Result of FASTA (omim) for
pF1KB6950
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6950, 234 aa
1>>>pF1KB6950 234 - 234 aa - 234 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1050+/-0.000394; mu= 15.1415+/- 0.024
mean_var=59.2622+/-11.670, 0's: 0 Z-trim(111.4): 69 B-trim: 0 in 0/54
Lambda= 0.166604
statistics sampled from 19914 (19981) to 19914 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.234), width: 16
Scan time: 5.750
The best scores are: opt bits E(85289)
NP_002778 (OMIM: 176842) proteasome subunit alpha ( 234) 1523 374.4 9.2e-104
NP_002783 (OMIM: 606607) proteasome subunit alpha ( 248) 548 140.1 3.4e-33
NP_001096137 (OMIM: 176846) proteasome subunit alp ( 261) 496 127.6 2.1e-29
NP_002780 (OMIM: 176846) proteasome subunit alpha ( 261) 496 127.6 2.1e-29
NP_001317605 (OMIM: 176846) proteasome subunit alp ( 261) 496 127.6 2.1e-29
NP_002782 (OMIM: 602855,608446) proteasome subunit ( 246) 465 120.1 3.4e-27
NP_002781 (OMIM: 176844) proteasome subunit alpha ( 241) 450 116.5 4.1e-26
NP_001317602 (OMIM: 176846) proteasome subunit alp ( 174) 447 115.7 5.1e-26
NP_002777 (OMIM: 602854) proteasome subunit alpha ( 263) 411 107.1 2.9e-23
NP_683877 (OMIM: 602854) proteasome subunit alpha ( 269) 410 106.9 3.5e-23
NP_001269163 (OMIM: 602855,608446) proteasome subu ( 227) 403 105.2 9.8e-23
NP_002779 (OMIM: 176843) proteasome subunit alpha ( 255) 386 101.1 1.8e-21
NP_687033 (OMIM: 176843) proteasome subunit alpha ( 248) 381 99.9 4.1e-21
NP_001317604 (OMIM: 176846) proteasome subunit alp ( 230) 372 97.7 1.7e-20
NP_001096138 (OMIM: 176846) proteasome subunit alp ( 190) 360 94.8 1.1e-19
NP_001269162 (OMIM: 602855,608446) proteasome subu ( 167) 301 80.6 1.8e-15
NP_001269161 (OMIM: 602855,608446) proteasome subu ( 167) 301 80.6 1.8e-15
XP_016876957 (OMIM: 602855,608446) PREDICTED: prot ( 167) 301 80.6 1.8e-15
NP_001186702 (OMIM: 176844) proteasome subunit alp ( 183) 298 79.9 3.2e-15
NP_001186701 (OMIM: 176844) proteasome subunit alp ( 183) 298 79.9 3.2e-15
NP_001186703 (OMIM: 176844) proteasome subunit alp ( 183) 298 79.9 3.2e-15
NP_001137409 (OMIM: 602854) proteasome subunit alp ( 130) 215 59.9 2.4e-09
NP_002788 (OMIM: 600306) proteasome subunit beta t ( 263) 175 50.4 3.5e-06
NP_004150 (OMIM: 177046,256040) proteasome subunit ( 272) 167 48.5 1.4e-05
NP_683720 (OMIM: 177046,256040) proteasome subunit ( 276) 167 48.5 1.4e-05
NP_001124197 (OMIM: 600306) proteasome subunit bet ( 160) 146 43.3 0.00029
NP_002792 (OMIM: 176847) proteasome subunit beta t ( 273) 146 43.5 0.00045
NP_001093250 (OMIM: 611137) proteasome subunit bet ( 300) 133 40.4 0.0043
>>NP_002778 (OMIM: 176842) proteasome subunit alpha type (234 aa)
initn: 1523 init1: 1523 opt: 1523 Z-score: 1983.9 bits: 374.4 E(85289): 9.2e-104
Smith-Waterman score: 1523; 100.0% identity (100.0% similar) in 234 aa overlap (1-234:1-234)
10 20 30 40 50 60
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 YTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 YTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNE
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 DLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAAIA
190 200 210 220 230
>>NP_002783 (OMIM: 606607) proteasome subunit alpha type (248 aa)
initn: 491 init1: 352 opt: 548 Z-score: 716.9 bits: 140.1 E(85289): 3.4e-33
Smith-Waterman score: 548; 38.8% identity (71.6% similar) in 232 aa overlap (6-233:3-232)
10 20 30 40 50 60
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
:. ..:.:::.:.: :.::: :: :. .::... . :::..:::. . : :::
NP_002 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDER
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE
.:.:. . .. ....:. : :....::: :.. :. ..:. . ... .::. :.
