Result of FASTA (omim) for
pF1KB6956
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6956, 238 aa
1>>>pF1KB6956 238 - 238 aa - 238 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4921+/-0.000419; mu= 2.1958+/- 0.027
mean_var=310.5542+/-63.994, 0's: 0 Z-trim(122.1): 269 B-trim: 2311 in 2/59
Lambda= 0.072779
statistics sampled from 39411 (39757) to 39411 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.466), width: 16
Scan time: 6.710
The best scores are: opt bits E(85289)
NP_001026854 (OMIM: 600572) serine/arginine-rich s ( 238) 1623 183.0 3.9e-46
XP_005264541 (OMIM: 600572) PREDICTED: serine/argi ( 235) 1584 178.9 6.6e-45
NP_001182375 (OMIM: 600572) serine/arginine-rich s ( 226) 1471 167.0 2.4e-41
XP_005264542 (OMIM: 600572) PREDICTED: serine/argi ( 223) 1432 162.9 4.1e-40
XP_011531334 (OMIM: 600572) PREDICTED: serine/argi ( 121) 710 86.8 1.8e-17
NP_003008 (OMIM: 603364) serine/arginine-rich spli ( 164) 557 70.9 1.5e-12
XP_016880431 (OMIM: 600813) PREDICTED: serine/argi ( 221) 436 58.4 1.2e-08
NP_001182356 (OMIM: 600813) serine/arginine-rich s ( 221) 436 58.4 1.2e-08
NP_003007 (OMIM: 600813) serine/arginine-rich spli ( 221) 436 58.4 1.2e-08
NP_001177934 (OMIM: 605221) serine/arginine-rich s ( 261) 395 54.1 2.7e-07
NP_473357 (OMIM: 605221) serine/arginine-rich spli ( 262) 389 53.5 4.1e-07
NP_115285 (OMIM: 603269) serine/arginine-rich spli ( 282) 376 52.2 1.1e-06
XP_016872631 (OMIM: 603269) PREDICTED: serine/argi ( 282) 376 52.2 1.1e-06
NP_001287866 (OMIM: 605221) serine/arginine-rich s ( 217) 348 49.1 7.3e-06
NP_001177936 (OMIM: 605221) serine/arginine-rich s ( 182) 314 45.4 7.8e-05
NP_001287865 (OMIM: 605221) serine/arginine-rich s ( 172) 310 45.0 0.0001
NP_006616 (OMIM: 605221) serine/arginine-rich spli ( 183) 308 44.8 0.00012
NP_001177935 (OMIM: 605221) serine/arginine-rich s ( 173) 304 44.4 0.00016
NP_008855 (OMIM: 600812) serine/arginine-rich spli ( 248) 299 44.0 0.00028
XP_016858320 (OMIM: 602010) PREDICTED: serine/argi ( 293) 295 43.7 0.00042
XP_016858319 (OMIM: 602010) PREDICTED: serine/argi ( 293) 295 43.7 0.00042
XP_016858323 (OMIM: 602010) PREDICTED: serine/argi ( 293) 295 43.7 0.00042
XP_016858321 (OMIM: 602010) PREDICTED: serine/argi ( 293) 295 43.7 0.00042
XP_016858322 (OMIM: 602010) PREDICTED: serine/argi ( 293) 295 43.7 0.00042
XP_016858315 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858313 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858314 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858312 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858318 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858317 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858316 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858311 (OMIM: 602010) PREDICTED: serine/argi ( 294) 295 43.7 0.00042
XP_016858302 (OMIM: 602010) PREDICTED: serine/argi ( 483) 295 44.0 0.00057
NP_001177916 (OMIM: 602010) serine/arginine-rich s ( 483) 295 44.0 0.00057
XP_016858301 (OMIM: 602010) PREDICTED: serine/argi ( 484) 295 44.0 0.00057
XP_011540729 (OMIM: 602010) PREDICTED: serine/argi ( 484) 295 44.0 0.00057
NP_004759 (OMIM: 602010) serine/arginine-rich spli ( 484) 295 44.0 0.00057
NP_005617 (OMIM: 601940) serine/arginine-rich spli ( 494) 289 43.4 0.00089
NP_001177938 (OMIM: 605221) serine/arginine-rich s ( 165) 275 41.3 0.0012
XP_016864544 (OMIM: 609268) PREDICTED: splicing re ( 503) 279 42.3 0.0019
NP_006266 (OMIM: 601944) serine/arginine-rich spli ( 344) 274 41.6 0.0021
