASYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 GDSSLYGVNPRVGISPLRLAYSSAGRGLSGFMSPYLTPGLVPTLPFRPALDYAFSGMIRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GDSSLYGVNPRVGISPLRLAYSSAGRGLSGFMSPYLTPGLVPTLPFRPALDYAFSGMIRD
430 440 450 460 470 480
490 500
pF1KB7 SSYLSSKDSITCGRLYFRPNQDNP
::::::::::::::::::::::::
NP_071 SSYLSSKDSITCGRLYFRPNQDNP
490 500
>>NP_115486 (OMIM: 614804) doublesex- and mab-3-related (542 aa)
initn: 956 init1: 462 opt: 513 Z-score: 365.3 bits: 77.2 E(85289): 1.3e-13
Smith-Waterman score: 941; 40.5% identity (59.9% similar) in 516 aa overlap (28-478:8-509)
10 20 30 40 50 60
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
: :. : . . ::. :. ::::
NP_115 MELRSELPSVPGAATAAAATATGPPV----ASVASVAAAA
10 20 30
70 80 90 100 110 120
pF1KB7 AAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRFCRWRD
::::. .: .:: .: : . .. ::::::::::::::::::::::::.:::.:
NP_115 AAAASLPVSVAGGLLRGPPL---LLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKD
40 50 60 70 80 90
130 140 150 160
pF1KB7 CACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCS--GLSW-------PP---
: ::::::::::::::::::::::::::::.::: :: : . ::. ::
NP_115 CLCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGIIPPRPA
100 110 120 130 140 150
170 180 190 200 210 220
pF1KB7 ----GG--RASGGGGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQ
:. :.::: : : .::: ::::. . . :.. . ... . :
NP_115 YEVFGSVCAADGGGPGAGAPAGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPP
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 EQKESKCESCQNGQEELISKSHQLYLGSSSRSNGVIGKQSIGSSISEYSNKPDSILSPHP
. : .. ..: ..: .. ::.:. :: :.. :: ... :.. .
NP_115 VKPLSP-DGADSGPG---TSSPEVRPGSGSE-NGD-GESFSGSPLARASKEAGGSCPGSA
220 230 240 250 260
290 300 310 320 330 340
pF1KB7 GEQSGGEE-SPRSLSSSDLESGNESEWVKDLTATKASLPTVSS-RPRDPLDILTKIFPNY
: .:::: :: : : :::.:.. . .: .: :. : : ::::::..::..
NP_115 GPGGGGEEDSPGSASPLGSESGSEADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGH
270 280 290 300 310 320
350 360 370 380 390
pF1KB7 RRSRLEGILRFCKGDVVQAIEQVLN----------GKEHKPDNRNLANSEELENTAFQRA
::. :: .:. : :::::::::::: : ::. .. . ... .:.
NP_115 RRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAAGLGPAAPPDKAAVGAAAAADDAWPSRV
330 340 350 360 370 380
400 410
pF1KB7 SSFS----------------------------LAGI----GFGTLGNKSAFSPLQTTSAS
.. . ::: ..:.:...::::::: ...
NP_115 DAAAAAAAAAGGPGLPAPLQAGPAAPPHHRPLLAGAMAPGALGSLSSRSAFSPLQPNASH
390 400 410 420 430 440
420 430 440 450 460 470
pF1KB7 YGGDSSLYGVNPRVGISPLRLAYSSAG---RGLSGFMSPYLTPGLVPTLPFRPALDYAFS
.:.:.. : .. .:.::::::::.:. :::. ::.:: : :::::: ::: .:::::
NP_115 FGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGLA-FMAPYSTAGLVPTLGFRPPMDYAFS
450 460 470 480 490 500
480 490 500
pF1KB7 GMIRDSSYLSSKDSITCGRLYFRPNQDNP
..