NP_002 TVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQR
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 YTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY-
::::.: ::::.: :: :.. .: : :.:.::::.: ::::.:.:.. . . :::: :
NP_002 YTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 NEDLELEDAIHTAILTLKESFEG-QMTEDNIEVGICN-EAGFRRLTPTEVKDYLAAIA
.: .: .: : :..: .: : :::... . ... :.: :.. :.: :
NP_002 DEAIETDDL--TIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKE
180 190 200 210 220 230
NP_002 KEENEKKKQKKAS
240
>>NP_001096137 (OMIM: 176846) proteasome subunit alpha t (261 aa)
initn: 416 init1: 209 opt: 496 Z-score: 649.1 bits: 127.6 E(85289): 2.1e-29
Smith-Waterman score: 496; 37.4% identity (67.7% similar) in 235 aa overlap (4-230:3-237)
10 20 30 40 50 60
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
: :. : ::: :.: :.:::. :.. .. .:: : .::.::.:... : ::
NP_001 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEV
10 20 30 40 50
70 80 90 100 110
pF1KB6 SV-HKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQ
.:. ... .. .:. : ::... : .::.: : :::::: ::: . .. :
NP_001 FFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EYTQSGGVRPFGVSLLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY
::: :: :::::::: ::.. . :.:::::: : .:::: .:.: . . ..:.. :
NP_001 AYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 NE-DLELEDAIHTAILTLKESFE-GQMTEDNIEVG-ICNEAG---FRRLTPTEVKDYLAA
.: .. :..:. :: .:..... .... ...:.. . : : .: : ::.. .
NP_001 KEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK
180 190 200 210 220 230
pF1KB6 IA
NP_001 HEEEEAKAEREKKEKEQKEKDK
240 250 260
>>NP_002780 (OMIM: 176846) proteasome subunit alpha type (261 aa)
initn: 416 init1: 209 opt: 496 Z-score: 649.1 bits: 127.6 E(85289): 2.1e-29
Smith-Waterman score: 496; 37.4% identity (67.7% similar) in 235 aa overlap (4-230:3-237)
10 20 30 40 50 60
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
: :. : ::: :.: :.:::. :.. .. .:: : .::.::.:... : ::
NP_002 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEV
10 20 30 40 50
70 80 90 100 110
pF1KB6 SV-HKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQ
.:. ... .. .:. : ::... : .::.: : :::::: ::: . .. :
NP_002 FFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EYTQSGGVRPFGVSLLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY
::: :: :::::::: ::.. . :.:::::: : .:::: .:.: . . ..:.. :
NP_002 AYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 NE-DLELEDAIHTAILTLKESFE-GQMTEDNIEVG-ICNEAG---FRRLTPTEVKDYLAA
.: .. :..:. :: .:..... .... ...:.. . : : .: : ::.. .
NP_002 KEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK
180 190 200 210 220 230
pF1KB6 IA
NP_002 HEEEEAKAEREKKEKEQKEKDK
240 250 260
>>NP_001317605 (OMIM: 176846) proteasome subunit alpha t (261 aa)
initn: 416 init1: 209 opt: 496 Z-score: 649.1 bits: 127.6 E(85289): 2.1e-29
Smith-Waterman score: 496; 37.4% identity (67.7% similar) in 235 aa overlap (4-230:3-237)
10 20 30 40 50 60
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
: :. : ::: :.: :.:::. :.. .. .:: : .::.::.:... : ::
NP_001 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEV
10 20 30 40 50
70 80 90 100 110
pF1KB6 SV-HKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQ
.:. ... .. .:. : ::... : .::.: : :::::: ::: . .. :
NP_001 FFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EYTQSGGVRPFGVSLLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY
::: :: :::::::: ::.. . :.:::::: : .:::: .:.: . . ..:.. :
NP_001 AYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 NE-DLELEDAIHTAILTLKESFE-GQMTEDNIEVG-ICNEAG---FRRLTPTEVKDYLAA
.: .. :..:. :: .:..... .... ...:.. . : : .: : ::.. .
NP_001 KEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK
180 190 200 210 220 230
pF1KB6 IA
NP_001 HEEEEAKAEREKKEKEQKEKDK
240 250 260
>>NP_002782 (OMIM: 602855,608446) proteasome subunit alp (246 aa)
initn: 462 init1: 235 opt: 465 Z-score: 609.2 bits: 120.1 E(85289): 3.4e-27
Smith-Waterman score: 465; 35.6% identity (67.4% similar) in 236 aa overlap (5-234:8-243)
10 20 30 40 50
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVA-GGAPSVGIKAANGVVLATEKKQKSIL
:.. .: ::: :.: :.:::. :. :: ::.... . .:..:.:: . :
NP_002 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 YDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVAS
: .: .. ::..:: :..:: : : :.::: : .. : ::. .: .:.:.