XP_016858310 (OMIM: 602010) PREDICTED: serine/argi ( 300) 261 40.1 0.005
XP_016858309 (OMIM: 602010) PREDICTED: serine/argi ( 300) 261 40.1 0.005
XP_016858307 (OMIM: 602010) PREDICTED: serine/argi ( 301) 261 40.1 0.005
XP_016858306 (OMIM: 602010) PREDICTED: serine/argi ( 301) 261 40.1 0.005
XP_016858308 (OMIM: 602010) PREDICTED: serine/argi ( 301) 261 40.1 0.005
XP_016858305 (OMIM: 602010) PREDICTED: serine/argi ( 301) 261 40.1 0.005
XP_011540730 (OMIM: 602010) PREDICTED: serine/argi ( 431) 261 40.3 0.0063
XP_016858304 (OMIM: 602010) PREDICTED: serine/argi ( 431) 261 40.3 0.0063
XP_011540733 (OMIM: 602010) PREDICTED: serine/argi ( 431) 261 40.3 0.0063
>>NP_001026854 (OMIM: 600572) serine/arginine-rich splic (238 aa)
initn: 1623 init1: 1623 opt: 1623 Z-score: 949.3 bits: 183.0 E(85289): 3.9e-46
Smith-Waterman score: 1623; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KB6 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 SGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASPERMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASPERMD
190 200 210 220 230
>>XP_005264541 (OMIM: 600572) PREDICTED: serine/arginine (235 aa)
initn: 1668 init1: 1293 opt: 1584 Z-score: 927.2 bits: 178.9 E(85289): 6.6e-45
Smith-Waterman score: 1584; 98.7% identity (98.7% similar) in 238 aa overlap (1-238:1-235)
10 20 30 40 50 60
pF1KB6 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 SGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASPERMD
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGSIKGSR---SPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASPERMD
190 200 210 220 230
>>NP_001182375 (OMIM: 600572) serine/arginine-rich splic (226 aa)
initn: 1894 init1: 1456 opt: 1471 Z-score: 863.3 bits: 167.0 E(85289): 2.4e-41
Smith-Waterman score: 1511; 95.0% identity (95.0% similar) in 238 aa overlap (1-238:1-226)
10 20 30 40 50 60
pF1KB6 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 SGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASPERMD
::::::::::::::::::::::::::::::: :::::::::::::::
NP_001 SGSIKGSRYFQSPSRSRSRSRSISRPRSSRS------------PSGSPRRSASPERMD
190 200 210 220
>>XP_005264542 (OMIM: 600572) PREDICTED: serine/arginine (223 aa)
initn: 1487 init1: 1293 opt: 1432 Z-score: 841.2 bits: 162.9 E(85289): 4.1e-40
Smith-Waterman score: 1472; 93.7% identity (93.7% similar) in 238 aa overlap (1-238:1-223)
10 20 30 40 50 60
pF1KB6 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSR
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 SGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASPERMD
:::::::: :::::::::::::::::::: :::::::::::::::
XP_005 SGSIKGSR---SPSRSRSRSRSISRPRSSRS------------PSGSPRRSASPERMD
190 200 210 220
>>XP_011531334 (OMIM: 600572) PREDICTED: serine/arginine (121 aa)
initn: 705 init1: 705 opt: 710 Z-score: 434.5 bits: 86.8 E(85289): 1.8e-17
Smith-Waterman score: 710; 94.1% identity (96.6% similar) in 119 aa overlap (120-238:3-121)
90 100 110 120 130 140
pF1KB6 RFDRPPARRPFDPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSR
.: : . .:::::::::::::::::::::
XP_011 MGQRGSTCKLARSRSRSHSRSRGRRYSRSRSR
10 20 30
150 160 170 180 190 200
pF1KB6 SRGRRSRSASPRRSRSISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRGRRSRSASPRRSRSISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSS
40 50 60 70 80 90
210 220 230
pF1KB6 RSKSRSPSPKRSRSPSGSPRRSASPERMD
:::::::::::::::::::::::::::::
XP_011 RSKSRSPSPKRSRSPSGSPRRSASPERMD
100 110 120