NP_115 DLMRDRSAAAAAAVHKEPTYGGGLYGPMVNGAPEKQ
510 520 530 540
>>XP_011540239 (OMIM: 614804) PREDICTED: doublesex- and (542 aa)
initn: 956 init1: 462 opt: 513 Z-score: 365.3 bits: 77.2 E(85289): 1.3e-13
Smith-Waterman score: 941; 40.5% identity (59.9% similar) in 516 aa overlap (28-478:8-509)
10 20 30 40 50 60
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
: :. : . . ::. :. ::::
XP_011 MELRSELPSVPGAATAAAATATGPPV----ASVASVAAAA
10 20 30
70 80 90 100 110 120
pF1KB7 AAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRFCRWRD
::::. .: .:: .: : . .. ::::::::::::::::::::::::.:::.:
XP_011 AAAASLPVSVAGGLLRGPPL---LLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKD
40 50 60 70 80 90
130 140 150 160
pF1KB7 CACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCS--GLSW-------PP---
: ::::::::::::::::::::::::::::.::: :: : . ::. ::
XP_011 CLCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGIIPPRPA
100 110 120 130 140 150
170 180 190 200 210 220
pF1KB7 ----GG--RASGGGGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQ
:. :.::: : : .::: ::::. . . :.. . ... . :
XP_011 YEVFGSVCAADGGGPGAGAPAGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPP
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 EQKESKCESCQNGQEELISKSHQLYLGSSSRSNGVIGKQSIGSSISEYSNKPDSILSPHP
. : .. ..: ..: .. ::.:. :: :.. :: ... :.. .
XP_011 VKPLSP-DGADSGPG---TSSPEVRPGSGSE-NGD-GESFSGSPLARASKEAGGSCPGSA
220 230 240 250 260
290 300 310 320 330 340
pF1KB7 GEQSGGEE-SPRSLSSSDLESGNESEWVKDLTATKASLPTVSS-RPRDPLDILTKIFPNY
: .:::: :: : : :::.:.. . .: .: :. : : ::::::..::..
XP_011 GPGGGGEEDSPGSASPLGSESGSEADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGH
270 280 290 300 310 320
350 360 370 380 390
pF1KB7 RRSRLEGILRFCKGDVVQAIEQVLN----------GKEHKPDNRNLANSEELENTAFQRA
::. :: .:. : :::::::::::: : ::. .. . ... .:.
XP_011 RRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAAGLGPAAPPDKAAVGAAAAADDAWPSRV
330 340 350 360 370 380
400 410
pF1KB7 SSFS----------------------------LAGI----GFGTLGNKSAFSPLQTTSAS
.. . ::: ..:.:...::::::: ...
XP_011 DAAAAAAAAAGGPGLPAPLQAGPAAPPHHRPLLAGAMAPGALGSLSSRSAFSPLQPNASH
390 400 410 420 430 440
420 430 440 450 460 470
pF1KB7 YGGDSSLYGVNPRVGISPLRLAYSSAG---RGLSGFMSPYLTPGLVPTLPFRPALDYAFS
.:.:.. : .. .:.::::::::.:. :::. ::.:: : :::::: ::: .:::::
XP_011 FGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGLA-FMAPYSTAGLVPTLGFRPPMDYAFS
450 460 470 480 490 500
480 490 500
pF1KB7 GMIRDSSYLSSKDSITCGRLYFRPNQDNP
..