NP_002 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 VMQEYTQSGGVRPFGVSLLICGWNEGR-PYLFQSDPSGAYFAWKATAMGKNYVNGKTFLE
. : :::.. .::.: ... : .: . : ... ::.: : ..:::: : . ... .:::
NP_002 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 KRYNE--DLELEDAIHTAILTLKESFEGQMTEDNIEVGICN--EAGFRRLTPTEVKDYLA
:. .. : .:....::: :. . .. ..::::. . . :: :: .:. .:.
NP_002 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
190 200 210 220 230 240
pF1KB6 AIA
:.:
NP_002 ALAERD
>>NP_002781 (OMIM: 176844) proteasome subunit alpha type (241 aa)
initn: 413 init1: 234 opt: 450 Z-score: 589.8 bits: 116.5 E(85289): 4.1e-26
Smith-Waterman score: 450; 32.5% identity (70.9% similar) in 234 aa overlap (6-233:8-241)
10 20 30 40 50
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYD
:. ...:::: :.: :.:::. :. :. ..::....:: ::.::. : :..
NP_002 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVM
:..:. : ::: ..::. : ..:. .:: .:.....:.: . . ...: :...
NP_002 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 ----QEYTQSGGV-RPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTF
.: .. :.. :::::.::. : .: : ::. ::::.. : :.:. ....
NP_002 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 LEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEA-GFRRLTPTEVKDYLAA
:.. :.... :..::..... ::. .: ... :::.. . . .:. .: :... .
NP_002 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKD
190 200 210 220 230 240
pF1KB6 IA
:
NP_002 I
>>NP_001317602 (OMIM: 176846) proteasome subunit alpha t (174 aa)
initn: 416 init1: 209 opt: 447 Z-score: 588.1 bits: 115.7 E(85289): 5.1e-26
Smith-Waterman score: 447; 44.2% identity (67.9% similar) in 165 aa overlap (4-166:3-167)
10 20 30 40 50 60
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
: :. : ::: :.: :.:::. :.. .. .:: : .::.::.:... : ::
NP_001 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEV
10 20 30 40 50
70 80 90 100 110
pF1KB6 SV-HKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQ
.:. ... .. .:. : ::... : .::.: : :::::: ::: . .. :
NP_001 FFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EYTQSGGVRPFGVSLLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY
::: :: :::::::: ::.. . :.:::::: : .:::: .:.:
NP_001 AYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAWKLQH
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 NEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAAIA
>>NP_002777 (OMIM: 602854) proteasome subunit alpha type (263 aa)
initn: 376 init1: 256 opt: 411 Z-score: 538.6 bits: 107.1 E(85289): 2.9e-23
Smith-Waterman score: 411; 32.9% identity (69.4% similar) in 216 aa overlap (1-212:1-214)
10 20 30 40 50 60
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
: . :. ..:..::.:.. :::::. :: :. .::.:. . .::.. :. .: : ..
NP_002 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE
.:. . .:::. .:. : :.: . :. . .:...:.:...::. ..: :
NP_002 --KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQI
70 80 90 100 110
130 140 150 160 170 180
pF1KB6 YTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNE
:: : ::.::.::: :... :..::. ::. :: .: ..: ...:.::....:
NP_002 PTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSE
120 130 140 150 160 170
190 200 210 220 230
pF1KB6 DLE--LEDAIHTAILTLKESF--EGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAAIA
.: :.. .. .. .:.:.. : ..: :. .::
NP_002 FMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEE
180 190 200 210 220 230
NP_002 RPQRKAQPAQPADEPAEKADEPMEH
240 250 260
>>NP_683877 (OMIM: 602854) proteasome subunit alpha type (269 aa)
initn: 376 init1: 256 opt: 410 Z-score: 537.1 bits: 106.9 E(85289): 3.5e-23
Smith-Waterman score: 410; 33.2% identity (70.1% similar) in 211 aa overlap (6-212:12-220)
10 20 30 40 50
pF1KB6 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKS
:. ..:..::.:.. :::::. :: :. .::.:. . .::.. :. .:
NP_683 MQLSKVKFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRV
: .. .:. . .:::. .:. : :.: . :. . .:...:.:...::. .
NP_683 ELAAHQ--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLI
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 ASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFL
.: : :: : ::.::.::: :... :..::. ::. :: .: ..: ...:.:
NP_683 GSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 EKRYNEDLE--LEDAIHTAILTLKESF--EGQMTEDNIEVGICNEAGFRRLTPTEVKDYL
:....: .: :.. .. .. .:.:.. : ..: :. .::
NP_683 ERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPF
180 190 200 210 220 230
pF1KB6 AAIA
NP_683 LEGLEERPQRKAQPAQPADEPAEKADEPMEH
240 250 260
234 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:31:33 2016 done: Fri Nov 4 11:31:34 2016
Total Scan time: 5.750 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]