>>NP_003008 (OMIM: 603364) serine/arginine-rich splicing (164 aa)
initn: 769 init1: 427 opt: 557 Z-score: 346.2 bits: 70.9 E(85289): 1.5e-12
Smith-Waterman score: 557; 60.0% identity (72.7% similar) in 165 aa overlap (10-170:9-163)
10 20 30 40 50 60
pF1KB6 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA
. ::::::::....: ::::::.::::::.::.::::::::::::::::::
NP_003 MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDA
10 20 30 40 50
70 80 90 100 110
pF1KB6 EDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPP---ARRPFDPNDRCYECGEKGHYAY
:::: :::...:: :::::::.: .::: :: .::: : : .
NP_003 ADAVRELDGRTLCGCRVRVELSNG-EKRSRNRGPPPSWGRRPRDDYRR---------RSP
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 DCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRR-SRSASPRRSRSISLRRSRSASL
.: : :::: :::::.: :: :: :: :: :... ::: : :::: : .:
NP_003 PPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRSRSNERK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 RRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASPER
>>XP_016880431 (OMIM: 600813) PREDICTED: serine/arginine (221 aa)
initn: 442 init1: 243 opt: 436 Z-score: 276.1 bits: 58.4 E(85289): 1.2e-08
Smith-Waterman score: 459; 44.1% identity (59.7% similar) in 238 aa overlap (4-227:3-218)
10 20 30 40 50
pF1KB6 MSRYGR----YGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAF
::: : :.. : :: .. :.:.: :: . :.: :. ::::
XP_016 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF
10 20 30 40 50
60 70 80 90 100
pF1KB6 VEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPP----ARRPFDPNDRCY
:.:.: ::::::. ..:: :. : ..::... :. ::: .:: : : :
XP_016 VRFHDKRDAEDAMDAMDGAVLDGRELRVQMA-------RYGRPPDSHHSRR--GPPPRRY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 ECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGR-RYSRSRSRSRGRRSRSASPRRSRSI
: : :. . :::::::::::.::::.: :::::.:::: :::: : .:::
XP_016 --G-GGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSR-TRSRSRSTSKSRSA
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 SLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSG
.:.:.:. :::: .: ::::::: : :.:.::: :: .: :
XP_016 RRSKSKSSSVSRSRS---------RSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEEG
170 180 190 200 210
230
pF1KB6 SPRRSASPERMD
.
XP_016 AVSS
220
>>NP_001182356 (OMIM: 600813) serine/arginine-rich splic (221 aa)
initn: 442 init1: 243 opt: 436 Z-score: 276.1 bits: 58.4 E(85289): 1.2e-08
Smith-Waterman score: 459; 44.1% identity (59.7% similar) in 238 aa overlap (4-227:3-218)
10 20 30 40 50
pF1KB6 MSRYGR----YGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAF
::: : :.. : :: .. :.:.: :: . :.: :. ::::
NP_001 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF
10 20 30 40 50
60 70 80 90 100
pF1KB6 VEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPP----ARRPFDPNDRCY
:.:.: ::::::. ..:: :. : ..::... :. ::: .:: : : :
NP_001 VRFHDKRDAEDAMDAMDGAVLDGRELRVQMA-------RYGRPPDSHHSRR--GPPPRRY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 ECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGR-RYSRSRSRSRGRRSRSASPRRSRSI
: : :. . :::::::::::.::::.: :::::.:::: :::: : .:::
NP_001 --G-GGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSR-TRSRSRSTSKSRSA
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 SLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSG
.:.:.:. :::: .: ::::::: : :.:.::: :: .: :
NP_001 RRSKSKSSSVSRSRS---------RSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEEG
170 180 190 200 210
230
pF1KB6 SPRRSASPERMD
.