XP_011 DLMRDRSAAAAAAVHKEPTYGGGLYGPMVNGAPEKQ
510 520 530 540
>>XP_016869864 (OMIM: 602424) PREDICTED: doublesex- and (215 aa)
initn: 442 init1: 407 opt: 435 Z-score: 317.1 bits: 67.0 E(85289): 6.4e-11
Smith-Waterman score: 435; 57.9% identity (71.4% similar) in 126 aa overlap (28-150:10-129)
10 20 30 40 50 60
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
: :: : : . ::: : . : .:..:
XP_016 MPNDEAFSKPSTPSEA---PHAPGVPPQG-RAGG-FGKASGA
10 20 30
70 80 90 100 110
pF1KB7 AAAAAAATSGSGGCPPAPGLESGVGAVGCGY---PRTPKCARCRNHGVVSALKGHKRFCR
..::...: .:: . : ::.. .: : :: :::::::::: .: ::::::::
XP_016 LVGAASGSS-AGGSSRGGGSGSGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCM
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB7 WRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGGGG
:::: : ::.:::::::::::::::::::::::
XP_016 WRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 RAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNGQE
XP_016 CLMTECSGTSQPPPASVPTTAASDEEHGEPPCNELPVQDAFLLPASLLPGPERAPVLHF
160 170 180 190 200 210
>>NP_068770 (OMIM: 602424) doublesex- and mab-3-related (373 aa)
initn: 442 init1: 407 opt: 435 Z-score: 314.0 bits: 67.2 E(85289): 9.4e-11
Smith-Waterman score: 435; 57.9% identity (71.4% similar) in 126 aa overlap (28-150:10-129)
10 20 30 40 50 60
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
: :: : : . ::: : . : .:..:
NP_068 MPNDEAFSKPSTPSEA---PHAPGVPPQG-RAGG-FGKASGA
10 20 30
70 80 90 100 110
pF1KB7 AAAAAAATSGSGGCPPAPGLESGVGAVGCGY---PRTPKCARCRNHGVVSALKGHKRFCR
..::...: .:: . : ::.. .: : :: :::::::::: .: ::::::::
NP_068 LVGAASGSS-AGGSSRGGGSGSGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCM
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB7 WRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGGGG
:::: : ::.:::::::::::::::::::::::
NP_068 WRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 RAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNGQE
NP_068 CLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQP
160 170 180 190 200 210
>>XP_006716795 (OMIM: 602424) PREDICTED: doublesex- and (374 aa)
initn: 442 init1: 407 opt: 435 Z-score: 314.0 bits: 67.2 E(85289): 9.5e-11
Smith-Waterman score: 435; 57.9% identity (71.4% similar) in 126 aa overlap (28-150:10-129)
10 20 30 40 50 60
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
: :: : : . ::: : . : .:..:
XP_006 MPNDEAFSKPSTPSEA---PHAPGVPPQG-RAGG-FGKASGA
10 20 30
70 80 90 100 110
pF1KB7 AAAAAAATSGSGGCPPAPGLESGVGAVGCGY---PRTPKCARCRNHGVVSALKGHKRFCR
..::...: .:: . : ::.. .: : :: :::::::::: .: ::::::::
XP_006 LVGAASGSS-AGGSSRGGGSGSGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCM
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB7 WRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGGGG
:::: : ::.:::::::::::::::::::::::
XP_006 WRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 RAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNGQE
XP_006 CLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQP
160 170 180 190 200 210
>>XP_016869705 (OMIM: 604935) PREDICTED: doublesex- and (226 aa)
initn: 431 init1: 375 opt: 401 Z-score: 293.5 bits: 62.7 E(85289): 1.3e-09
Smith-Waterman score: 414; 54.2% identity (62.6% similar) in 131 aa overlap (26-156:68-180)
10 20 30 40 50
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFL
:. : :. : : : :::
XP_016 SPPPADGDCEDDEDDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQP----RPP----
40 50 60 70 80
60 70 80 90 100 110
pF1KB7 RAAAAAAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRF
: :. :.:. : :: : :: ::::::::::::::: :::::::
XP_016 ---LAPQASPAGTGPRERCTPAGG-----GAEPRKLSRTPKCARCRNHGVVSCLKGHKRF
