Result of FASTA (ccds) for
pF1KB7013
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7013, 1086 aa
1>>>pF1KB7013 1086 - 1086 aa - 1086 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7283+/-0.0012; mu= 20.0446+/- 0.072
mean_var=76.1415+/-15.387, 0's: 0 Z-trim(101.7): 45 B-trim: 0 in 0/48
Lambda= 0.146982
statistics sampled from 6637 (6645) to 6637 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.539), E-opt: 0.2 (0.204), width: 16
Scan time: 4.830
The best scores are: opt bits E(32554)
CCDS3949.1 NNT gene_id:23530|Hs108|chr5 (1086) 6970 1488.5 0
CCDS82994.1 NNT gene_id:23530|Hs108|chr5 ( 955) 6104 1304.9 0
>>CCDS3949.1 NNT gene_id:23530|Hs108|chr5 (1086 aa)
initn: 6970 init1: 6970 opt: 6970 Z-score: 7981.2 bits: 1488.5 E(32554): 0
Smith-Waterman score: 6970; 100.0% identity (100.0% similar) in 1086 aa overlap (1-1086:1-1086)
10 20 30 40 50 60
pF1KB7 MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB7 GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB7 PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB7 ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB7 EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB7 NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB7 YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB7 KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB7 GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB7 NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV
1030 1040 1050 1060 1070 1080
pF1KB7 RESYQK
::::::
CCDS39 RESYQK
>>CCDS82994.1 NNT gene_id:23530|Hs108|chr5 (955 aa)
initn: 6104 init1: 6104 opt: 6104 Z-score: 6989.6 bits: 1304.9 E(32554): 0
Smith-Waterman score: 6104; 100.0% identity (100.0% similar) in 955 aa overlap (132-1086:1-955)
110 120 130 140 150 160
pF1KB7 SDDHYRVAGAQIQGAKEVLASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNP
::::::::::::::::::::::::::::::
CCDS82 MVNPTLGVHEADLLKTSGTLISFIYPAQNP
10 20 30
170 180 190 200 210 220
pF1KB7 ELLNKLSQRKTTVLAMDQVPRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ELLNKLSQRKTTVLAMDQVPRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITA
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB7 AGKVPPAKILIVGGGVAGLASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 AGKVPPAKILIVGGGVAGLASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKES
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB7 GEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGS
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB7 VVVDLAAEAGGNFETTKPGELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VVVDLAAEAGGNFETTKPGELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISP
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB7 DKDNFYFDVKDDFDFGTMGHVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DKDNFYFDVKDDFDFGTMGHVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAE
280 290 300 310 320 330
470 480 490 500 510 520
pF1KB7 KAATITPFRKTMSTASAYTAGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KAATITPFRKTMSTASAYTAGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTP
340 350 360 370 380 390
530 540 550 560 570 580
pF1KB7 ALHSPLMSVTNAISGLTAVGGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ALHSPLMSVTNAISGLTAVGGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRM
400 410 420 430 440 450
590 600 610 620 630 640
pF1KB7 LDMFKRPTDPPEYNYLYLLPAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LDMFKRPTDPPEYNYLYLLPAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQ
460 470 480 490 500 510
650 660 670 680 690 700
pF1KB7 GTARLGNALGMIGVAGGLAATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GTARLGNALGMIGVAGGLAATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQ
520 530 540 550 560 570
710 720 730 740 750 760
pF1KB7 LVAAFHSLVGLAAVLTCIAEYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LVAAFHSLVGLAAVLTCIAEYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYG
580 590 600 610 620 630
770 780 790 800 810 820
pF1KB7 KLQGLLKSAPLLLPGRHLLNAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KLQGLLKSAPLLLPGRHLLNAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVT
640 650 660 670 680 690
830 840 850 860 870 880
pF1KB7 LTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMN
700 710 720 730 740 750
890 900 910 920 930 940
pF1KB7 RSLANVILGGYGTTSTAGGKPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RSLANVILGGYGTTSTAGGKPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQ
760 770 780 790 800 810
950 960 970 980 990 1000
pF1KB7 YPIADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 YPIADLVKMLTEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTD
820 830 840 850 860 870
1010 1020 1030 1040 1050 1060
pF1KB7 LVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPN
880 890 900 910 920 930
1070 1080
pF1KB7 TAMLLGDAKKTCDALQAKVRESYQK
:::::::::::::::::::::::::
CCDS82 TAMLLGDAKKTCDALQAKVRESYQK
940 950
1086 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:11:58 2016 done: Thu Nov 3 18:11:59 2016
Total Scan time: 4.830 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]