NP_001 AVSS
220
>>NP_003007 (OMIM: 600813) serine/arginine-rich splicing (221 aa)
initn: 442 init1: 243 opt: 436 Z-score: 276.1 bits: 58.4 E(85289): 1.2e-08
Smith-Waterman score: 459; 44.1% identity (59.7% similar) in 238 aa overlap (4-227:3-218)
10 20 30 40 50
pF1KB6 MSRYGR----YGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARN-----PPGFAF
::: : :.. : :: .. :.:.: :: . :.: :. ::::
NP_003 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF
10 20 30 40 50
60 70 80 90 100
pF1KB6 VEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPP----ARRPFDPNDRCY
:.:.: ::::::. ..:: :. : ..::... :. ::: .:: : : :
NP_003 VRFHDKRDAEDAMDAMDGAVLDGRELRVQMA-------RYGRPPDSHHSRR--GPPPRRY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 ECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGR-RYSRSRSRSRGRRSRSASPRRSRSI
: : :. . :::::::::::.::::.: :::::.:::: :::: : .:::
NP_003 --G-GGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSR-TRSRSRSTSKSRSA
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 SLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSG
.:.:.:. :::: .: ::::::: : :.:.::: :: .: :
NP_003 RRSKSKSSSVSRSRS---------RSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEEG
170 180 190 200 210
230
pF1KB6 SPRRSASPERMD
.
NP_003 AVSS
220
>>NP_001177934 (OMIM: 605221) serine/arginine-rich splic (261 aa)
initn: 453 init1: 149 opt: 395 Z-score: 252.0 bits: 54.1 E(85289): 2.7e-07
Smith-Waterman score: 404; 37.2% identity (60.2% similar) in 266 aa overlap (1-231:1-259)
10 20 30 40 50
pF1KB6 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWI-----ARNPPGFAFVEFE
:::: : .:...: :.. . . .:.: :. :::. :.. .: : :::.:.::
NP_001 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE
10 20 30 40 50
60 70 80 90 100
pF1KB6 DPRDAEDAVRGLDGKVICGSRVRVELSTG---MPRR------------SRFDRPPARRPF
: ::::::...:: : ::: ....... : : . ::.: :
NP_001 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNVYSSSRYDDYDRYR--
60 70 80 90 100 110
110 120 130 140
pF1KB6 DPNDRCYECGEKGHYAYD-CHRYSRRRRSRS-----RSRSHS-----RSRGRRYSRSRSR
.: :: .. ..: .: : :.: :::::: . :.: .:::.:
NP_001 RSRSRSYERRRSRSRSFDYNYRRSYSPRNRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSN
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB6 SRGRRSRSASPRRSRSISLRRSRSASLRRSRSGSIKGSR-YFQSPSRSRSRSRSISRPRS
::.: :.: .. .. : :::::: ..:. : :. ...: :: ...::. :::
NP_001 SRSR-SKSQPKKEMKAKS--RSRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRS
180 190 200 210 220 230
210 220 230
pF1KB6 ---SRSKSRSPSPKRSRSPSGSPRRSASPERMD
:::.::: : .:::: . ::. :
NP_001 KSQSRSQSRSRSKSRSRSWT-SPKSSGH
240 250 260
238 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:31:27 2016 done: Sat Nov 5 14:31:28 2016
Total Scan time: 6.710 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]