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB7 CRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGG
:::::: ::.: :..::::::::::::::::: :.. .::
XP_016 CRWRDCQCANCLLVVERQRVMAAQVALRRQQATEDK--KGLSGKQNNFERKAVYQRQVRA
150 160 170 180 190
180 190 200 210 220 230
pF1KB7 GGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNG
XP_016 PSLLAKSILEVLLGLFYSYYVYIMNHL
200 210 220
>>NP_001124337 (OMIM: 604935) doublesex- and mab-3-relat (226 aa)
initn: 431 init1: 375 opt: 401 Z-score: 293.5 bits: 62.7 E(85289): 1.3e-09
Smith-Waterman score: 414; 54.2% identity (62.6% similar) in 131 aa overlap (26-156:68-180)
10 20 30 40 50
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFL
:. : :. : : : :::
NP_001 SPPPADGDCEDDEDDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQP----RPP----
40 50 60 70 80
60 70 80 90 100 110
pF1KB7 RAAAAAAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRF
: :. :.:. : :: : :: ::::::::::::::: :::::::
NP_001 ---LAPQASPAGTGPRERCTPAGG-----GAEPRKLSRTPKCARCRNHGVVSCLKGHKRF
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB7 CRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGG
:::::: ::.: :..::::::::::::::::: :.. .::
NP_001 CRWRDCQCANCLLVVERQRVMAAQVALRRQQATEDK--KGLSGKQNNFERKAVYQRQVRA
150 160 170 180 190
180 190 200 210 220 230
pF1KB7 GGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNG
NP_001 PSLLAKSILEVLLGLFYSYYVYIMNHL
200 210 220
>>NP_006548 (OMIM: 604935) doublesex- and mab-3-related (226 aa)
initn: 431 init1: 375 opt: 401 Z-score: 293.5 bits: 62.7 E(85289): 1.3e-09
Smith-Waterman score: 414; 54.2% identity (62.6% similar) in 131 aa overlap (26-156:68-180)
10 20 30 40 50
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFL
:. : :. : : : :::
NP_006 SPPPADGDCEDDEDDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQP----RPP----
40 50 60 70 80
60 70 80 90 100 110
pF1KB7 RAAAAAAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRF
: :. :.:. : :: : :: ::::::::::::::: :::::::
NP_006 ---LAPQASPAGTGPRERCTPAGG-----GAEPRKLSRTPKCARCRNHGVVSCLKGHKRF
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB7 CRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGG
:::::: ::.: :..::::::::::::::::: :.. .::
NP_006 CRWRDCQCANCLLVVERQRVMAAQVALRRQQATEDK--KGLSGKQNNFERKAVYQRQVRA
150 160 170 180 190
180 190 200 210 220 230
pF1KB7 GGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNG
NP_006 PSLLAKSILEVLLGLFYSYYVYIMNHL
200 210 220
>>XP_016869703 (OMIM: 604935) PREDICTED: doublesex- and (561 aa)
initn: 436 init1: 380 opt: 401 Z-score: 288.4 bits: 63.1 E(85289): 2.5e-09
Smith-Waterman score: 414; 54.2% identity (62.6% similar) in 131 aa overlap (26-156:68-180)
10 20 30 40 50
pF1KB7 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFL
:. : :. : : : :::
XP_016 SPPPADGDCEDDEDDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQP----RPP----
40 50 60 70 80
60 70 80 90 100 110
pF1KB7 RAAAAAAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRF
: :. :.:. : :: : :: ::::::::::::::: :::::::
XP_016 ---LAPQASPAGTGPRERCTPAGG-----GAEPRKLSRTPKCARCRNHGVVSCLKGHKRF
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB7 CRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGG
:::::: ::.: :..::::::::::::::::: :.. .::
XP_016 CRWRDCQCANCLLVVERQRVMAAQVALRRQQATEDK--KGLSGKQNNFERKAVYQRQVRA
150 160 170 180 190
180 190 200 210 220 230
pF1KB7 GGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNG
XP_016 PSLLAKSILEGYRPIPAETYVGGTFPLPPPVSDRMRKRRAFADKELENIMLEREYKEREM
200 210 220 230 240 250
504 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:14:50 2016 done: Fri Nov 4 04:14:52 2016
Total Scan time: 11.250 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]